-
1
-
-
79953787641
-
Degringolade, a SUMO-targeted ubiquitin ligase, inhibits Hairy/Groucho-mediated repression
-
Abed, M., K.C. Barry, D. Kenyagin, B. Koltun, T.M. Phippen, J.J. Delrow, S.M. Parkhurst, and A. Orian. 2011. Degringolade, a SUMO-targeted ubiquitin ligase, inhibits Hairy/Groucho-mediated repression. EMBO J. 30:1289-1301. http://dx.doi.org/10.1038/emboj.2011.42
-
(2011)
EMBO J
, vol.30
, pp. 1289-1301
-
-
Abed, M.1
Barry, K.C.2
Kenyagin, D.3
Koltun, B.4
Phippen, T.M.5
Delrow, J.J.6
Parkhurst, S.M.7
Orian, A.8
-
2
-
-
76749109388
-
Yeast as a model system to study RecQ helicase function
-
Ashton, T.M., and I.D. Hickson. 2010. Yeast as a model system to study RecQ helicase function. DNA Repair (Amst.). 9:303-314. http://dx.doi.org/10.1016/j.dnarep.2009.12.007
-
(2010)
DNA Repair (Amst.)
, vol.9
, pp. 303-314
-
-
Ashton, T.M.1
Hickson, I.D.2
-
3
-
-
78649705725
-
Quantitative analysis of fitness and genetic interactions in yeast on a genome scale
-
Baryshnikova, A., M. Costanzo, Y. Kim, H. Ding, J. Koh, K. Toufighi, J.Y. Youn, J. Ou, B.J. San Luis, S. Bandyopadhyay, et al. 2010. Quantitative analysis of fitness and genetic interactions in yeast on a genome scale. Nat. Methods. 7:1017-1024. http://dx.doi.org/10.1038/nmeth.1534
-
(2010)
Nat. Methods
, vol.7
, pp. 1017-1024
-
-
Baryshnikova, A.1
Costanzo, M.2
Kim, Y.3
Ding, H.4
Koh, J.5
Toufighi, K.6
Youn, J.Y.7
Ou, J.8
San Luis, B.J.9
Bandyopadhyay, S.10
-
4
-
-
0037033071
-
Identification of a multifunctional binding site on Ubc9p required for Smt3p conjugation
-
Bencsath, K.P., M.S. Podgorski, V.R. Pagala, C.A. Slaughter, and B.A. Schulman. 2002. Identification of a multifunctional binding site on Ubc9p required for Smt3p conjugation. J. Biol. Chem. 277:47938-47945. http://dx.doi.org/10.1074/jbc.M207442200
-
(2002)
J. Biol. Chem
, vol.277
, pp. 47938-47945
-
-
Bencsath, K.P.1
Podgorski, M.S.2
Pagala, V.R.3
Slaughter, C.A.4
Schulman, B.A.5
-
5
-
-
0034754698
-
Genes involved in sister chromatid separation and segregation in the budding yeast Saccharomyces cerevisiae
-
Biggins, S., N. Bhalla, A. Chang, D.L. Smith, and A.W. Murray. 2001. Genes involved in sister chromatid separation and segregation in the budding yeast Saccharomyces cerevisiae. Genetics. 159:453-470.
-
(2001)
Genetics
, vol.159
, pp. 453-470
-
-
Biggins, S.1
Bhalla, N.2
Chang, A.3
Smith, D.L.4
Murray, A.W.5
-
6
-
-
37349111022
-
Template switching: from replication fork repair to genome rearrangements
-
Branzei, D., and M. Foiani. 2007. Template switching: from replication fork repair to genome rearrangements. Cell. 131:1228-1230. http://dx.doi.org/10.1016/j.cell.2007.12.007
-
(2007)
Cell
, vol.131
, pp. 1228-1230
-
-
Branzei, D.1
Foiani, M.2
-
7
-
-
33750437743
-
Ubc9- and mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks
-
Branzei, D., J. Sollier, G. Liberi, X. Zhao, D. Maeda, M. Seki, T. Enomoto, K. Ohta, and M. Foiani. 2006. Ubc9- and mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks. Cell. 127:509-522. http://dx.doi.org/10.1016/j.cell.2006.08.050
-
(2006)
Cell
, vol.127
, pp. 509-522
-
-
Branzei, D.1
Sollier, J.2
Liberi, G.3
Zhao, X.4
Maeda, D.5
Seki, M.6
Enomoto, T.7
Ohta, K.8
Foiani, M.9
-
8
-
-
79551604903
-
Purification and identification of endogenous poly-SUMO conjugates
-
Bruderer, R., M.H. Tatham, A. Plechanovova, I. Matic, A.K. Garg, and R.T. Hay. 2011. Purification and identification of endogenous poly-SUMO conjugates. EMBO Rep. 12:142-148. http://dx.doi.org/10.1038/embor.2010.206
-
(2011)
EMBO Rep
, vol.12
, pp. 142-148
-
-
Bruderer, R.1
Tatham, M.H.2
Plechanovova, A.3
Matic, I.4
Garg, A.K.5
Hay, R.T.6
-
9
-
-
0242414786
-
The SUMO isopeptidase Ulp2 prevents accumulation of SUMO chains in yeast
-
Bylebyl, G.R., I. Belichenko, and E.S. Johnson. 2003. The SUMO isopeptidase Ulp2 prevents accumulation of SUMO chains in yeast. J. Biol. Chem. 278:44113-44120. http://dx.doi.org/10.1074/jbc.M308357200
-
(2003)
J. Biol. Chem
, vol.278
, pp. 44113-44120
-
-
Bylebyl, G.R.1
Belichenko, I.2
Johnson, E.S.3
-
10
-
-
84866368760
-
SUMO, a heavyweight player in plant abiotic stress responses
-
Castro, P.H., R.M. Tavares, E.R. Bejarano, and H. Azevedo. 2012. SUMO, a heavyweight player in plant abiotic stress responses. Cell. Mol. Life Sci. 69:3269-3283. http://dx.doi.org/10.1007/s00018-012-1094-2
-
(2012)
Cell. Mol. Life Sci
, vol.69
, pp. 3269-3283
-
-
Castro, P.H.1
Tavares, R.M.2
Bejarano, E.R.3
Azevedo, H.4
-
11
-
-
79958212812
-
Perinuclear cohibin complexes maintain replicative life span via roles at distinct silent chromatin domains
-
Chan, J.N., B.P. Poon, J. Salvi, J.B. Olsen, A. Emili, and K. Mekhail. 2011. Perinuclear cohibin complexes maintain replicative life span via roles at distinct silent chromatin domains. Dev. Cell. 20:867-879. http://dx.doi.org/10.1016/j.devcel.2011.05.014
-
(2011)
Dev. Cell
, vol.20
, pp. 867-879
-
-
Chan, J.N.1
Poon, B.P.2
Salvi, J.3
Olsen, J.B.4
Emili, A.5
Mekhail, K.6
-
12
-
-
77951230659
-
Sumoylation and the structural maintenance of chromosomes (Smc) 5/6 complex slow senescence through recombination intermediate resolution
-
Chavez, A., V. George, V. Agrawal, and F.B. Johnson. 2010. Sumoylation and the structural maintenance of chromosomes (Smc) 5/6 complex slow senescence through recombination intermediate resolution. J. Biol. Chem. 285:11922-11930. http://dx.doi.org/10.1074/jbc.M109.041277
-
(2010)
J. Biol. Chem
, vol.285
, pp. 11922-11930
-
-
Chavez, A.1
George, V.2
Agrawal, V.3
Johnson, F.B.4
-
13
-
-
35048872745
-
Topoisomerase I-dependent viability loss in saccharomyces cerevisiae mutants defective in both SUMO conjugation and DNA repair
-
Chen, X.L., H.R. Silver, L. Xiong, I. Belichenko, C. Adegite, and E.S. Johnson. 2007. Topoisomerase I-dependent viability loss in saccharomyces cerevisiae mutants defective in both SUMO conjugation and DNA repair. Genetics. 177:17-30. http://dx.doi.org/10.1534/genetics.107.074708
-
(2007)
Genetics
, vol.177
, pp. 17-30
-
-
Chen, X.L.1
Silver, H.R.2
Xiong, L.3
