Fiber density estimation from single q-shell diffusion imaging by tensor divergence

NeuroImage

Volumn 77, Issue , 2013, Pages 166-176

  Reisert, Marco ^a   Mader, Irina ^a   Umarova, Roza ^a   Maier, Simon ^a   Tebartz van Elst, Ludger ^a   Kiselev, Valerij G ^a  

^a UNIVERSITY OF FREIBURG   (Germany)

Author keywords

DTI; Fiber density; Fiber orientation distribution; HARDI

Indexed keywords

ADULT; AGE; ARTICLE; BRAIN MAPPING; CELL DENSITY; CELLULAR DISTRIBUTION; COMPUTATIONAL FLUID DYNAMICS; CONTROLLED STUDY; CYTOARCHITECTURE; DIFFUSION WEIGHTED IMAGING; FEMALE; HUMAN; HUMAN EXPERIMENT; IMAGE ANALYSIS; IMAGE QUALITY; IN VIVO STUDY; MALE; MATHEMATICAL COMPUTING; MATHEMATICAL MODEL; NEUROANATOMY; NEUROIMAGING; NORMAL HUMAN; PRIORITY JOURNAL; SENSITIVITY ANALYSIS; SEX DIFFERENCE; SINGLE Q SHELL DIFFUSION WEIGHTED IMAGING; TENSOR FIBER DENSITY; WHITE MATTER;

ADULT; BRAIN; BRAIN MAPPING; DIFFUSION MAGNETIC RESONANCE IMAGING; FEMALE; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MALE; MIDDLE AGED; NERVE FIBERS, MYELINATED; YOUNG ADULT;

EID: 84876702650     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2013.03.032     Document Type: Article

References (28)

1. Aboitiz F., Scheibel A., Fisher R., Zaidel E. Fiber composition of the human corpus callosum. Brain Res. 1992, 598(1):143-153.
2. Aganj I., Lenglet C., Jahanshad N., Yacoub E., Harel N., Thompson P., Sapiro G. A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography. Med. Image Anal. 2011, 15(4):414-425.
3. Alexander D.C., Hubbard P.L., Hall M.G., Moore E.A., Ptito M., Parker G.J., Dyrby T.B. Orientationally invariant indices of axon diameter and density from diffusion MRI. Neuroimage 2010, 52:1374-1389.
4. Assaf Y., Blumenfeld-Katzir T., Yovel Y., Basser P. Axcaliber: a method for measuring axon diameter distribution from diffusion MRI. Magn. Reson. Med. 2008, 59:1347-1354.
5. Benjamini Y., Yekutieli D. The control of the false discovery rate in multiple testing under dependency. Ann. Stat. 2001, 29:1165-1188.
6. Burgel U., Amunts K., Hoemke L., Mohlberg H., Gilsbach J., Zilles K. White matter fiber tracts of the human brain: three-dimensional mapping at microscopic resolution, topography and intersubject variability. Neuroimage 2006, 29:1092-1105.
7. Calamante F., Tournier J., Jackson G., Connelly A. Track-density imaging (TDI): super-resolution white matter imaging using whole-brain track-density mapping. Neuroimage 2010, 53.
8. Chung T. Computational Fluid Dynamics 2002, Cambridge University Press.
9. Fieremans E., Jensen J., Helpern J. White matter characterization with diffusional kurtosis imaging. Neuroimage 2011, 58(1):177-188. (Sep).
10. Statistical Parametric Mapping: The Analysis of Functional Brain Images 2007, Elsevier. K.J. Friston, J.T. Ashburner, S.J. Kiebel, T.E. Nichols, W.D. Penny (Eds.).
11. Giorgio A., Santelli L., Tomassini V., Bosnell R., Smith S., Stefano N.D., Johansen-Berg H. Age-related changes in grey and white matter structure throughout adulthood. Neuroimage 2010, 51:943-951.
12. Hong X., Arlinghaus L., Anderson A. Spatial normalization of the fiber orientation distribution based on high angular resolution diffusion imaging data. Magn. Reson. Med. 2009, 61:1520-1527.
13. Jespersen S., Kroenke C., Ostergaard L., Ackerman J., Yablonskiy D. Modeling dendrite density from magnetic resonance diffusion measurements. Neuroimage 2007, 34:1473-1486.
14. Jespersen S., Bjarkam C., Nyengaard J., Chakravarty M., Hansen B., Vosegaard T., Ostergaard L., Yablonskiy D., Nielsen N.C., Vestergaard-Poulsen P. Neurite density from magnetic resonance diffusion measurements at ultrahigh field: comparison with light microscopy and electron microscopy. Neuroimage 2010, 49:205-216.
15. Diffusion MRI: Theory, Methods and Applications 2010, Oxford University Press. D.K. Jones (Ed.).
16. Menzler K., Belke M., Wehrmann E., Krakow K., Lengler U., Jansen A., Hamer H., Oertel W., Rosenow F., Knake S. Men and women are different: diffusion tensor imaging reveals sexual dimorphism in the microstructure of the thalamus, corpus callosum and cingulum. Neuroimage 2011, 54:2557-2562.
17. Michailovich O. Spatially regularized compressed sensing for high angular resolution diffusion imaging. IEEE Trans. Med. Imaging 2011, 30:1100-1115.
18. Raffelt D., Tournier J.-D., Rosef S., Ridgwaye G.R., Hendersong R., Crozier S., Salvad O., Connelly A. Apparent fibre density: a novel measure for the analysis of diffusion-weighted magnetic resonance images. Neuroimage 2012, 59:3976-3994.
19. Reisert M., Kiselev V. Fiber continuity: an anisotropic prior for ODF estimation. IEEE Trans. Med. Imaging 2011, 30(6):1274-1283. (June).
20. Reisert M., Mader I., Anastasopoulos C., Weigel M., Schnell S., Kiselev V. Global fiber reconstruction becomes practical. Neuroimage 2011, 54(2):955-962.
21. Reisert M., Skibbe H., Kiselev V. Fiber density estimation by tensor divergence. Medical Image Computing and Computer-Assisted Intervention-MICCAI 2012, 297-304.
22. Roberts T., Liu F., Kassner A., Mori S., Guha A. AJNR Am. J. Neuroradiol. 2005, 26:2183-2186.
23. Stikov N., Perry L.M., Mezer A., Rykhlevskaia E., Wandell B.A., Pauly J.M., Dougherty R.F. Bound pool fractions complement diffusion measures to describe white matter micro and macrostructure. Neuroimage 2011, 54:1112-1121.
24. Tournier J.D., Calamante F., Gadian D.G., Connelly A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. Neuroimage 2004, 23(3):1176-1185.
25. Tournier J., Calamante F., Gadian D., Connelly A. Robust determination of the fibre orientation distribution in diffusion MRI: non-negativity constrained super-resolved spherical deconvolution. Neuroimage 2007, 35(4):1459-1472.
26. Tuch D.S. Q-ball imaging. Magn. Reson. Med. 2004, 52(6):1358-1372. (English 0740-3194).
27. Zaitsev M., Hennig J., Speck O. Point spread function mapping with parallel imaging techniques and high acceleration factors: fast, robust, and flexible method for echo-planar imaging distortion correction. Magn. Reson. Med. 2004, 52(5):1156-1166.
28. Zhang H., Schneider T., W.-K.C.A.M., Alexander D. NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain. Neuroimage 2011, 61:1000-1016.