Biological nitrification inhibition (BNI) activity in sorghum and its characterization

Plant and Soil

Volumn 366, Issue 1-2, 2013, Pages 243-259

  Subbarao, G V ^a   Nakahara, K ^a   Ishikawa, T ^a   Ono, H ^b   Yoshida, M ^b   Yoshihashi, T ^a   Zhu, Yiyong ^c   Zakir, H A K M ^d   Deshpande, S P ^e   Hash, C T ^e   Sahrawat, K L ^e  

^a JAPAN INTERNATIONAL RESEARCH CENTER FOR AGRICULTURAL SCIENCES   (Japan)

^b NATIONAL FOOD RESEARCH INSTITUTE   (Japan)

^c NANJING AGRICULTURAL UNIVERSITY   (China)

^d BANGLADESH AGRICULTURAL UNIVERSITY   (Bangladesh)

^e INTERNATIONAL CROPS RESEARCH INSTITUTE FOR THE SEMI ARID TROPICS ICRISAT   (India)

Author keywords

Activity guided isolation; Ammonia monooxygenase (AMO); Biological nitrification inhibition (BNI); BNI compounds; HAO (hydroxylamine oxidoreductase); Hydrophilic and hydrophobic nitrification inhibitors; Sakuranetin; Sorghum; Sorgoleone

Indexed keywords

BIOASSAY; BIOLUMINESCENCE; ENZYME ACTIVITY; EXUDATION; HYDROPHOBICITY; INHIBITION; INHIBITOR; MASS SPECTROMETRY; NITRIFICATION; NITRIFYING BACTERIUM; NITROGEN; NUTRIENT USE EFFICIENCY; RECOMBINATION; RHIZOSPHERE; SORGHUM;

NITROSOMONAS; NITROSOMONAS EUROPAEA;

EID: 84876425045     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11104-012-1419-9     Document Type: Article

References (46)