Belichenko, I.4
Adegite, C.5
Johnson, E.S.6
-
14
-
-
0024392359
-
Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle
-
Conconi, A., R.M. Widmer, T. Koller, and J.M. Sogo. 1989. Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle. Cell. 57:753-761. http://dx.doi.org/10.1016/0092-8674(89)90790-3
-
(1989)
Cell
, vol.57
, pp. 753-761
-
-
Conconi, A.1
Widmer, R.M.2
Koller, T.3
Sogo, J.M.4
-
15
-
-
75649111192
-
The genetic landscape of a cell
-
Costanzo, M., A. Baryshnikova, J. Bellay, Y. Kim, E.D. Spear, C.S. Sevier, H. Ding, J.L. Koh, K. Toufighi, S. Mostafavi, et al. 2010. The genetic landscape of a cell. Science. 327:425-431. http://dx.doi.org/10.1126/science.1180823
-
(2010)
Science
, vol.327
, pp. 425-431
-
-
Costanzo, M.1
Baryshnikova, A.2
Bellay, J.3
Kim, Y.4
Spear, E.D.5
Sevier, C.S.6
Ding, H.7
Koh, J.L.8
Toufighi, K.9
Mostafavi, S.10
-
16
-
-
84862783021
-
Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint
-
Cremona, C.A., P. Sarangi, Y. Yang, L.E. Hang, S. Rahman, and X. Zhao. 2012. Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint. Mol. Cell. 45:422-432. http://dx.doi.org/10.1016/j.molcel.2011.11.028
-
(2012)
Mol. Cell
, vol.45
, pp. 422-432
-
-
Cremona, C.A.1
Sarangi, P.2
Yang, Y.3
Hang, L.E.4
Rahman, S.5
Zhao, X.6
-
17
-
-
50049126078
-
Identification of cis-acting sites for condensin loading onto budding yeast chromosomes
-
D'Ambrosio, C., C.K. Schmidt, Y. Katou, G. Kelly, T. Itoh, K. Shirahige, and F. Uhlmann. 2008. Identification of cis-acting sites for condensin loading onto budding yeast chromosomes. Genes Dev. 22:2215-2227. http://dx.doi.org/10.1101/gad.1675708
-
(2008)
Genes Dev
, vol.22
, pp. 2215-2227
-
-
D'Ambrosio, C.1
Schmidt, C.K.2
Katou, Y.3
Kelly, G.4
Itoh, T.5
Shirahige, K.6
Uhlmann, F.7
-
18
-
-
0029112540
-
Transcription in the yeast rRNA gene locus: distribution of the active gene copies and chromatin structure of their flanking regulatory sequences
-
Dammann, R., R. Lucchini, T. Koller, and J.M. Sogo. 1995. Transcription in the yeast rRNA gene locus: distribution of the active gene copies and chromatin structure of their flanking regulatory sequences. Mol. Cell. Biol. 15:5294-5303.
-
(1995)
Mol. Cell. Biol
, vol.15
, pp. 5294-5303
-
-
Dammann, R.1
Lucchini, R.2
Koller, T.3
Sogo, J.M.4
-
19
-
-
0024416229
-
Transformation of Saccharomyces cerevisiae by electroporation
-
Delorme, E. 1989. Transformation of Saccharomyces cerevisiae by electroporation. Appl. Environ. Microbiol. 55:2242-2246.
-
(1989)
Appl. Environ. Microbiol
, vol.55
, pp. 242-2246
-
-
Delorme, E.1
-
20
-
-
15944414509
-
A proteomic strategy for gaining insights into protein sumoylation in yeast
-
Denison, C., A.D. Rudner, S.A. Gerber, C.E. Bakalarski, D. Moazed, and S.P. Gygi. 2005. A proteomic strategy for gaining insights into protein sumoylation in yeast. Mol. Cell. Proteomics. 4:246-254. http://dx.doi.org/10.1074/mcp.M400154-MCP200
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 246-254
-
-
Denison, C.1
Rudner, A.D.2
Gerber, S.A.3
Bakalarski, C.E.4
Moazed, D.5
Gygi, S.P.6
-
21
-
-
78049234670
-
Proteome-wide screens for small ubiquitinlike modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes
-
Elrouby, N., and G. Coupland. 2010. Proteome-wide screens for small ubiquitinlike modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Proc. Natl. Acad. Sci. USA. 107:17415-17420. http://dx.doi.org/10.1073/pnas.1005452107
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 17415-17420
-
-
Elrouby, N.1
Coupland, G.2
-
22
-
-
38349174998
-
Ulp2 and the DNA damage response: desumoylation enables safe passage through mitosis
-
Felberbaum, R., and M. Hochstrasser. 2008. Ulp2 and the DNA damage response: desumoylation enables safe passage through mitosis. Cell Cycle. 7:52-56. http://dx.doi.org/10.4161/cc.7.1.5218
-
(2008)
Cell Cycle
, vol.7
, pp. 52-56
-
-
Felberbaum, R.1
Hochstrasser, M.2
-
23
-
-
79960004074
-
The PIAS homologue Siz2 regulates perinuclear telomere position and telomerase activity in budding yeast
-
Ferreira, H.C., B. Luke, H. Schober, V. Kalck, J. Lingner, and S.M. Gasser. 2011. The PIAS homologue Siz2 regulates perinuclear telomere position and telomerase activity in budding yeast. Nat. Cell Biol. 13:867-874. http://dx.doi.org/10.1038/ncb2263
-
(2011)
Nat. Cell Biol
, vol.13
, pp. 867-874
-
-
Ferreira, H.C.1
Luke, B.2
Schober, H.3
Kalck, V.4
Lingner, J.5
Gasser, S.M.6
-
24
-
-
84856621090
-
The Sumotargeted ubiquitin ligase RNF4 regulates the localization and function of the HTLV-1 oncoprotein Tax
-
Fryrear, K.A., X. Guo, O. Kerscher, and O.J. Semmes. 2012. The Sumotargeted ubiquitin ligase RNF4 regulates the localization and function of the HTLV-1 oncoprotein Tax. Blood. 119:1173-1181. http://dx.doi.org/10.1182/blood-2011-06-358564
-
(2012)
Blood
, vol.119
, pp. 1173-1181
-
-
Fryrear, K.A.1
Guo, X.2
Kerscher, O.3
Semmes, O.J.4
-
25
-
-
84861765707
-
RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair
-
Galanty, Y., R. Belotserkovskaya, J. Coates, and S.P. Jackson. 2012. RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair. Genes Dev. 26:1179-1195. http://dx.doi.org/10.1101/gad.188284.112
-
(2012)
Genes Dev
, vol.26
, pp. 1179-1195
-
-
Galanty, Y.1
Belotserkovskaya, R.2
Coates, J.3
Jackson, S.P.4
-
26
-
-
69249203574
-
SUMO association with repressor complexes, emerging routes for transcriptional control
-
Garcia-Dominguez, M., and J.C. Reyes. 2009. SUMO association with repressor complexes, emerging routes for transcriptional control. Biochim. Biophys. Acta. 1789:451-459. http://dx.doi.org/10.1016/j.bbagrm.2009.07.001
-
(2009)
Biochim. Biophys. Acta
, vol.1789
, pp. 451-459
-
-
Garcia-Dominguez, M.1
Reyes, J.C.2
-
27
-
-
0033637153
-
Genomic expression programs in the response of yeast cells to environmental changes
-
Gasch, A.P., P.T. Spellman, C.M. Kao, O. Carmel-Harel, M.B. Eisen, G. Storz, D. Botstein, and P.O. Brown. 2000. Genomic expression programs in the response of yeast cells to environmental changes. Mol. Biol. Cell. 11: 4241-4257.
