-
1
-
-
18644383738
-
Histone methyltransferase activity of a Drosophila Polycomb group repressor complex
-
Müller J, et al. (2002) Histone methyltransferase activity of a Drosophila Polycomb group repressor complex. Cell 111(2):197-208.
-
(2002)
Cell
, vol.111
, Issue.2
, pp. 197-208
-
-
Müller, J.1
-
2
-
-
33845799903
-
Polycomb silencing mechanisms and the management of genomic programmes
-
Schwartz YB, Pirrotta V (2007) Polycomb silencing mechanisms and the management of genomic programmes. Nat Rev Genet 8(1):9-22.
-
(2007)
Nat Rev Genet
, vol.8
, Issue.1
, pp. 9-22
-
-
Schwartz, Y.B.1
Pirrotta, V.2
-
3
-
-
33845487512
-
SET domain protein lysine methyltransferases: Structure, specificity and catalysis
-
Qian C, Zhou MM (2006) SET domain protein lysine methyltransferases: Structure, specificity and catalysis. Cell Mol Life Sci 63(23):2755-2763.
-
(2006)
Cell Mol Life Sci
, vol.63
, Issue.23
, pp. 2755-2763
-
-
Qian, C.1
Zhou, M.M.2
-
4
-
-
17644410781
-
Nucleosome binding and histone methyltransferase activity of Drosophila PRC2
-
Nekrasov M, Wild B, Müller J (2005) Nucleosome binding and histone methyltransferase activity of Drosophila PRC2. EMBO Rep 6(4):348-353.
-
(2005)
EMBO Rep
, vol.6
, Issue.4
, pp. 348-353
-
-
Nekrasov, M.1
Wild, B.2
Müller, J.3
-
5
-
-
70349952171
-
Role of the polycomb protein EED in the propagation of repressive histone marks
-
Margueron R, et al. (2009) Role of the polycomb protein EED in the propagation of repressive histone marks. Nature 461(7265):762-767.
-
(2009)
Nature
, vol.461
, Issue.7265
, pp. 762-767
-
-
Margueron, R.1
-
6
-
-
78751662908
-
The Polycomb complex PRC2 and its mark in life
-
Margueron R, Reinberg D (2011) The Polycomb complex PRC2 and its mark in life. Nature 469(7330):343-349.
-
(2011)
Nature
, vol.469
, Issue.7330
, pp. 343-349
-
-
Margueron, R.1
Reinberg, D.2
-
7
-
-
77954676296
-
Origin of the polycomb repressive complex 2 and gene silencing by an E (z) homolog in the unicellular alga Chlamydomonas
-
Shaver S, Casas-Mollano JA, Cerny RL, Cerutti H (2010) Origin of the polycomb repressive complex 2 and gene silencing by an E (z) homolog in the unicellular alga Chlamydomonas. Epigenetics 5(4):301-312.
-
(2010)
Epigenetics
, vol.5
, Issue.4
, pp. 301-312
-
-
Shaver, S.1
Casas-Mollano, J.A.2
Cerny, R.L.3
Cerutti, H.4
-
8
-
-
33847070442
-
The role of chromatin during transcription
-
Li B, Carey M, Workman JL (2007) The role of chromatin during transcription. Cell 128(4):707-719.
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
9
-
-
79953754165
-
Polycomb repressive complex 2 controls the embryo-to-seedling phase transition
-
Bouyer D, et al. (2011) Polycomb repressive complex 2 controls the embryo-to-seedling phase transition. PLoS Genet 7(3):e1002014.
-
(2011)
PLoS Genet
, vol.7
, Issue.3
-
-
Bouyer, D.1
-
10
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer LA, et al. (2006) Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature 441(7091):349-353.
-
(2006)
Nature
, vol.441
, Issue.7091
, pp. 349-353
-
-
Boyer, L.A.1
-
11
-
-
33646870495
-
Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions
-
Bracken AP, Dietrich N, Pasini D, Hansen KH, Helin K (2006) Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions. Genes Dev 20(9):1123-1136.
-
(2006)
Genes Dev
, vol.20
, Issue.9
, pp. 1123-1136
-
-
Bracken, A.P.1
Dietrich, N.2
Pasini, D.3
Hansen, K.H.4
Helin, K.5
-
12
-
-
33646865180
-
Control of developmental regulators by Polycomb in human embryonic stem cells
-
Lee TI, et al. (2006) Control of developmental regulators by Polycomb in human embryonic stem cells. Cell 125(2):301-313.
-
(2006)
Cell
, vol.125
, Issue.2
, pp. 301-313
-
-
Lee, T.I.1
-
13
-
-
76149142791
-
Polycomb complexes act redundantly to repress genomic repeats and genes
-
Leeb M, et al. (2010) Polycomb complexes act redundantly to repress genomic repeats and genes. Genes Dev 24(3):265-276.
