-
1
-
-
0014935646
-
Natural selection and the concept of protein space
-
Maynard Smith J, (1970) Natural selection and the concept of protein space. Nature 225: 563-564.
-
(1970)
Nature
, vol.225
, pp. 563-564
-
-
Maynard Smith, J.1
-
2
-
-
0028196714
-
From Sequences to Shapes and Back: A Case Study in RNA Secondary Structures
-
Schuster P, Fontana W, Stadler PF, Hofacker IL, (1994) From Sequences to Shapes and Back: A Case Study in RNA Secondary Structures. Proc. Roy. Soc. Lond 255: 279-284.
-
(1994)
Proc. Roy. Soc. Lond
, vol.255
, pp. 279-284
-
-
Schuster, P.1
Fontana, W.2
Stadler, P.F.3
Hofacker, I.L.4
-
4
-
-
0033826584
-
Metastable Evolutionary Dynamics: Crossing Fitness Barriers or Escaping via Neutral Paths?
-
van Nimwegen E, Crutchfield JP, (2000) Metastable Evolutionary Dynamics: Crossing Fitness Barriers or Escaping via Neutral Paths? Bulletin of Mathematical Biology 62: 799-848.
-
(2000)
Bulletin of Mathematical Biology
, vol.62
, pp. 799-848
-
-
van Nimwegen, E.1
Crutchfield, J.P.2
-
5
-
-
54149088214
-
Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems
-
Phillips PC, (2008) Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems. Nat Rev Genet 9: 855-67.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 855-867
-
-
Phillips, P.C.1
-
6
-
-
0031827525
-
The language of gene interaction
-
Phillips PC, (1998) The language of gene interaction. Genetics 149: 1167-71.
-
(1998)
Genetics
, vol.149
, pp. 1167-1171
-
-
Phillips, P.C.1
-
8
-
-
34247881991
-
Analysis of epistatic interactions and fitness landscapes using a new geometric approach
-
Beerenwinkel N, Pachter L, Sturmfels B, Elena SF, Lenski RE, (2007) Analysis of epistatic interactions and fitness landscapes using a new geometric approach. BMC Evol Biol 7: 60.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 60
-
-
Beerenwinkel, N.1
Pachter, L.2
Sturmfels, B.3
Elena, S.F.4
Lenski, R.E.5
-
10
-
-
27144538817
-
The biochemical architecture of an ancient adaptive landscape
-
Lunzer M, Miller SP, Felsheim R, Dean AM, (2005) The biochemical architecture of an ancient adaptive landscape. Science 310: 499-501.
-
(2005)
Science
, vol.310
, pp. 499-501
-
-
Lunzer, M.1
Miller, S.P.2
Felsheim, R.3
Dean, A.M.4
-
11
-
-
33750287639
-
Direct demonstration of an adaptive constraint
-
Miller SP, Lunzer M, Dean AM, (2006) Direct demonstration of an adaptive constraint. Science 314: 458-61.
-
(2006)
Science
, vol.314
, pp. 458-461
-
-
Miller, S.P.1
Lunzer, M.2
Dean, A.M.3
-
12
-
-
33645691679
-
Evolution of hormone-receptor complexity by molecular exploitation
-
Bridgham JT, Carroll SM, Thornton JW, (2006) Evolution of hormone-receptor complexity by molecular exploitation. Science 312: 97-101.
-
(2006)
Science
, vol.312
, pp. 97-101
-
-
Bridgham, J.T.1
Carroll, S.M.2
Thornton, J.W.3
-
13
-
-
33645666942
-
Darwinian evolution can follow only very few mutational paths to fitter proteins
-
Weinreich DM, Delaney NF, Depristo MA, Hartl DL, (2006) Darwinian evolution can follow only very few mutational paths to fitter proteins. Science 312: 111-114.
-
(2006)
Science
, vol.312
, pp. 111-114
-
-
Weinreich, D.M.1
Delaney, N.F.2
Depristo, M.A.3
Hartl, D.L.4
-
14
-
-
34548040966
-
Crystal structure of an ancient protein: evolution by conformational epistasis
-
Ortlund EA, Bridgham JT, Redinbo MR, Thornton JW, (2007) Crystal structure of an ancient protein: evolution by conformational epistasis. Science 317: 1544-8.