-
(2000)
Mol. Biol. Cell
, vol.11
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
28
-
-
0036270543
-
Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method
-
Gietz, R.D., and R.A. Woods. 2002. Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method. Methods Enzymol. 350:87-96. http://dx.doi.org/10.1016/S0076-6879(02)50957-5
-
(2002)
Methods Enzymol
, vol.350
, pp. 87-96
-
-
Gietz, R.D.1
Woods, R.A.2
-
29
-
-
24344445216
-
Something about SUMO inhibits transcription
-
Gill, G. 2005. Something about SUMO inhibits transcription. Curr. Opin. Genet. Dev. 15:536-541. http://dx.doi.org/10.1016/j.gde.2005.07.004
-
(2005)
Curr. Opin. Genet. Dev
, vol.15
, pp. 536-541
-
-
Gill, G.1
-
30
-
-
33344463137
-
DNA repeat rearrangements mediated by DnaK-dependent replication fork repair
-
Goldfless, S.J., A.S. Morag, K.A. Belisle, V.A. Sutera Jr., and S.T. Lovett. 2006. DNA repeat rearrangements mediated by DnaK-dependent replication fork repair. Mol. Cell. 21:595-604. http://dx.doi.org/10.1016/j.molcel.2006.01.025
-
(2006)
Mol. Cell
, vol.21
, pp. 595-604
-
-
Goldfless, S.J.1
Morag, A.S.2
Belisle, K.A.3
Sutera Jr., V.A.4
Lovett, S.T.5
-
31
-
-
84863112760
-
SUMO conjugation is required for the assembly of Drosophila Su(Hw) and Mod(mdg4) into insulator bodies that facilitate insulator complex formation
-
Golovnin, A., I. Volkov, and P. Georgiev. 2012. SUMO conjugation is required for the assembly of Drosophila Su(Hw) and Mod(mdg4) into insulator bodies that facilitate insulator complex formation. J. Cell Sci. 125:2064-2074. http://dx.doi.org/10.1242/jcs.100172
-
(2012)
J. Cell Sci
, vol.125
, pp. 2064-2074
-
-
Golovnin, A.1
Volkov, I.2
Georgiev, P.3
-
32
-
-
0028174255
-
Chromosome condensation and sister chromatid pairing in budding yeast
-
Guacci, V., E. Hogan, and D. Koshland. 1994. Chromosome condensation and sister chromatid pairing in budding yeast. J. Cell Biol. 125:517-530. http://dx.doi.org/10.1083/jcb.125.3.517
-
(1994)
J. Cell Biol
, vol.125
, pp. 517-530
-
-
Guacci, V.1
Hogan, E.2
Koshland, D.3
-
33
-
-
15944406765
-
SUMO: a history of modification
-
Hay, R.T. 2005. SUMO: a history of modification. Mol. Cell. 18:1-12. http://dx.doi.org/10.1016/j.molcel.2005.03.012
-
(2005)
Mol. Cell
, vol.18
, pp. 1-12
-
-
Hay, R.T.1
-
34
-
-
31844456472
-
Replication fork reactivation downstream of a blocked nascent leading strand
-
Heller, R.C., and K.J. Marians. 2006. Replication fork reactivation downstream of a blocked nascent leading strand. Nature. 439:557-562. http://dx.doi.org/10.1038/nature04329
-
(2006)
Nature
, vol.439
, pp. 557-562
-
-
Heller, R.C.1
Marians, K.J.2
-
35
-
-
80052870830
-
Processing of homologous recombination repair intermediates by the Sgs1-Top3-Rmi1 and Mus81-Mms4 complexes
-
Hickson, I.D., and H.W. Mankouri. 2011. Processing of homologous recombination repair intermediates by the Sgs1-Top3-Rmi1 and Mus81-Mms4 complexes. Cell Cycle. 10:3078-3085. http://dx.doi.org/10.4161/cc.10.18.16919
-
(2011)
Cell Cycle
, vol.10
, pp. 3078-3085
-
-
Hickson, I.D.1
Mankouri, H.W.2
-
36
-
-
0034725918
-
Biochemistry. All in the ubiquitin family
-
Hochstrasser, M. 2000. Biochemistry. All in the ubiquitin family. Science. 289:563-564. http://dx.doi.org/10.1126/science.289.5479.563
-
(2000)
Science
, vol.289
, pp. 563-564
-
-
Hochstrasser, M.1
-
37
-
-
71149097450
-
Control of high osmolarity signalling in the yeast Saccharomyces cerevisiae
-
Hohmann, S. 2009. Control of high osmolarity signalling in the yeast Saccharomyces cerevisiae. FEBS Lett. 583:4025-4029. http://dx.doi.org/10.1016/j.febslet.2009.10.069
-
(2009)
FEBS Lett
, vol.583
, pp. 4025-4029
-
-
Hohmann, S.1
-
38
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh, W.K., J.V. Falvo, L.C. Gerke, A.S. Carroll, R.W. Howson, J.S. Weissman, and E.K. O'Shea. 2003. Global analysis of protein localization in budding yeast. Nature. 425:686-691. http://dx.doi.org/10.1038/nature02026
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
Falvo, J.V.2
Gerke, L.C.3
Carroll, A.S.4
Howson, R.W.5
Weissman, J.S.6
O'Shea, E.K.7
-
39
-
-
36749009119
-
PHD domain-mediated E3 ligase activity directs intramolecular sumoylation of an adjacent bromodomain required for gene silencing
-
Ivanov, A.V., H. Peng, V. Yurchenko, K.L. Yap, D.G. Negorev, D.C. Schultz, E. Psulkowski, W.J. Fredericks, D.E. White, G.G. Maul, et al. 2007. PHD domain-mediated E3 ligase activity directs intramolecular sumoylation of an adjacent bromodomain required for gene silencing. Mol. Cell. 28:823-837. http://dx.doi.org/10.1016/j.molcel.2007.11.012
-
(2007)
Mol. Cell
, vol.28
, pp. 823-837
-
-
Ivanov, A.V.1
Peng, H.2
Yurchenko, V.3
Yap, K.L.4
Negorev, D.G.5
Schultz, D.C.6
Psulkowski, E.7
Fredericks, W.J.8
White, D.E.9
Maul, G.G.10
-
40
-
-
76749166648
-
An improved SUMmOn-based methodology for the identification of ubiquitin and ubiquitin-like protein conjugation sites identifies novel ubiquitin-like protein chain linkages
-
Jeram, S.M., T. Srikumar, X.D. Zhang, H. Anne Eisenhauer, R. Rogers, P.G. Pedrioli, M. Matunis, and B. Raught. 2010. An improved SUMmOn-based methodology for the identification of ubiquitin and ubiquitin-like protein conjugation sites identifies novel ubiquitin-like protein chain linkages. Proteomics. 10:254-265. http://dx.doi.org/10.1002/pmic.200900648
-
(2010)
Proteomics
, vol.10
, pp. 254-265
-
-
Jeram, S.M.1
Srikumar, T.2
Zhang, X.D.3
Anne Eisenhauer, H.4
Rogers, R.5
Pedrioli, P.G.6
Matunis, M.7
Raught, B.8
-
41
-
-
3943099375
-
Protein modification by SUMO
-
Johnson, E.S. 2004. Protein modification by SUMO. Annu. Rev. Biochem. 73:355-382. http://dx.doi.org/10.1146/annurev.biochem.73.011303.074118
-
(2004)
Annu. Rev. Biochem
, vol.73
, pp. 355-382
-
-
Johnson, E.S.1
-
42
-
-
63649098077
-
The cis element and factors required for condensin recruitment to chromosomes
-
Johzuka, K., and T. Horiuchi. 2009. The cis element and factors required for condensin recruitment to chromosomes. Mol. Cell. 34:26-35. http://dx.doi.org/10.1016/j.molcel.2009.02.021
-
(2009)
Mol. Cell
, vol.34
, pp. 26-35
