메뉴 건너뛰기




Volumn 3, Issue SEP, 2012, Pages

Electron tomography of the nucleoid of gemmata obscuriglobus reveals complex liquid crystalline cholesteric structure

Author keywords

Cholesteric structure; Electron tomography; Gemmata obscuriglobus; Nucleoid; Planctomycetes

Indexed keywords


EID: 84875836360     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2012.00326     Document Type: Article
Times cited : (15)

References (46)
  • 1
    • 0035239219 scopus 로고    scopus 로고
    • Cryosubstitution of frozen biological specimens in electron microscopy: use and application as an alternative to chemical fixation
    • Bohrmann, B., and Kellenberger, E. (2001). Cryosubstitution of frozen biological specimens in electron microscopy: use and application as an alternative to chemical fixation. Micron 32, 11-19.
    • (2001) Micron , vol.32 , pp. 11-19
    • Bohrmann, B.1    Kellenberger, E.2
  • 2
    • 0025808921 scopus 로고
    • Coralline shape of the bacterial nucleoid after cryofixation
    • Bohrmann, B., Villiger, W., Johansen, R., and Kellenberger, E. (1991). Coralline shape of the bacterial nucleoid after cryofixation. J. Bacteriol. 173, 3149-3158.
    • (1991) J. Bacteriol. , vol.173 , pp. 3149-3158
    • Bohrmann, B.1    Villiger, W.2    Johansen, R.3    Kellenberger, E.4
  • 3
    • 0014378879 scopus 로고
    • The fibrillary structure and orientation of chromosomes in Dinoflagellata
    • Bouligand,Y.,Soyer,M.O.,and Puiseux-Dao, S. (1968). The fibrillary structure and orientation of chromosomes in Dinoflagellata. Chromosoma 24, 251-287.
    • (1968) Chromosoma , vol.24 , pp. 251-287
    • Bouligand, Y.1    Soyer, M.O.2    Puiseux-Dao, S.3
  • 4
    • 78649640318 scopus 로고    scopus 로고
    • Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression
    • Browning, D. F., Grainger, D. C., and Busby, S. J. (2010). Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression. Curr. Opin. Microbiol. 13, 773-780.
    • (2010) Curr. Opin. Microbiol. , vol.13 , pp. 773-780
    • Browning, D.F.1    Grainger, D.C.2    Busby, S.J.3
  • 5
    • 77957778183 scopus 로고    scopus 로고
    • Birefringence and DNA condensation of liquid crystalline chromosomes
    • Chow, M. H., Yan, K. T., Bennett, M. J., and Wong, J. T. (2010). Birefringence and DNA condensation of liquid crystalline chromosomes. Eukaryot. Cell 9, 1577-1587.
    • (2010) Eukaryot. Cell , vol.9 , pp. 1577-1587
    • Chow, M.H.1    Yan, K.T.2    Bennett, M.J.3    Wong, J.T.4
  • 6
    • 0020998470 scopus 로고
    • Supercoiling of 30-nm chromatin fibers around a nuclear axis in human retinal pigment cell nuclei: electron microscope evidence for a chromatin macrostructure
    • Diaz, G. (1983). Supercoiling of 30-nm chromatin fibers around a nuclear axis in human retinal pigment cell nuclei: electron microscope evidence for a chromatin macrostructure. Cell Biol. Int. Rep. 7, 1017-1023.
    • (1983) Cell Biol. Int. Rep. , vol.7 , pp. 1017-1023
    • Diaz, G.1
  • 7
    • 74349126563 scopus 로고    scopus 로고
    • Horizontally acquired homologues of the nucleoid-associated protein H-NS: implications for gene regulation
    • Dorman, C. J. (2010). Horizontally acquired homologues of the nucleoid-associated protein H-NS: implications for gene regulation. Mol. Microbiol. 75, 264-267.
    • (2010) Mol. Microbiol. , vol.75 , pp. 264-267
    • Dorman, C.J.1
  • 8
    • 26444525344 scopus 로고    scopus 로고
    • Dynamics of chromatin during the repair of DNA double-strand breaks
    • Downs, J. A., and Cote, J. (2005). Dynamics of chromatin during the repair of DNA double-strand breaks. Cell Cycle 4, 1373-1376.
    • (2005) Cell Cycle , vol.4 , pp. 1373-1376
    • Downs, J.A.1    Cote, J.2
  • 9
    • 28044437733 scopus 로고    scopus 로고
    • Fine structure of the Deinococcus radiodurans nucleoid revealed by cryoelectron microscopy of vitreous sections
    • Eltsov, M., and Dubochet, J. (2005). Fine structure of the Deinococcus radiodurans nucleoid revealed by cryoelectron microscopy of vitreous sections. J. Bacteriol. 187, 8047-8054.
    • (2005) J. Bacteriol. , vol.187 , pp. 8047-8054
    • Eltsov, M.1    Dubochet, J.2
  • 10
    • 33750526675 scopus 로고    scopus 로고