-
(2010)
Genes Dev
, vol.24
, Issue.3
, pp. 265-276
-
-
Leeb, M.1
-
14
-
-
78449265382
-
H3K27me3 profiling of the endosperm implies exclusion of polycomb group protein targeting by DNA methylation
-
Weinhofer I, Hehenberger E, Roszak P, Hennig L, Köhler C (2010) H3K27me3 profiling of the endosperm implies exclusion of polycomb group protein targeting by DNA methylation. PLoS Genet 6(10):6.
-
(2010)
PLoS Genet
, vol.6
, Issue.10
, pp. 6
-
-
Weinhofer, I.1
Hehenberger, E.2
Roszak, P.3
Hennig, L.4
Köhler, C.5
-
15
-
-
3042781030
-
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
-
Kirmizis A, et al. (2004) Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev 18(13):1592-1605.
-
(2004)
Genes Dev
, vol.18
, Issue.13
, pp. 1592-1605
-
-
Kirmizis, A.1
-
16
-
-
78751590899
-
Silencing chromatin: Comparing modes and mechanisms
-
Beisel C, Paro R (2011) Silencing chromatin: Comparing modes and mechanisms. Nat Rev Genet 12(2):123-135.
-
(2011)
Nat Rev Genet
, vol.12
, Issue.2
, pp. 123-135
-
-
Beisel, C.1
Paro, R.2
-
17
-
-
70349469565
-
Mechanisms of polycomb gene silencing: Knowns and unknowns
-
Simon JA, Kingston RE (2009) Mechanisms of polycomb gene silencing: Knowns and unknowns. Nat Rev Mol Cell Biol 10(10):697-708.
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, Issue.10
, pp. 697-708
-
-
Simon, J.A.1
Kingston, R.E.2
-
18
-
-
59949085939
-
H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome
-
Pauler FM, et al. (2009) H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome. Genome Res 19(2):221-233.
-
(2009)
Genome Res
, vol.19
, Issue.2
, pp. 221-233
-
-
Pauler, F.M.1
-
19
-
-
33745225872
-
Genome-wide analysis of Polycomb targets in Drosophila melanogaster
-
Schwartz YB, et al. (2006) Genome-wide analysis of Polycomb targets in Drosophila melanogaster. Nat Genet 38(6):700-705.
-
(2006)
Nat Genet
, vol.38
, Issue.6
, pp. 700-705
-
-
Schwartz, Y.B.1
-
20
-
-
34249068213
-
Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis
-
Zhang X, et al. (2007) Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis. PLoS Biol 5(5):e129.
-
(2007)
PLoS Biol
, vol.5
, Issue.5
-
-
Zhang, X.1
-
22
-
-
0037693853
-
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa
-
Tamaru H, et al. (2003) Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa. Nat Genet 34(1):75-79.
-
(2003)
Nat Genet
, vol.34
, Issue.1
, pp. 75-79
-
-
Tamaru, H.1
-
23
-
-
61949250367
-
Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa
-
Lewis ZA, et al. (2009) Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa. Genome Res 19(3):427-437.
-
(2009)
Genome Res
, vol.19
, Issue.3
, pp. 427-437
-
-
Lewis, Z.A.1
-
24
-
-
72949121660
-
The fungus Neurospora crassa displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9
-
Smith KM, et al. (2008) The fungus Neurospora crassa displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9. Epigenetics Chromatin 1(1):5.
-
(2008)
Epigenetics Chromatin
, vol.1
, Issue.1
, pp. 5
-
-
Smith, K.M.1
-
25
-
-
75649129700
-
Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis
-
Charron J-BF, He H, Elling AA, Deng XW (2009) Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis. Plant Cell 21(12):3732-3748.
-
(2009)
Plant Cell
, vol.21
, Issue.12
, pp. 3732-3748
-
-
Charron, J.-B.F.1
He, H.2
Elling, A.A.3
Deng, X.W.4
-
26
-
-
79955583542
-
Mapping and analysis of chromatin state dynamics in nine human cell types
-
Ernst J, et al. (2011) Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 473(7345):43-49.
-
(2011)
Nature
, vol.473
, Issue.7345
, pp. 43-49
-
-
Ernst, J.1
-
27
-
-
79953060951
-
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
-
Kharchenko PV, et al. (2011) Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. Nature 471(7339):480-485.
-
(2011)
Nature
, vol.471
, Issue.7339
, pp. 480-485
-
-
Kharchenko, P.V.1
-
28
-
-
33745604636
-
Suz12 binds to silenced regions of the genome in a cell-typespecific manner
-
Squazzo SL, et al. (2006) Suz12 binds to silenced regions of the genome in a cell-typespecific manner. Genome Res 16(7):890-900.