-
-
Johzuka, K.1
Horiuchi, T.2
-
43
-
-
0037135134
-
Systematic identification of pathways that couple cell growth and division in yeast
-
Jorgensen, P., J.L. Nishikawa, B.J. Breitkreutz, and M. Tyers. 2002. Systematic identification of pathways that couple cell growth and division in yeast. Science. 297:395-400. http://dx.doi.org/10.1126/science.1070850
-
(2002)
Science
, vol.297
, pp. 395-400
-
-
Jorgensen, P.1
Nishikawa, J.L.2
Breitkreutz, B.J.3
Tyers, M.4
-
44
-
-
33846811598
-
High-density yeasttiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing
-
Juneau, K., C. Palm, M. Miranda, and R.W. Davis. 2007. High-density yeasttiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing. Proc. Natl. Acad. Sci. USA. 104:1522-1527. http://dx.doi.org/10.1073/pnas.0610354104
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 1522-1527
-
-
Juneau, K.1
Palm, C.2
Miranda, M.3
Davis, R.W.4
-
45
-
-
33749346301
-
Modification of proteins by ubiquitin and ubiquitin-like proteins
-
Kerscher, O., R. Felberbaum, and M. Hochstrasser. 2006. Modification of proteins by ubiquitin and ubiquitin-like proteins. Annu. Rev. Cell Dev. Biol. 22: 159-180. http://dx.doi.org/10.1146/annurev.cellbio.22.010605.093503
-
(2006)
Annu. Rev. Cell Dev. Biol
, vol.22
, pp. 159-180
-
-
Kerscher, O.1
Felberbaum, R.2
Hochstrasser, M.3
-
46
-
-
84856069665
-
A SUMOylationdependent transcriptional subprogram is required for Myc-driven tumorigenesis
-
Kessler, J.D., K.T. Kahle, T. Sun, K.L. Meerbrey, M.R. Schlabach, E.M. Schmitt, S.O. Skinner, Q. Xu, M.Z. Li, Z.C. Hartman, et al. 2012. A SUMOylationdependent transcriptional subprogram is required for Myc-driven tumorigenesis. Science. 335:348-353. http://dx.doi.org/10.1126/science.1212728
-
(2012)
Science
, vol.335
, pp. 348-353
-
-
Kessler, J.D.1
Kahle, K.T.2
Sun, T.3
Meerbrey, K.L.4
Schlabach, M.R.5
Schmitt, E.M.6
Skinner, S.O.7
Xu, Q.8
Li, M.Z.9
Hartman, Z.C.10
-
47
-
-
33750486509
-
A SUMOry of DNA replication: synthesis, damage, and repair
-
Klein, H.L. 2006. A SUMOry of DNA replication: synthesis, damage, and repair. Cell. 127:455-457. http://dx.doi.org/10.1016/j.cell.2006.10.019
-
(2006)
Cell
, vol.127
, pp. 455-457
-
-
Klein, H.L.1
-
48
-
-
75549091259
-
DRYGIN: a database of quantitative genetic interaction networks in yeast
-
Koh, J.L., H. Ding, M. Costanzo, A. Baryshnikova, K. Toufighi, G.D. Bader, C.L. Myers, B.J. Andrews, and C. Boone. 2010. DRYGIN: a database of quantitative genetic interaction networks in yeast. Nucleic Acids Res. 38(Database issue):D502-D507. http://dx.doi.org/10.1093/nar/gkp820
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.DATABASE ISSUE
-
-
Koh, J.L.1
Ding, H.2
Costanzo, M.3
Baryshnikova, A.4
Toufighi, K.5
Bader, G.D.6
Myers, C.L.7
Andrews, B.J.8
Boone, C.9
-
49
-
-
43049096803
-
Arsenic degrades PML or PML-RARalpha through a SUMO-triggered RNF4/ubiquitinmediated pathway
-
Lallemand-Breitenbach, V., M. Jeanne, S. Benhenda, R. Nasr, M. Lei, L. Peres, J. Zhou, J. Zhu, B. Raught, and H. de Thé. 2008. Arsenic degrades PML or PML-RARalpha through a SUMO-triggered RNF4/ubiquitinmediated pathway. Nat. Cell Biol. 10:547-555. http://dx.doi.org/10.1038/ncb1717
-
(2008)
Nat. Cell Biol
, vol.10
, pp. 547-555
-
-
Lallemand-Breitenbach, V.1
Jeanne, M.2
Benhenda, S.3
Nasr, R.4
Lei, M.5
Peres, L.6
Zhou, J.7
Zhu, J.8
Raught, B.9
de Thé, H.10
-
50
-
-
79953753596
-
The SUMO isopeptidase Ulp2p is required to prevent recombination-induced chromosome segregation lethality following DNA replication stress
-
Lee, M.T., A.A. Bakir, K.N. Nguyen, and J. Bachant. 2011. The SUMO isopeptidase Ulp2p is required to prevent recombination-induced chromosome segregation lethality following DNA replication stress. PLoS Genet. 7:e1001355. http://dx.doi.org/10.1371/journal.pgen.1001355
-
(2011)
PLoS Genet
, vol.7
-
-
Lee, M.T.1
Bakir, A.A.2
Nguyen, K.N.3
Bachant, J.4
-
51
-
-
33750935287
-
Gaps and forks in DNA replication: Rediscovering old models
-
Lehmann, A.R., and R.P. Fuchs. 2006. Gaps and forks in DNA replication: Rediscovering old models. DNA Repair (Amst.). 5:1495-1498. http://dx.doi.org/10.1016/j.dnarep.2006.07.002
-
(2006)
DNA Repair (Amst.)
, vol.5
, pp. 1495-1498
-
-
Lehmann, A.R.1
Fuchs, R.P.2
-
52
-
-
0033580444
-
A new protease required for cell-cycle progression in yeast
-
Li, S.J., and M. Hochstrasser. 1999. A new protease required for cell-cycle progression in yeast. Nature. 398:246-251. http://dx.doi.org/10.1038/18457
-
(1999)
Nature
, vol.398
, pp. 246-251
-
-
Li, S.J.1
Hochstrasser, M.2
-
53
-
-
77953810027
-
Role of SUMO: SIM-mediated protein-protein interaction in non-homologous end joining
-
Li, Y.J., J.M. Stark, D.J. Chen, D.K. Ann, and Y. Chen. 2010. Role of SUMO: SIM-mediated protein-protein interaction in non-homologous end joining. Oncogene. 29:3509-3518. http://dx.doi.org/10.1038/onc.2010.108
-
(2010)
Oncogene
, vol.29
, pp. 3509-3518
-
-
Li, Y.J.1
Stark, J.M.2
Chen, D.J.3
Ann, D.K.4
Chen, Y.5
-
54
-
-
19944432787
-
Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase
-
Liberi, G., G. Maffioletti, C. Lucca, I. Chiolo, A. Baryshnikova, C. Cotta-Ramusino, M. Lopes, A. Pellicioli, J.E. Haber, and M. Foiani. 2005. Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase. Genes Dev. 19:339-350. http://dx.doi.org/10.1101/gad.322605
-
(2005)
Genes Dev
, vol.19
, pp. 339-350
-
-
Liberi, G.1
Maffioletti, G.2
Lucca, C.3
Chiolo, I.4
Baryshnikova, A.5
Cotta-Ramusino, C.6
Lopes, M.7
Pellicioli, A.8
Haber, J.E.9
Foiani, M.10
-
55
-
-
33644870210
-
The yeast histone chaperone chromatin assembly factor 1 protects against double-strand DNA-damaging agents
-
Linger, J., and J.K. Tyler. 2005. The yeast histone chaperone chromatin assembly factor 1 protects against double-strand DNA-damaging agents. Genetics. 171:1513-1522. http://dx.doi.org/10.1534/genetics.105.043000
-
(2005)
Genetics
, vol.171
, pp. 1513-1522
-
-
Linger, J.1
Tyler, J.K.2
-
56
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
-
Livak, K.J., and T.D. Schmittgen. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods. 25:402-408. http://dx.doi.org/10.1006/meth.2001.1262