-
(2007)
Science
, vol.317
, pp. 1544-1548
-
-
Ortlund, E.A.1
Bridgham, J.T.2
Redinbo, M.R.3
Thornton, J.W.4
-
15
-
-
33846551980
-
Empirical fitness landscapes reveal accessible evolutionary paths
-
Poelwijk FJ, Kiviet DJ, Weinreich DM, Tans SJ, (2007) Empirical fitness landscapes reveal accessible evolutionary paths. Nature 445: 383-6.
-
(2007)
Nature
, vol.445
, pp. 383-386
-
-
Poelwijk, F.J.1
Kiviet, D.J.2
Weinreich, D.M.3
Tans, S.J.4
-
16
-
-
70349464621
-
An epistatic ratchet constrains the direction of glucocorticoid receptor evolution
-
Bridgham JT, Ortlund EA, Thornton JW, (2009) An epistatic ratchet constrains the direction of glucocorticoid receptor evolution. Nature 461: 515-9.
-
(2009)
Nature
, vol.461
, pp. 515-519
-
-
Bridgham, J.T.1
Ortlund, E.A.2
Thornton, J.W.3
-
17
-
-
78049513394
-
An atlas of gene regulatory networks reveals multiple three-gene mechanisms for interpreting morphogen gradients
-
Cotterell J, Sharpe J, (2010) An atlas of gene regulatory networks reveals multiple three-gene mechanisms for interpreting morphogen gradients. Molecular Systems Biology 6: 425.
-
(2010)
Molecular Systems Biology
, vol.6
, pp. 425
-
-
Cotterell, J.1
Sharpe, J.2
-
18
-
-
33847268619
-
Robustness can evolve gradually in complex regulatory gene networks with varying topology
-
Ciliberti S, Martin OC, Wagner A, (2007) Robustness can evolve gradually in complex regulatory gene networks with varying topology. PLoS Comput Biol 3: 0164-0173.
-
(2007)
PLoS Comput Biol
, vol.3
, pp. 0164-0173
-
-
Ciliberti, S.1
Martin, O.C.2
Wagner, A.3
-
19
-
-
35348892535
-
Innovation and robustness in complex regulatory gene networks
-
Ciliberti S, Martin OC, Wagner A, (2007) Innovation and robustness in complex regulatory gene networks. Proc Natl Acad Sci U S A 104: 13591-6.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 13591-13596
-
-
Ciliberti, S.1
Martin, O.C.2
Wagner, A.3
-
21
-
-
33747615962
-
Evolutionary paths underlying flower color variation in Antirrhinum
-
Whibley AC, Langlade NB, Andalo C, Hanna AI, Bangham A, et al. (2006) Evolutionary paths underlying flower color variation in Antirrhinum. Science 313: 963-6.
-
(2006)
Science
, vol.313
, pp. 963-966
-
-
Whibley, A.C.1
Langlade, N.B.2
Andalo, C.3
Hanna, A.I.4
Bangham, A.5
-
22
-
-
34250214599
-
Evolution and development of inflorescence architectures
-
Prusinkiewicz P, Erasmus Y, Lane B, Harder LD, Coen E, (2007) Evolution and development of inflorescence architectures. Science 316: 1452-6.
-
(2007)
Science
, vol.316
, pp. 1452-1456
-
-
Prusinkiewicz, P.1
Erasmus, Y.2
Lane, B.3
Harder, L.D.4
Coen, E.5
-
23
-
-
65949084005
-
Canalization of gene expression in the Drosophila blastoderm by gap gene cross regulation
-
Manu, Surkova S, Spirov AV, Gursky VV, Janssens H, et al. (2009) Canalization of gene expression in the Drosophila blastoderm by gap gene cross regulation. PLoS Biol 7: 3.