    • Transmission electron microscopy of the bacterial nucleoid
    • Eltsov, M., and Zuber, B. (2006). Transmission electron microscopy of the bacterial nucleoid. J. Struct. Biol. 156, 246-254.
    • (2006) J. Struct. Biol. , vol.156 , pp. 246-254
    • Eltsov, M.1    Zuber, B.2
  • 12
    • 79956136196 scopus 로고    scopus 로고
    • Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function
    • Fuerst, J. A., and Sagulenko, E. (2011). Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function. Nat. Rev. Microbiol. 9, 403-413.
    • (2011) Nat. Rev. Microbiol. , vol.9 , pp. 403-413
    • Fuerst, J.A.1    Sagulenko, E.2
  • 13
    • 0025823615 scopus 로고
    • Membrane-bounded nucleoid in the eubacterium Gemmatata obscuriglobus
    • Fuerst, J. A., and Webb, R. I. (1991). Membrane-bounded nucleoid in the eubacterium Gemmatata obscuriglobus. Proc. Natl. Acad. Sci. U.S.A. 88, 8184-8188.
    • (1991) Proc. Natl. Acad. Sci. U. S. A. , vol.88 , pp. 8184-8188
    • Fuerst, J.A.1    Webb, R.I.2
  • 14
    • 0002568212 scopus 로고
    • Electron-microscopy of the chromosomes of dinoflagellates in situ Confirmation of Bouligand liquidcrystal hypothesis
    • Gautier, A., Michelsalamin, L., Tosicouture, E., Mcdowall, A. W., and Dubochet, J. (1986). Electron-microscopy of the chromosomes of dinoflagellates in situ Confirmation of Bouligand liquidcrystal hypothesis. J. Ultrastruct. Mol. Struct. Res. 97, 10-30.
    • (1986) J. Ultrastruct. Mol. Struct. Res. , vol.97 , pp. 10-30
    • Gautier, A.1    Michelsalamin, L.2    Tosicouture, E.3    Mcdowall, A.W.4    Dubochet, J.5
  • 15
    • 0018658397 scopus 로고
    • Ultrastructural cytochemistry in a dinoflagellate I. Preliminary results concerning reaction end-products localized on the surface of crystalline cores of fibrous trichocysts
    • Gautier, A., Soyer, M. O., and Fakan, J. (1979). Ultrastructural cytochemistry in a dinoflagellate. I. Preliminary results concerning reaction end-products localized on the surface of crystalline cores of fibrous trichocysts. Acta Histochem. Suppl. 20, 95-104.
    • (1979) Acta Histochem. Suppl. , vol.20 , pp. 95-104
    • Gautier, A.1    Soyer, M.O.2    Fakan, J.3
  • 16
  • 19
    • 33750000118 scopus 로고    scopus 로고
    • Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome
    • Grainger,D.C.,Hurd,D.,Goldberg, M. D., and Busby, S. J. (2006). Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome. Nucleic Acids Res. 34, 4642-4652.
    • (2006) Nucleic Acids Res , vol.34 , pp. 4642-4652
    • Grainger, D.C.1    Hurd, D.2    Goldberg, M.D.3    Busby, S.J.4
  • 21
    • 0020586635 scopus 로고
    • Thenativestructureofdinoflagellate chromosomes and their stabilization by Ca2+ and Mg2+ cations
    • Herzog, M., and Soyer, M. O. (1983). Thenativestructureofdinoflagellate chromosomes and their stabilization by Ca2+ and Mg2+ cations. Eur. J. Cell Biol. 30, 33-41.
    • (1983) Eur. J. Cell Biol. , vol.30 , pp. 33-41
    • Herzog, M.1    Soyer, M.O.2
  • 22
    • 0023276113 scopus 로고
    • Use of on-section immunolabeling and cryosubstitution for studies of bacterial-DNA distribution
    • Hobot, J. A., Bjornsti, M. A., and Kellenberger, E. (1987). Use of on-section immunolabeling and cryosubstitution for studies of bacterial-DNA distribution. J. Bacteriol. 169, 2055-2062.
    • (1987) J. Bacteriol. , vol.169 , pp. 2055-2062
    • Hobot, J.A.1    Bjornsti, M.A.2    Kellenberger, E.3
  • 23
    • 0026685334 scopus 로고
    • Chromatins of low-protein content: special features of their compaction and condensation
    • Kellenberger, E., and Arnold-SchulzGahmen, B. (1992). Chromatins of low-protein content: special features of their compaction and condensation. FEMS Microbiol. Lett. 79, 361-370.
    • (1992) FEMS Microbiol. Lett. , vol.79 , pp. 361-370
    • Kellenberger, E.1    Arnold-SchulzGahmen, B.2
  • 25
    • 63049083960 scopus 로고    scopus 로고
    • The cell cycle of the planctomycete Gemmata obscuriglobus with respect to cell compartmentalization
    • Lee, K. C., Webb, R. I., and Fuerst, J. A. (2009). The cell cycle of the planctomycete Gemmata obscuriglobus with respect to cell compartmentalization. BMC Cell Biol. 10, 4.
    • (2009) BMC Cell Biol , vol.10 , pp. 4
    • Lee, K.C.1    Webb, R.I.2    Fuerst, J.A.3