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
57
-
-
59249092289
-
The CTCF insulator protein is posttranslationally modified by SUMO
-
MacPherson, M.J., L.G. Beatty, W. Zhou, M. Du, and P.D. Sadowski. 2009. The CTCF insulator protein is posttranslationally modified by SUMO. Mol. Cell. Biol. 29:714-725. http://dx.doi.org/10.1128/MCB.00825-08
-
(2009)
Mol. Cell. Biol
, vol.29
, pp. 714-725
-
-
MacPherson, M.J.1
Beatty, L.G.2
Zhou, W.3
Du, M.4
Sadowski, P.D.5
-
58
-
-
34247103108
-
The role of karyopherins in the regulated sumoylation of septins
-
Makhnevych, T., C. Ptak, C.P. Lusk, J.D. Aitchison, and R.W. Wozniak. 2007. The role of karyopherins in the regulated sumoylation of septins. J. Cell Biol. 177:39-49. http://dx.doi.org/10.1083/jcb.200608066
-
(2007)
J. Cell Biol
, vol.177
, pp. 39-49
-
-
Makhnevych, T.1
Ptak, C.2
Lusk, C.P.3
Aitchison, J.D.4
Wozniak, R.W.5
-
59
-
-
58149305555
-
Global map of SUMO function revealed by protein-protein interaction and genetic networks
-
Makhnevych, T., Y. Sydorskyy, X. Xin, T. Srikumar, F.J. Vizeacoumar, S.M. Jeram, Z. Li, S. Bahr, B.J. Andrews, C. Boone, and B. Raught. 2009. Global map of SUMO function revealed by protein-protein interaction and genetic networks. Mol. Cell. 33:124-135. http://dx.doi.org/10.1016/j.molcel.2008.12.025
-
(2009)
Mol. Cell
, vol.33
, pp. 124-135
-
-
Makhnevych, T.1
Sydorskyy, Y.2
Xin, X.3
Srikumar, T.4
Vizeacoumar, F.J.5
Jeram, S.M.6
Li, Z.7
Bahr, S.8
Andrews, B.J.9
Boone, C.10
Raught, B.11
-
60
-
-
55249095331
-
Phosphorylation of SUMO-1 occurs in vivo and is conserved through evolution
-
Matic, I., B. Macek, M. Hilger, T.C. Walther, and M. Mann. 2008. Phosphorylation of SUMO-1 occurs in vivo and is conserved through evolution. J. Proteome Res. 7:4050-4057. http://dx.doi.org/10.1021/pr800368m
-
(2008)
J. Proteome Res
, vol.7
, pp. 4050-4057
-
-
Matic, I.1
Macek, B.2
Hilger, M.3
Walther, T.C.4
Mann, M.5
-
61
-
-
84889079202
-
Global SUMO proteome responses guide gene regulation, mRNA biogenesis, and plant stress responses
-
Mazur, M.J., and H.A. van den Burg. 2012. Global SUMO proteome responses guide gene regulation, mRNA biogenesis, and plant stress responses. Front Plant Sci. 3:215. http://dx.doi.org/10.3389/fpls.2012.00215
-
(2012)
Front Plant Sci
, vol.3
, pp. 215
-
-
Mazur, M.J.1
van den Burg, H.A.2
-
62
-
-
57349093701
-
Role for perinuclear chromosome tethering in maintenance of genome stability
-
Mekhail, K., J. Seebacher, S.P. Gygi, and D. Moazed. 2008. Role for perinuclear chromosome tethering in maintenance of genome stability. Nature. 456:667-670. http://dx.doi.org/10.1038/nature07460
-
(2008)
Nature
, vol.456
, pp. 667-670
-
-
Mekhail, K.1
Seebacher, J.2
Gygi, S.P.3
Moazed, D.4
-
63
-
-
0029044625
-
Evidence that the MIF2 gene of Saccharomyces cerevisiae encodes a centromere protein with homology to the mammalian centromere protein CENP-C
-
Meluh, P.B., and D. Koshland. 1995. Evidence that the MIF2 gene of Saccharomyces cerevisiae encodes a centromere protein with homology to the mammalian centromere protein CENP-C. Mol. Biol. Cell. 6:793-807.
-
(1995)
Mol. Biol. Cell
, vol.6
, pp. 793-807
-
-
Meluh, P.B.1
Koshland, D.2
-
64
-
-
33645879818
-
Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications
-
Nathan, D., K. Ingvarsdottir, D.E. Sterner, G.R. Bylebyl, M. Dokmanovic, J.A. Dorsey, K.A. Whelan, M. Krsmanovic, W.S. Lane, P.B. Meluh, et al. 2006. Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications. Genes Dev. 20:966-976. http://dx.doi.org/10.1101/gad.1404206
-
(2006)
Genes Dev
, vol.20
, pp. 966-976
-
-
Nathan, D.1
Ingvarsdottir, K.2
Sterner, D.E.3
Bylebyl, G.R.4
Dokmanovic, M.5
Dorsey, J.A.6
Whelan, K.A.7
Krsmanovic, M.8
Lane, W.S.9
Meluh, P.B.10
-
65
-
-
67650115041
-
Genetic and proteomic evidence for roles of Drosophila SUMO in cell cycle control, Ras signaling, and early pattern formation
-
Nie, M., Y. Xie, J.A. Loo, and A.J. Courey. 2009. Genetic and proteomic evidence for roles of Drosophila SUMO in cell cycle control, Ras signaling, and early pattern formation. PLoS ONE. 4:e5905. http://dx.doi.org/10.1371/journal.pone.0005905
-
(2009)
PLoS ONE
, vol.4
-
-
Nie, M.1
Xie, Y.2
Loo, J.A.3
Courey, A.J.4
-
66
-
-
84865475874
-
Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions
-
Nie, M., A. Aslanian, J. Prudden, J. Heideker, A.A. Vashisht, J.A. Wohlschlegel, J.R. Yates III, and M.N. Boddy. 2012. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. J. Biol. Chem. 287:29610-29619. http://dx.doi.org/10.1074/jbc.M112.379768
-
(2012)
J. Biol. Chem
, vol.287
, pp. 29610-29619
-
-
Nie, M.1
Aslanian, A.2
Prudden, J.3
Heideker, J.4
Vashisht, A.A.5
Wohlschlegel, J.A.6
Yates III, J.R.7
Boddy, M.N.8
-
67
-
-
64749093273
-
Direct binding of CoREST1 to SUMO-2/3 contributes to gene-specific repression by the LSD1/CoREST1/HDAC complex
-
Ouyang, J., Y. Shi, A. Valin, Y. Xuan, and G. Gill. 2009. Direct binding of CoREST1 to SUMO-2/3 contributes to gene-specific repression by the LSD1/CoREST1/HDAC complex. Mol. Cell. 34:145-154. http://dx.doi.org/10.1016/j.molcel.2009.03.013
-
(2009)
Mol. Cell
, vol.34
, pp. 145-154
-
-
Ouyang, J.1
Shi, Y.2
Valin, A.3
Xuan, Y.4
Gill, G.5
-
68
-
-
0037225962
-
Unconventional tethering of Ulp1 to the transport channel of the nuclear pore complex by karyopherins
-
Panse, V.G., B. Küster, T. Gerstberger, and E. Hurt. 2003. Unconventional tethering of Ulp1 to the transport channel of the nuclear pore complex by karyopherins. Nat. Cell Biol. 5:21-27. http://dx.doi.org/10.1038/ncb893
-
(2003)
Nat. Cell Biol
, vol.5
, pp. 21-27
-
-
Panse, V.G.1
Küster, B.2
Gerstberger, T.3
Hurt, E.4
-
69
-
-
84891592893
-
A SUMOylation motif in Aurora-A: implications for spindle dynamics and oncogenesis
-
Pérez de Castro, I., C. Aguirre-Portolés, B. Martin, G. Fernández-Miranda, A. Klotzbucher, M.H. Kubbutat, D. Megías, Y. Arlot-Bonnemains, and M. Malumbres. 2011. A SUMOylation motif in Aurora-A: implications for spindle dynamics and oncogenesis. Front Oncol. 1:50.