-
(2009)
PLoS Biol
, vol.7
, pp. 3
-
-
Manu, S.S.1
Spirov, A.V.2
Gursky, V.V.3
Janssens, H.4
-
24
-
-
63549100975
-
Canalization of gene expression and domain shifts in the Drosophila blastoderm by dynamical attractors
-
Manu, Surkova S, Spirov AV, Gursky VV, Janssens H, et al. (2009) Canalization of gene expression and domain shifts in the Drosophila blastoderm by dynamical attractors. PLoS Comput Biol 5: 3.
-
(2009)
PLoS Comput Biol
, vol.5
, pp. 3
-
-
Manu, S.S.1
Spirov, A.V.2
Gursky, V.V.3
Janssens, H.4
-
25
-
-
84875246132
-
Quantitative Dynamics and Increased Variability of Segmentation Gene Expression in the Drosophila Kruppel and knirps mutants
-
Surkova S, Golubkova E, Manu, Panok L, Mamon L, et al. (2013) Quantitative Dynamics and Increased Variability of Segmentation Gene Expression in the Drosophila Kruppel and knirps mutants. Developmental Biology 13: 00013-4.
-
(2013)
Developmental Biology
, vol.13
, pp. 00013-00014
-
-
Surkova, S.1
Golubkova, E.2
Manu, P.L.3
Mamon, L.4
-
26
-
-
84876345100
-
Lack of tailless Leads to an Increase in Expression Variability in Drosophila Embryos
-
Janssens H, Crombach A, Wotton KR, Cicin-Sain D, Surkova S, et al. (2013) Lack of tailless Leads to an Increase in Expression Variability in Drosophila Embryos. Developmental Biology 13: 00015-8.
-
(2013)
Developmental Biology
, vol.13
, pp. 00015-00018
-
-
Janssens, H.1
Crombach, A.2
Wotton, K.R.3
Cicin-Sain, D.4
Surkova, S.5
-
27
-
-
17844374314
-
A synthetic multicellular system for programmed pattern formation
-
Basu S, Gerchman Y, Collins CH, Arnold FH, Weiss R, (2005) A synthetic multicellular system for programmed pattern formation. Nature 434: 1130-4.
-
(2005)
Nature
, vol.434
, pp. 1130-1134
-
-
Basu, S.1
Gerchman, Y.2
Collins, C.H.3
Arnold, F.H.4
Weiss, R.5
-
28
-
-
41349091647
-
Design and implementation of three incoherent feed-forward motif based biological concentration sensors
-
Entus R, Aufderheide B, Sauro HM, (2007) Design and implementation of three incoherent feed-forward motif based biological concentration sensors. Syst Synth Biol 1: 119-28.
-
(2007)
Syst Synth Biol
, vol.1
, pp. 119-128
-
-
Entus, R.1
Aufderheide, B.2
Sauro, H.M.3
-
29
-
-
67649840194
-
An externally tunable bacterial band-pass filter
-
Sohka T, Heins RA, Phelan RM, Greisler JM, Townsend CA, et al. (2009) An externally tunable bacterial band-pass filter. Proc Natl Acad Sci U S A 106: 10135-40.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 10135-10140
-
-
Sohka, T.1
Heins, R.A.2
Phelan, R.M.3
Greisler, J.M.4
Townsend, C.A.5
-
31
-
-
34548724489
-
The evolution of genetic networks by non-adaptive processes
-
Lynch M, (2007) The evolution of genetic networks by non-adaptive processes. Nat Rev Genet 10: 803-13.
-
(2007)
Nat Rev Genet
, vol.10
, pp. 803-813
-
-
Lynch, M.1
-
32
-
-
13144257707
-
The genetic theory of adaptation: a brief history
-
Orr HA, (2005) The genetic theory of adaptation: a brief history. Nat. Rev. Genet 6: 119.
-
(2005)
Nat. Rev. Genet
, vol.6
, pp. 119
-
-
Orr, H.A.1
-
34
-
-
0028897360
-
Mechanism of eve stripe formation
-
Reinitz J, Sharp DH, (1995) Mechanism of eve stripe formation. Mech Dev 49: 133-58.
-
(1995)
Mech Dev
, vol.49
, pp. 133-158
-
-
Reinitz, J.1
Sharp, D.H.2
|