-
(2006)
Genome Res
, vol.16
, Issue.7
, pp. 890-900
-
-
Squazzo, S.L.1
-
29
-
-
77956995235
-
Genetic and microbiological research techniques for Neurospora crassa
-
Davis RH, De Serres FJ (1970) Genetic and microbiological research techniques for Neurospora crassa. Methods Enzymol 17 A: 47-143.
-
(1970)
Methods Enzymol
, vol.17 A
, pp. 47-143
-
-
Davis, R.H.1
De Serres, F.J.2
-
30
-
-
34250848131
-
Bird medium: An alternative to Vogel medium
-
Metzenberg RL (2004) Bird medium: An alternative to Vogel medium. Fungal Genet Newsl 51:19-20.
-
(2004)
Fungal Genet Newsl
, vol.51
, pp. 19-20
-
-
Metzenberg, R.L.1
-
31
-
-
12144287318
-
Lessons from the genome sequence of Neurospora crassa: Tracing the path from genomic blueprint to multicellular organism
-
Borkovich KA, et al. (2004) Lessons from the genome sequence of Neurospora crassa: Tracing the path from genomic blueprint to multicellular organism. Microbiol Mol Biol Rev 68(1):1-108.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, Issue.1
, pp. 1-108
-
-
Borkovich, K.A.1
-
32
-
-
33745924142
-
A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors
-
Colot HV, et al. (2006) A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors. Proc Natl Acad Sci USA 103(27):10352-10357.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.27
, pp. 10352-10357
-
-
Colot, H.V.1
-
33
-
-
33644866511
-
Chromatin assembly: A basic recipe with various flavours
-
Polo SE, Almouzni G (2006) Chromatin assembly: A basic recipe with various flavours. Curr Opin Genet Dev 16(2):104-111.
-
(2006)
Curr Opin Genet Dev
, vol.16
, Issue.2
, pp. 104-111
-
-
Polo, S.E.1
Almouzni, G.2
-
34
-
-
84855272671
-
Substitutions in the amino-terminal tail of neurospora histone H3 have varied effects on DNA methylation
-
Adhvaryu KK, Berge E, Tamaru H, Freitag M, Selker EU (2011) Substitutions in the amino-terminal tail of neurospora histone H3 have varied effects on DNA methylation. PLoS Genet 7(12):e1002423.
-
(2011)
PLoS Genet
, vol.7
, Issue.12
-
-
Adhvaryu, K.K.1
Berge, E.2
Tamaru, H.3
Freitag, M.4
Selker, E.U.5
-
35
-
-
79953046943
-
A cis-regulatory map of the Drosophila genome
-
Nègre N, et al. (2011) A cis-regulatory map of the Drosophila genome. Nature 471(7339):527-531.
-
(2011)
Nature
, vol.471
, Issue.7339
, pp. 527-531
-
-
Nègre, N.1
-
36
-
-
0037111831
-
Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
-
Kuzmichev A, Nishioka K, Erdjument-Bromage H, Tempst P, Reinberg D (2002) Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein. Genes Dev 16(22):2893-2905.
-
(2002)
Genes Dev
, vol.16
, Issue.22
, pp. 2893-2905
-
-
Kuzmichev, A.1
Nishioka, K.2
Erdjument-Bromage, H.3
Tempst, P.4
Reinberg, D.5
-
37
-
-
52649083766
-
Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa
-
Honda S, Selker EU (2008) Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa. Mol Cell Biol 28(19):6044-6055.
-
(2008)
Mol Cell Biol
, vol.28
, Issue.19
, pp. 6044-6055
-
-
Honda, S.1
Selker, E.U.2
-
38
-
-
79956066320
-
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
-
Roudier F, et al. (2011) Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J 30(10):1928-1938.
-
(2011)
EMBO J
, vol.30
, Issue.10
, pp. 1928-1938
-
-
Roudier, F.1
-
39
-
-
33746450910
-
Partitioning of the maize epigenome by the number of methyl groups on histone H3 lysines 9 and 27
-
Shi J, Dawe RK (2006) Partitioning of the maize epigenome by the number of methyl groups on histone H3 lysines 9 and 27. Genetics 173(3):1571-1583.
-
(2006)
Genetics
, vol.173
, Issue.3
, pp. 1571-1583
-
-
Shi, J.1
Dawe, R.K.2
-
40
-
-
34347324121
-
Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27
-
Turck F, et al. (2007) Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27. PLoS Genet 3(6):e86.
-
(2007)
PLoS Genet
, vol.3
, Issue.6
-
-
Turck, F.1
-
41
-
-
46049093174
-
Structural basis for the recognition of histone H4 by the histone-chaperone RbAp46
-
Murzina NV, et al. (2008) Structural basis for the recognition of histone H4 by the histone-chaperone RbAp46. Structure 16(7):1077-1085.