1. Atkinson P, Blakeman JP (1982) Seasonal occurrence of an antimicrobial flavanone, sakuranetin, associated with glands on leaves of Ribes Nigrum. New Phytol 92: 63-74.
2. Barbosa LCA, Ferreira ML, Demuner AJ, Alberto da Silva A, Pereira RC (2001) Preparation and phytotoxicity of sorgoleone analogues. Quim Nova 24: 751-755.
3. Belser LW (1979) Population ecology of nitrifying bacteria. Annu Rev Microbiol 33: 309-333.
4. Bock E, Koops HP, Harms H, Ahlers B (1991) The biochemistry of nitrifying organisms. In: Shivly JM, Barton LL (eds) Variations in autotrophic life. Academic, San Diego, pp 171-200.
5. Bouwmeester HJ, Roux C, Lopez-Raez JA, Becard G (2007) Rhizosphere communication of plants, parasitic plants and AM fungi. Trends Plant Sci 12: 224-230.
6. Burford JR, Sahrawat KL (eds) (1989) Management of Vertisols for improved agricultural production: proceedings of an IBSRAM inaugural workshop, 18-22 February 1985, ICRISAT Center, Patancheru, India. ICRISAT, Patancheru 502 324, Andhra Pradesh, India, pp 278.
7. Chang M, Netzly DH, Butler LG, Lynn DG (1986) Chemical regulation of distance: characterization of the first natural host germination stimulant for Striga asiatica. J Am Chem Soc 108: 7858-7860.
8. Czarnota MA, Paul RN, Dayan FE, Nimbal CI, Weston LA (2001) Mode of action, localization and production, chemical nature, and activity of sorgoleone: a potent PSII inhibitor in Sorghum spp. root exudates. Weed Technol 15: 813-825.
9. Dayan FE, Howell J, Weidenhamer JD (2009) Dynamic root exudation of sorgoleone and its in Planta mechanism of action. J Exp Bot 60: 2107-2117.
10. Dayan FE, Rimando AM, Pan Z, Baerson SR, Gimsing AL, Duke SO (2010) Sorgoleone. Phytochemistry 71: 1032-1039.
11. Einhellig FA, Souza IF (1992) Phytotoxicity of sorgoleone found in grain sorghum root exudates. J Chem Ecol 18: 1-11.
12. Erikson J, Schott D, Reverri T, Muhsin W, Ruttledge T (2001) GC-MS analysis of hydrophobic root exudates of sorghum and implication on the parasitic plant Striga asiatica. J Agric Food Chem 49: 5537-5542.
13. Fillery IRP (2007) Plant-based manipulation of nitrification in soil: a new approach to managing N loss? Plant Soil 294: 1-4.
14. Galloway JN, Townsend AR, Erisman JW, Bekunda M, Cai Z, Freney JR, Martinelli LA, Seitzinger SP, Sutton MA (2008) Transformation of the nitrogen cycle: recent trends, questions and potential solutions. Science 320: 889-892.
15. Gopalakrishnan S, Watanabe T, Pearse SJ, Ito O, Hossain ZAKM, Subbarao GV (2009) Biological nitrification inhibition by Brachiaria humidicola roots varies with soil type and inhibits nitrifying bacteria, but not other major soil microorganisms. Soil Sci Plant Nutr 55: 725-733.
16. Goring CAI (1962a) Control of nitrification of ammonium fertilizers and urea by 2-chloro-6-(trichloromethyl)-pyridine. Soil Sci 93: 211-218.
17. Goring CAI (1962b) Control of nitrification by 2-chloro-6-(trichloromethyl)-pyridine. Soil Sci 93: 431-439.
18. Hooper AB, Vannelli T, Bergmann DJ, Arciero DM (1997) Enzymology of the oxidation of ammonia to nitrite by bacteria. Anton Leeuw 71: 59-67.
19. Hossain AKMZ, Subbarao GV, Pearse SJ, Gopalakrishnan S, Ito O, Ishikawa T, Kawano N, Nakahara K, Yoshihashi T, Ono H, Yoshida M (2008) Detection, isolation and characterization of a root-exuded compound, methyl 3-(4-hydroxyphenyl) propionate, responsible for biological nitrification inhibition by sorghum (Sorghum biolor). New Phytol 180: 442-451.
20. Hyman MR, Murton IB, Arp DJ (1988) Interaction of ammonia monooxygenase from Nitrosomonas europaea with alkanes, alkenes and alkynes. Appl Environ Microbiol 54: 3187-3190.
21. Kodama O, Miyakawa J, Akatsuka T, Kiyosawa S (1992) Sakuranetin, a flavanone phytoalexin from ultraviolet-irradiated rice leaves. Phytochemistry 31: 3807-3809.
22. Litchfield MD (1967) The automated analysis of nitrite and nitrate in blood. Analyst (Lond) 92: 132-136.
23. Logan MSP, Hooper AB (1995) Suicide inactivation of hydroxylamine oxidoreductase of Nitrosomonas europaea by organohydrazines. Biochemistry 34: 9257-9264.
24. McCarty GW (1999) Modes of action of nitrification inhibitors. Biol Fertil Soils 29: 1-9.