-
(2011)
Front Oncol
, vol.1
, pp. 50
-
-
Pérez de Castro, I.1
Aguirre-Portolés, C.2
Martin, B.3
Fernández-Miranda, G.4
Klotzbucher, A.5
Kubbutat, M.H.6
Megías, D.7
Arlot-Bonnemains, Y.8
Malumbres, M.9
-
70
-
-
36148972085
-
Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D
-
Perocchi, F., Z. Xu, S. Clauder-Münster, and L.M. Steinmetz. 2007. Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D. Nucleic Acids Res. 35:e128. http://dx.doi.org/10.1093/nar/gkm683
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Perocchi, F.1
Xu, Z.2
Clauder-Münster, S.3
Steinmetz, L.M.4
-
71
-
-
43849093519
-
A SIM-ultaneous role for SUMO and ubiquitin
-
Perry, J.J., J.A. Tainer, and M.N. Boddy. 2008. A SIM-ultaneous role for SUMO and ubiquitin. Trends Biochem. Sci. 33:201-208. http://dx.doi.org/10.1016/j.tibs.2008.02.001
-
(2008)
Trends Biochem. Sci
, vol.33
, pp. 201-208
-
-
Perry, J.J.1
Tainer, J.A.2
Boddy, M.N.3
-
72
-
-
34648840192
-
SUMO-targeted ubiquitin ligases in genome stability
-
Prudden, J., S. Pebernard, G. Raffa, D.A. Slavin, J.J. Perry, J.A. Tainer, C.H. McGowan, and M.N. Boddy. 2007. SUMO-targeted ubiquitin ligases in genome stability. EMBO J. 26:4089-4101. http://dx.doi.org/10.1038/sj.emboj.7601838
-
(2007)
EMBO J
, vol.26
, pp. 4089-4101
-
-
Prudden, J.1
Pebernard, S.2
Raffa, G.3
Slavin, D.A.4
Perry, J.J.5
Tainer, J.A.6
McGowan, C.H.7
Boddy, M.N.8
-
73
-
-
30044436319
-
The thioredoxin system protects ribosomes against stress-induced aggregation
-
Rand, J.D., and C.M. Grant. 2006. The thioredoxin system protects ribosomes against stress-induced aggregation. Mol. Biol. Cell. 17:387-401. http://dx.doi.org/10.1091/mbc.E05-06-0520
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 387-401
-
-
Rand, J.D.1
Grant, C.M.2
-
74
-
-
77953929082
-
SUMO functions in constitutive transcription and during activation of inducible genes in yeast
-
Rosonina, E., S.M. Duncan, and J.L. Manley. 2010. SUMO functions in constitutive transcription and during activation of inducible genes in yeast. Genes Dev. 24:1242-1252. http://dx.doi.org/10.1101/gad.1917910
-
(2010)
Genes Dev
, vol.24
, pp. 1242-1252
-
-
Rosonina, E.1
Duncan, S.M.2
Manley, J.L.3
-
75
-
-
0036809115
-
SUMO-1 modification represses Sp3 transcriptional activation and modulates its subnuclear localization
-
Ross, S., J.L. Best, L.I. Zon, and G. Gill. 2002. SUMO-1 modification represses Sp3 transcriptional activation and modulates its subnuclear localization. Mol. Cell. 10:831-842. http://dx.doi.org/10.1016/S1097-2765(02)00682-2
-
(2002)
Mol. Cell
, vol.10
, pp. 831-842
-
-
Ross, S.1
Best, J.L.2
Zon, L.I.3
Gill, G.4
-
76
-
-
76749168005
-
Roles of Werner syndrome protein in protection of genome integrity
-
Rossi, M.L., A.K. Ghosh, and V.A. Bohr. 2010. Roles of Werner syndrome protein in protection of genome integrity. DNA Repair (Amst.). 9:331-344. http://dx.doi.org/10.1016/j.dnarep.2009.12.011
-
(2010)
DNA Repair (Amst.)
, vol.9
, pp. 331-344
-
-
Rossi, M.L.1
Ghosh, A.K.2
Bohr, V.A.3
-
77
-
-
59449088040
-
Voa1p functions in V-ATPase assembly in the yeast endoplasmic reticulum
-
Ryan, M., L.A. Graham, and T.H. Stevens. 2008. Voa1p functions in V-ATPase assembly in the yeast endoplasmic reticulum. Mol. Biol. Cell. 19:5131-5142. http://dx.doi.org/10.1091/mbc.E08-06-0629
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 5131-5142
-
-
Ryan, M.1
Graham, L.A.2
Stevens, T.H.3
-
78
-
-
78651390345
-
A functional SUMO-interacting motif in the transactivation domain of c-Myb regulates its myeloid transforming ability
-
Saether, T., D.R. Pattabiraman, A.H. Alm-Kristiansen, L.T. Vogt-Kielland, T.J. Gonda, and O.S. Gabrielsen. 2011. A functional SUMO-interacting motif in the transactivation domain of c-Myb regulates its myeloid transforming ability. Oncogene. 30:212-222. http://dx.doi.org/10.1038/onc.2010.397
-
(2011)
Oncogene
, vol.30
, pp. 212-222
-
-
Saether, T.1
Pattabiraman, D.R.2
Alm-Kristiansen, A.H.3
Vogt-Kielland, L.T.4
Gonda, T.J.5
Gabrielsen, O.S.6
-
79
-
-
60749120563
-
Identification of two independent SUMO-interacting motifs in Daxx: evolutionary conservation from Drosophila to humans and their biochemical functions
-
Santiago, A., A.C. Godsey, J. Hossain, L.Y. Zhao, and D. Liao. 2009. Identification of two independent SUMO-interacting motifs in Daxx: evolutionary conservation from Drosophila to humans and their biochemical functions. Cell Cycle. 8:76-87. http://dx.doi.org/10.4161/cc.8.1.7493
-
(2009)
Cell Cycle
, vol.8
, pp. 76-87
-
-
Santiago, A.1
Godsey, A.C.2
Hossain, J.3
Zhao, L.Y.4
Liao, D.5
-
80
-
-
34748837775
-
The Ulp2 SUMO protease is required for cell division following termination of the DNA damage checkpoint
-
Schwartz, D.C., R. Felberbaum, and M. Hochstrasser. 2007. The Ulp2 SUMO protease is required for cell division following termination of the DNA damage checkpoint. Mol. Cell. Biol. 27:6948-6961. http://dx.doi.org/10.1128/MCB.00774-07
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 6948-6961
-
-
Schwartz, D.C.1
Felberbaum, R.2
Hochstrasser, M.3
-
81
-
-
0028967267
-
Role of a ubiquitin-conjugating enzyme in degradation of S- and M-phase cyclins
-
Seufert, W., B. Futcher, and S. Jentsch. 1995. Role of a ubiquitin-conjugating enzyme in degradation of S- and M-phase cyclins. Nature. 373:78-81. http://dx.doi.org/10.1038/373078a0
-
(1995)
Nature
, vol.373
, pp. 78-81
-
-
Seufert, W.1
Futcher, B.2
Jentsch, S.3
-
82
-
-
0344824404
-
Histone sumoylation is associated with transcriptional repression
-
Shiio, Y., and R.N. Eisenman. 2003. Histone sumoylation is associated with transcriptional repression. Proc. Natl. Acad. Sci. USA. 100:13225-13230. http://dx.doi.org/10.1073/pnas.1735528100
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 13225-13230
-
-
Shiio, Y.1
Eisenman, R.N.2
-
83
-
-
84862798314
-
DeSUMOylating isopeptidase: a second class of SUMO protease
-
Shin, E.J., H.M. Shin, E. Nam, W.S. Kim, J.H. Kim, B.H. Oh, and Y. Yun. 2012. DeSUMOylating isopeptidase: a second class of SUMO protease. EMBO Rep. 13:339-346. http://dx.doi.org/10.1038/embor.2012.3
-
(2012)
EMBO Rep
, vol.13
, pp. 339-346
-
-
Shin, E.J.1
Shin, H.M.2
Nam, E.3
Kim, W.S.4
Kim, J.H.5
Oh, B.H.6
Yun, Y.7
-
84
-
-
40849150778
-
Identification of SUMO-dependent chromatin-associated transcriptional repression components by a genome-wide RNAi screen
-