-
(2008)
Structure
, vol.16
, Issue.7
, pp. 1077-1085
-
-
Murzina, N.V.1
-
42
-
-
44149123117
-
Structural basis of histone H4 recognition by p55
-
Song JJ, Garlick JD, Kingston RE (2008) Structural basis of histone H4 recognition by p55. Genes Dev 22(10):1313-1318.
-
(2008)
Genes Dev
, vol.22
, Issue.10
, pp. 1313-1318
-
-
Song, J.J.1
Garlick, J.D.2
Kingston, R.E.3
-
43
-
-
33744544276
-
Regulation of flowering time by Arabidopsis MSI1
-
Bouveret R, Schönrock N, Gruissem W, Hennig L (2006) Regulation of flowering time by Arabidopsis MSI1. Development 133(9):1693-1702.
-
(2006)
Development
, vol.133
, Issue.9
, pp. 1693-1702
-
-
Bouveret, R.1
Schönrock, N.2
Gruissem, W.3
Hennig, L.4
-
44
-
-
33646872978
-
Chromatin signatures of pluripotent cell lines
-
Azuara V, et al. (2006) Chromatin signatures of pluripotent cell lines. Nat Cell Biol 8(5):532-538.
-
(2006)
Nat Cell Biol
, vol.8
, Issue.5
, pp. 532-538
-
-
Azuara, V.1
-
45
-
-
3042781030
-
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
-
Kirmizis A, et al. (2004) Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev 18(13):1592-1605.
-
(2004)
Genes Dev
, vol.18
, Issue.13
, pp. 1592-1605
-
-
Kirmizis, A.1
-
46
-
-
79955586204
-
Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation
-
Lafos M, et al. (2011) Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation. PLoS Genet 7(4):e1002040.
-
(2011)
PLoS Genet
, vol.7
, Issue.4
-
-
Lafos, M.1
-
47
-
-
76749164914
-
Alternative epigenetic chromatin states of polycomb target genes
-
Schwartz YB, et al. (2010) Alternative epigenetic chromatin states of polycomb target genes. PLoS Genet 6(1):e1000805.
-
(2010)
PLoS Genet
, vol.6
, Issue.1
-
-
Schwartz, Y.B.1
-
49
-
-
0030885667
-
DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa
-
Rountree MR, Selker EU (1997) DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa. Genes Dev 11(18):2383-2395.
-
(1997)
Genes Dev
, vol.11
, Issue.18
, pp. 2383-2395
-
-
Rountree, M.R.1
Selker, E.U.2
-
50
-
-
0037464589
-
The genome sequence of the filamentous fungus Neurospora crassa
-
Galagan JE, et al. (2003) The genome sequence of the filamentous fungus Neurospora crassa. Nature 422(6934):859-868.
-
(2003)
Nature
, vol.422
, Issue.6934
, pp. 859-868
-
-
Galagan, J.E.1
-
51
-
-
80052661967
-
Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma
-
Ellison CE, et al. (2011) Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma. Genetics 189(1):55-69.
-
(2011)
Genetics
, vol.189
, Issue.1
, pp. 55-69
-
-
Ellison, C.E.1
-
52
-
-
36549051577
-
Aligning multiple whole genomes with Mercator and MAVID
-
Dewey CN (2007) Aligning multiple whole genomes with Mercator and MAVID. Methods Mol Biol 395:221-236.
-
(2007)
Methods Mol Biol
, vol.395
, pp. 221-236
-
-
Dewey, C.N.1
-
53
-
-
0141519279
-
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
-
Li L, Stoeckert CJ, Jr., Roos DS (2003) OrthoMCL: Identification of ortholog groups for eukaryotic genomes. Genome Res 13(9):2178-2189.
-
(2003)
Genome Res
, vol.13
, Issue.9
, pp. 2178-2189
-
-
Li, L.1
Stoeckert Jr., C.J.2
Roos, D.S.3
-
54
-
-
0036529479
-
An efficient algorithm for large-scale detection of protein families
-
Enright AJ, Van Dongen S, Ouzounis CA (2002) An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res 30(7):1575-1584.
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.7
, pp. 1575-1584
-
-
Enright, A.J.1
Van Dongen, S.2
Ouzounis, C.A.3
-
55
-
-
18644368714
-
The Bioperl toolkit: Perl modules for the life sciences
-
Stajich JE, et al. (2002) The Bioperl toolkit: Perl modules for the life sciences. Genome Res 12(10):1611-1618.
-
(2002)
Genome Res
, vol.12
, Issue.10
, pp. 1611-1618
-
-
Stajich, J.E.1
|