25. McTavish H, Arciero DM, Hooper AB (1995) Interaction with membranes of cytochrome c554 from Nitrosomonas europaea. Arch Biochem Biophys 324: 53-58.
26. Mosier AR, Duxbury JM, Freney JR, Heinemeyer O, Minami K (1996) Nitrous oxide emissions from agricultural fields: assessment, measurement, and mitigation. Plant Soil 181: 95-108.
27. Netzly DH, Butler LG (1986) Roots of sorghum exudates hydrophobic droplets containing biologically active components. Crop Sci 26: 775-778.
28. Netzly DH, Riopel JL, Ejeta G, Butler LG (1988) Germination stimulants of witchweed (Striga asiatica) from hydrophobic root exudates of sorghum (Sorghum bicolor). Weed Sci 36: 441-446.
29. Norton JM, Alzerreca JJ, Suwa Y, Klotz MG (2002) Diversity of ammonia monooxygenase operon in autotrophic ammonia oxidizing bacteria. Arch Microbiol 177: 139-149.
30. Raun WR, Johnson GV (1999) Improving nitrogen use efficiency for cereal production. Agron J 91: 357-363.
31. Rottenberg H, Hashimoto K (1986) Fatty acid uncoupling of oxidative phosphorylation in rat liver mitochondria. Biochem 25: 1747-1755.
32. Sahrawat KL (1996) Nitrification inhibitors, with emphasis on natural products, and the persistence of fertilizer nitrogen in the soil. In: Ahmad N (ed) Nitrogen economy in tropical soils. Kluwer Academic Publishers, Dordrecht, pp 379-388.
33. Sahrawat KL, Keeney DR (1985) Perspectives for research on development of nitrification inhibitors. Commun Soil Sci Plant Anal 16: 517-524.
34. Schlesinger WH (2009) On the fate of anthropogenic nitrogen. Proc Natl Acad Sci (USA) 106: 203-208.
35. Slangen J, Kerkhoff P (1984) Nitrification inhibitors in agriculture and horticulture: a literature review. Fert Res 5: 1-76.
36. Subbarao GV, Ito O, Sahrawat KL, Berry WL, Nakahara K, Ishikawa T, Watanabe T, Suenaga K, Rondon M, Rao IM (2006a) Scope and strategies for regulation of nitrification in agricultural systems - Challenges and opportunities. Crit Rev Plant Sci 25: 303-335.
37. Subbarao GV, Ishikawa T, Ito O, Nakahara K, Wang HY, Berry WL (2006b) A bioluminescence assay to detect nitrification inhibitors released from plant roots: a case study with Brachiaria humidicola. Plant Soil 288: 101-112.
38. + triggers the synthesis and release of biological nitrification inhibition compounds in Brachiaria humidicola roots. Plant Soil 290: 245-257.
39. Subbarao GV, Rondon M, Ito O, Ishikawa T, Rao IM, Nakahara K, Lascano C, Berry WL (2007b) Biological nitrification inhibition (BNI) - Is it a widespread phenomenon? Plant Soil 294: 5-18.
40. Subbarao GV, Ban T, Masahiro K, Ito O, Samejima H, Wang HY, Pearse SJ, Gopalakrishnan S, Nakahara K, Hossain AKMZ, Tsujimoto H, Berry WL (2007c) Can biological nitrification inhibition (BNI) genes from perennial Leymus racemosus (Triticeae) combat nitrification in wheat farming? Plant Soil 299: 55-64.
41. Subbarao GV, Nakahara K, Ishikawa T, Yoshihashi T, Ito O, Ono H, Ohnishi-Kameyama M, Yoshida M, Kawano N, Berry WL (2008) Free fatty acids from the pasture grass Brachiaria humidicola and one of their methyl esters as inhibitors of nitrification. Plant Soil 313: 89-99.
42. Subbarao GV, Nakahara K, Hurtado MP, Ono H, Moreta DE, Salcedo AF, Yoshihashi AT, Ishikawa T, Ishitani M, Ohnishi-Kameyama M, Yoshida M, Rondon M, Rao IM, Lascano CE, Berry WL, Ito O (2009a) Evidence for biological nitrification inhibition in Brachiaria pastures. Proc Nat Acad Sci (USA) 106: 17302-17307.
43. Subbarao GV, Kishii M, Nakahara K, Ishikawa T, Ban T, Tsujimoto H, George TS, Berry WL, Hash CT, Ito O (2009b) Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in the Triticeae? Breed Sci 59: 529-545.
44. Subbarao GV, Sahrawat KL, Nakahara K, Ishikawa T, Kishii M, Rao IM, Hash CT, George TS, Srinivasa rao P, Nardi P, Bonnett D, Berry W, Suenaga K, Lata JC (2012) Biological nitrification inhibition (BNI) - A novel strategy to regulate nitrification in agricultural systems. Adv Agron 114: 249-302.
45. Ward BB, Courtney KJ, Langerheim JH (1997) Inhibition of Nitrosomonas europaea by monoterpenes from coastal redwood (Sequoia sempervirens) in whole-cell studies. J Chem Ecol 23: 2583-2598.
46. +-ATPase determine the release of BNIs in sorghum roots - possible mechanisms and underlying hypothesis. Plant Soil. doi: 10. 1007/s11104-012-1151-5.