Stielow, B., A. Sapetschnig, I. Krüger, N. Kunert, A. Brehm, M. Boutros, and G. Suske. 2008a. Identification of SUMO-dependent chromatin-associated transcriptional repression components by a genome-wide RNAi screen. Mol. Cell. 29:742-754. http://dx.doi.org/10.1016/j.molcel.2007.12.032
-
(2008)
Mol. Cell
, vol.29
, pp. 742-754
-
-
Stielow, B.1
Sapetschnig, A.2
Krüger, I.3
Kunert, N.4
Brehm, A.5
Boutros, M.6
Suske, G.7
-
85
-
-
51049083598
-
SUMOmodified Sp3 represses transcription by provoking local heterochromatic gene silencing
-
Stielow, B., A. Sapetschnig, C. Wink, I. Krüger, and G. Suske. 2008b. SUMOmodified Sp3 represses transcription by provoking local heterochromatic gene silencing. EMBO Rep. 9:899-906. http://dx.doi.org/10.1038/embor.2008.127
-
(2008)
EMBO Rep
, vol.9
, pp. 899-906
-
-
Stielow, B.1
Sapetschnig, A.2
Wink, C.3
Krüger, I.4
Suske, G.5
-
86
-
-
78649710597
-
Epigenetic silencing of spermatocytespecific and neuronal genes by SUMO modification of the transcription factor Sp3
-
Stielow, B., I. Krüger, R. Diezko, F. Finkernagel, N. Gillemans, J. Kong-a-San, S. Philipsen, and G. Suske. 2010. Epigenetic silencing of spermatocytespecific and neuronal genes by SUMO modification of the transcription factor Sp3. PLoS Genet. 6:e1001203. http://dx.doi.org/10.1371/journal.pgen.1001203
-
(2010)
PLoS Genet
, vol.6
-
-
Stielow, B.1
Krüger, I.2
Diezko, R.3
Finkernagel, F.4
Gillemans, N.5
Kong-a-San, J.6
Philipsen, S.7
Suske, G.8
-
87
-
-
34648816891
-
Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins
-
Sun, H., J.D. Leverson, and T. Hunter. 2007. Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins. EMBO J. 26:4102-4112. http://dx.doi.org/10.1038/sj.emboj.7601839
-
(2007)
EMBO J
, vol.26
, pp. 4102-4112
-
-
Sun, H.1
Leverson, J.D.2
Hunter, T.3
-
88
-
-
0033574967
-
Smt3, a SUMO-1 homolog, is conjugated to Cdc3, a component of septin rings at the mother-bud neck in budding yeast
-
Takahashi, Y., M. Iwase, M. Konishi, M. Tanaka, A. Toh-e, and Y. Kikuchi. 1999. Smt3, a SUMO-1 homolog, is conjugated to Cdc3, a component of septin rings at the mother-bud neck in budding yeast. Biochem. Biophys. Res. Commun. 259:582-587. http://dx.doi.org/10.1006/bbrc.1999.0821
-
(1999)
Biochem. Biophys. Res. Commun
, vol.259
, pp. 582-587
-
-
Takahashi, Y.1
Iwase, M.2
Konishi, M.3
Tanaka, M.4
Toh-e, A.5
Kikuchi, Y.6
-
89
-
-
55449106609
-
Cooperation of sumoylated chromosomal proteins in rDNA maintenance
-
Takahashi, Y., S. Dulev, X. Liu, N.J. Hiller, X. Zhao, and A. Strunnikov. 2008. Cooperation of sumoylated chromosomal proteins in rDNA maintenance. PLoS Genet. 4:e1000215. http://dx.doi.org/10.1371/journal.pgen.1000215
-
(2008)
PLoS Genet
, vol.4
-
-
Takahashi, Y.1
Dulev, S.2
Liu, X.3
Hiller, N.J.4
Zhao, X.5
Strunnikov, A.6
-
90
-
-
73449116050
-
Loss of yeast peroxiredoxin Tsa1p induces genome instability through activation of the DNA damage checkpoint and elevation of dNTP levels
-
Tang, H.M., K.L. Siu, C.M. Wong, and D.Y. Jin. 2009. Loss of yeast peroxiredoxin Tsa1p induces genome instability through activation of the DNA damage checkpoint and elevation of dNTP levels. PLoS Genet. 5:e1000697. http://dx.doi.org/10.1371/journal.pgen.1000697
-
(2009)
PLoS Genet
, vol.5
-
-
Tang, H.M.1
Siu, K.L.2
Wong, C.M.3
Jin, D.Y.4
-
91
-
-
43049093756
-
RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation
-
Tatham, M.H., M.C. Geoffroy, L. Shen, A. Plechanovova, N. Hattersley, E.G. Jaffray, J.J. Palvimo, and R.T. Hay. 2008. RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation. Nat. Cell Biol. 10:538-546. http://dx.doi.org/10.1038/ncb1716
-
(2008)
Nat. Cell Biol
, vol.10
, pp. 538-546
-
-
Tatham, M.H.1
Geoffroy, M.C.2
Shen, L.3
Plechanovova, A.4
Hattersley, N.5
Jaffray, E.G.6
Palvimo, J.J.7
Hay, R.T.8
-
93
-
-
84865715286
-
Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress
-
Tkach, J.M., A. Yimit, A.Y. Lee, M. Riffle, M. Costanzo, D. Jaschob, J.A. Hendry, J. Ou, J. Moffat, C. Boone, et al. 2012. Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat. Cell Biol. 14:966-976. http://dx.doi.org/10.1038/ncb2549
-
(2012)
Nat. Cell Biol
, vol.14
, pp. 966-976
-
-
Tkach, J.M.1
Yimit, A.2
Lee, A.Y.3
Riffle, M.4
Costanzo, M.5
Jaschob, D.6
Hendry, J.A.7
Ou, J.8
Moffat, J.9
Boone, C.10
-
94
-
-
34247575803
-
High-throughput strain construction and systematic synthetic lethal screening in Saccharomyces cerevisiae
-
In Yeast Gene Analysis, Second Edition.
-
Tong, A.H.Y., and C. Boone. 2007. High-throughput strain construction and systematic synthetic lethal screening in Saccharomyces cerevisiae. In Yeast Gene Analysis, Second Edition. 36:369-707.
-
(2007)
, vol.36
, pp. 369-707
-
-
Tong, A.H.Y.1
Boone, C.2
-
95
-
-
16344379951
-
SMC5 and SMC6 genes are required for the segregation of repetitive chromosome regions
-
Torres-Rosell, J., F. Machín, S. Farmer, A. Jarmuz, T. Eydmann, J.Z. Dalgaard, and L. Aragón. 2005. SMC5 and SMC6 genes are required for the segregation of repetitive chromosome regions. Nat. Cell Biol. 7:412-419. http://dx.doi.org/10.1038/ncb1239
-
(2005)
Nat. Cell Biol
, vol.7
, pp. 412-419
-
-
Torres-Rosell, J.1
Machín, F.2
Farmer, S.3
Jarmuz, A.4
Eydmann, T.5
Dalgaard, J.Z.6
Aragón, L.7
-
96
-
-
84855905945
-
Genomic approaches for determining nucleosome occupancy in yeast
-
Tsui, K., T. Durbic, M. Gebbia, and C. Nislow. 2012. Genomic approaches for determining nucleosome occupancy in yeast. Methods Mol. Biol. 833:389-411. http://dx.doi.org/10.1007/978-1-61779-477-3_23
-
(2012)
Methods Mol. Biol
, vol.833
, pp. 389-411
-
-
Tsui, K.1
Durbic, T.2
Gebbia, M.3
Nislow, C.4
-
97
-
-
33747373841
-
Involvement of SUMO modification in MBD1- and MCAF1-mediated heterochromatin formation
-
Uchimura, Y., T. Ichimura, J. Uwada, T. Tachibana, S. Sugahara, M. Nakao, and H. Saitoh. 2006. Involvement of SUMO modification in MBD1- and MCAF1-mediated heterochromatin formation. J. Biol. Chem. 281:23180-23190. http://dx.doi.org/10.1074/jbc.M602280200
-
(2006)
J. Biol. Chem
, vol.281
, pp. 23180-23190
-
-
Uchimura, Y.1
Ichimura, T.2
Uwada, J.3
Tachibana, T.4
Sugahara, S.5
Nakao, M.6
Saitoh, H.7
-
98
-
-
84863003858
-
An acetylation switch regulates SUMO-dependent protein interaction networks
-
Ullmann, R., C.D. Chien, M.L. Avantaggiati, and S. Muller. 2012. An acetylation switch regulates SUMO-dependent protein interaction networks. Mol. Cell. 46:759-770. http://dx.doi.org/10.1016/j.molcel.2012.04.006
-
(2012)
Mol. Cell
, vol.46
, pp. 759-770
-
-
Ullmann, R.1
Chien, C.D.2
Avantaggiati, M.L.3
Muller, S.4
-
99
-
-
34547591343
-
Primer3Plus, an enhanced web interface to Primer3
-
Untergasser, A., H. Nijveen, X. Rao, T. Bisseling, R. Geurts, and J.A. Leunissen. 2007. Primer3Plus, an enhanced web interface to Primer3. Nucleic Acids Res. 35(Web Server issue):W71-W74. http://dx.doi.org/10.1093/nar/gkm306
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.WEB SERVER ISSUE
-
-
Untergasser, A.1
Nijveen, H.2
Rao, X.3
Bisseling, T.4
Geurts, R.5
Leunissen, J.A.6
-
100
-
-
33846794442
-
In vivo analysis of chromosome condensation in Saccharomyces cerevisiae
-
Vas, A.C., C.A. Andrews, K. Kirkland Matesky, and D.J. Clarke. 2007. In vivo analysis of chromosome condensation in Saccharomyces cerevisiae. Mol. Biol. Cell. 18:557-568. http://dx.doi.org/10.1091/mbc.E06-05-0454
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 557-568
-
-
Vas, A.C.1
Andrews, C.A.2
Kirkland Matesky, K.3
Clarke, D.J.4
-
101
-
-
75749095658
-
Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis
-
Vizeacoumar, F.J., N. van Dyk, F. S Vizeacoumar, V. Cheung, J. Li, Y. Sydorskyy, N. Case, Z. Li, A. Datti, C. Nislow, et al. 2010. Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis. J. Cell Biol. 188:69-81. http://dx.doi.org/10.1083/jcb.200909013
-
(2010)
J. Cell Biol
, vol.188
, pp. 69-81
-
-
Vizeacoumar, F.J.1
van Dyk, N.2
Vizeacoumar, F.S.3
Cheung, V.4
Li, J.5
Sydorskyy, Y.6
Case, N.7
Li, Z.8
Datti, A.9
Nislow, C.10
-
102
-
-
84866543814
-
SUMOylation in control of accurate chromosome segregation during mitosis
-
Wan, J., D. Subramonian, and X.D. Zhang. 2012. SUMOylation in control of accurate chromosome segregation during mitosis. Curr. Protein Pept. Sci. 13:467-481. http://dx.doi.org/10.2174/138920312802430563
-
(2012)
Curr. Protein Pept. Sci
, vol.13
, pp. 467-481
-
-
Wan, J.1
Subramonian, D.2
Zhang, X.D.3
-
103
-
-
63049110916
-
Quality control of a transcriptional regulator by SUMO-targeted degradation
-
Wang, Z., and G. Prelich. 2009. Quality control of a transcriptional regulator by SUMO-targeted degradation. Mol. Cell. Biol. 29:1694-1706. http://dx.doi.org/10.1128/MCB.01470-08
-
(2009)
Mol. Cell. Biol
, vol.29
, pp. 1694-1706
-
-
Wang, Z.1
Prelich, G.2
-
104
-
-
33645222457
-
Genetic analysis connects SLX5 and SLX8 to the SUMO pathway in Saccharomyces cerevisiae
-
Wang, Z., G.M. Jones, and G. Prelich. 2006. Genetic analysis connects SLX5 and SLX8 to the SUMO pathway in Saccharomyces cerevisiae. Genetics. 172:1499-1509. http://dx.doi.org/10.1534/genetics.105.052811
-
(2006)
Genetics
, vol.172
, pp. 1499-1509
-
-
Wang, Z.1
Jones, G.M.2
Prelich, G.3
-
105
-
-
0033672549
-
Mitochondria-targeted green fluorescent proteins: convenient tools for the study of organelle biogenesis in Saccharomyces cerevisiae
-
Westermann, B., and W. Neupert. 2000. Mitochondria-targeted green fluorescent proteins: convenient tools for the study of organelle biogenesis in Saccharomyces cerevisiae. Yeast. 16:1421-1427. http://dx.doi.org/10.1002/1097-0061(200011)16:15<1421::AID-YEA624>3.0.CO;2-U
-
(2000)
Yeast
, vol.16
, pp. 1421-1427
-
-
Westermann, B.1
Neupert, W.2
-
106
-
-
8544273758
-
Global analysis of protein sumoylation in Saccharomyces cerevisiae
-
Wohlschlegel, J.A., E.S. Johnson, S.I. Reed, and J.R. Yates III. 2004. Global analysis of protein sumoylation in Saccharomyces cerevisiae. J. Biol. Chem. 279:45662-45668. http://dx.doi.org/10.1074/jbc.M409203200
-
(2004)
J. Biol. Chem
, vol.279
, pp. 45662-45668
-
-
Wohlschlegel, J.A.1
Johnson, E.S.2
Reed, S.I.3
Yates III, J.R.4
-
107
-
-
0034671421
-
Transmission electron microscopy of yeast
-
Wright, R. 2000. Transmission electron microscopy of yeast. Microsc. Res. Tech. 51:496-510. http://dx.doi.org/10.1002/1097-0029(20001215)51:6<496::AID-JEMT2>3.0.CO;2-9
-
(2000)
Microsc. Res. Tech
, vol.51
, pp. 496-510
-
-
Wright, R.1
-
108
-
-
33751426143
-
DNA helicases required for homologous recombination and repair of damaged replication forks
-
Wu, L., and I.D. Hickson. 2006. DNA helicases required for homologous recombination and repair of damaged replication forks. Annu. Rev. Genet. 40:279-306. http://dx.doi.org/10.1146/annurev.genet.40.110405.090636
-
(2006)
Annu. Rev. Genet
, vol.40
, pp. 279-306
-
-
Wu, L.1
Hickson, I.D.2
-
109
-
-
64149115354
-
Deficient SUMO attachment to Flp recombinase leads to homologous recombination-dependent hyperamplification of the yeast 2 microm circle plasmid
-
Xiong, L., X.L. Chen, H.R. Silver, N.T. Ahmed, and E.S. Johnson. 2009. Deficient SUMO attachment to Flp recombinase leads to homologous recombination-dependent hyperamplification of the yeast 2 microm circle plasmid. Mol. Biol. Cell. 20:1241-1251. http://dx.doi.org/10.1091/mbc.E08-06-0659
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 1241-1251
-
-
Xiong, L.1
Chen, X.L.2
Silver, H.R.3
Ahmed, N.T.4
Johnson, E.S.5
-
110
-
-
48449096999
-
Yeast Barcoders: a chemogenomic application of a universal donor-strain collection carrying bar-code identifiers
-
Yan, Z., M. Costanzo, L.E. Heisler, J. Paw, F. Kaper, B.J. Andrews, C. Boone, G. Giaever, and C. Nislow. 2008. Yeast Barcoders: a chemogenomic application of a universal donor-strain collection carrying bar-code identifiers. Nat. Methods. 5:719-725. http://dx.doi.org/10.1038/nmeth.1231
-
(2008)
Nat. Methods
, vol.5
, pp. 719-725
-
-
Yan, Z.1
Costanzo, M.2
Heisler, L.E.3
Paw, J.4
Kaper, F.5
Andrews, B.J.6
Boone, C.7
Giaever, G.8
Nislow, C.9
-
111
-
-
1542285164
-
SUMO promotes HDAC-mediated transcriptional repression
-
Yang, S.H., and A.D. Sharrocks. 2004. SUMO promotes HDAC-mediated transcriptional repression. Mol. Cell. 13:611-617. http://dx.doi.org/10.1016/S1097-2765(04)00060-7
-
(2004)
Mol. Cell
, vol.13
, pp. 611-617
-
-
Yang, S.H.1
Sharrocks, A.D.2
-
112
-
-
84861784690
-
SUMO-targeted ubiquitin E3 ligase RNF4 is required for the response of human cells to DNA damage
-
Yin, Y., A. Seifert, J.S. Chua, J.F. Maure, F. Golebiowski, and R.T. Hay. 2012. SUMO-targeted ubiquitin E3 ligase RNF4 is required for the response of human cells to DNA damage. Genes Dev. 26:1196-1208. http://dx.doi.org/10.1101/gad.189274.112
-
(2012)
Genes Dev
, vol.26
, pp. 1196-1208
-
-
Yin, Y.1
Seifert, A.2
Chua, J.S.3
Maure, J.F.4
Golebiowski, F.5
Hay, R.T.6
-
113
-
-
3543018486
-
Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stresses
-
Zhou, W., J.J. Ryan, and H. Zhou. 2004. Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stresses. J. Biol. Chem. 279:32262-32268. http://dx.doi.org/10.1074/jbc.M404173200
-
(2004)
J. Biol. Chem
, vol.279
, pp. 32262-32268
-
-
Zhou, W.1
Ryan, J.J.2
Zhou, H.3
|