  • 26
    • 54149086099 scopus 로고    scopus 로고
    • Divalent cation distribution in dinoflagellate chromosomes imaged by high-resolution ion probe mass spectrometry
    • Levi-Setti,R.,Gavrilov,K.L.,and Rizzo, P. J. (2008). Divalent cation distribution in dinoflagellate chromosomes imaged by high-resolution ion probe mass spectrometry. Eur. J. Cell Biol. 87, 963-976.
    • (2008) Eur. J. Cell Biol. , vol.87 , pp. 963-976
    • Levi-Setti, R.1    Gavrilov, K.L.2    Rizzo, P.J.3
  • 27
    • 62649088069 scopus 로고    scopus 로고
    • Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus
    • Lieber, A., Leis, A., Kushmaro, A., Minsky, A., and Medalia, O. (2009). Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus. J. Bacteriol. 191, 1439-1445.
    • (2009) J. Bacteriol. , vol.191 , pp. 1439-1445
    • Lieber, A.1    Leis, A.2    Kushmaro, A.3    Minsky, A.4    Medalia, O.5
  • 28
    • 0034937657 scopus 로고    scopus 로고
    • Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell
    • Lindsay, M. R., Webb, R. I., Strous, M., Jetten, M. S., Butler, M. K., Forde, R. J., and Fuerst, J. A. (2001). Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell. Arch. Microbiol. 175, 413-429.
    • (2001) Arch. Microbiol. , vol.175 , pp. 413-429
    • Lindsay, M.R.1    Webb, R.I.2    Strous, M.3    Jetten, M.S.4    Butler, M.K.5    Forde, R.J.6    Fuerst, J.A.7
  • 29
    • 44949277387 scopus 로고
    • Ordered phases of DNA in vivo and in vitro
    • Livolant, F. (1991). Ordered phases of DNA in vivo and in vitro. Physica A 176, 117-137.
    • (1991) Physica A , vol.176 , pp. 117-137
    • Livolant, F.1
  • 31
    • 0031558565 scopus 로고    scopus 로고
    • Nucleosomes: a solution to a crowded intracellular environment?
    • Minsky, A., Ghirlando, R., and Reich, Z. (1997). Nucleosomes: a solution to a crowded intracellular environment? J. Theor. Biol. 188, 379-385.
    • (1997) J Theor. Biol. , vol.188 , pp. 379-385
    • Minsky, A.1    Ghirlando, R.2    Reich, Z.3
  • 32
    • 35548978064 scopus 로고    scopus 로고
    • H-NS promotes looped domain formation in the bacterial chromosome
    • Noom, M. C., Navarre, W. W., Oshima, T.,Wuite,G.J.,andDame,R. T. (2007). H-NS promotes looped domain formation in the bacterial chromosome. Curr. Biol. 17, R913-R914.
    • (2007) Curr. Biol. , vol.17
    • Noom, M.C.1    Navarre, W.W.2    Oshima, T.3    Wuite, G.J.4    Dame, R.T.5
  • 33
    • 0024744558 scopus 로고
    • Electron microscopy of liquid crystalline DNA: direct evidence for cholesteric-like organization of DNA in dinoflagellate chromosomes
    • Rill, R. L., Livolant, F., Aldrich, H. C., and Davidson, M. W. (1989). Electron microscopy of liquid crystalline DNA: direct evidence for cholesteric-like organization of DNA in dinoflagellate chromosomes. Chromosoma 98, 280-286.
    • (1989) Chromosoma , vol.98 , pp. 280-286
    • Rill, R.L.1    Livolant, F.2    Aldrich, H.C.3    Davidson, M.W.4
  • 35
    • 0015515889 scopus 로고
    • Chromosomal proteins in the dinoflagellate alga Gyrodinium cohnii
    • Rizzo, P. J., and Nooden, L. D. (1972). Chromosomal proteins in the dinoflagellate alga Gyrodinium cohnii. Science 176, 796-797.
    • (1972) Science , vol.176 , pp. 796-797
    • Rizzo, P.J.1    Nooden, L.D.2
  • 36
    • 84859357011 scopus 로고    scopus 로고
    • A full suite of histone and histone modifying genes are transcribed in the dinoflagellate Lingulodinium
    • doi: 10.1371/journal.pone.0034340
    • Roy, S., and Morse, D. (2012). A full suite of histone and histone modifying genes are transcribed in the dinoflagellate Lingulodinium. PLoS ONE 7:e34340. doi: 10.1371/journal.pone.0034340
    • (2012) PLoS ONE , vol.7
    • Roy, S.1    Morse, D.2
  • 38
    • 0343240577 scopus 로고
    • Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling
    • Sinden,R.R.,andPettijohn,D.E. (1981). Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling. Proc. Natl. Acad. Sci. U.S.A. 78, 224-228.
    • (1981) Proc. Natl. Acad. Sci. U. S. A. , vol.78 , pp. 224-228
    • Sinden, R.R.1    Pettijohn, D.E.2
  • 39
    • 33750954891 scopus 로고    scopus 로고
    • Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis
    • Skoko, D., Yoo, D., Bai, H., Schnurr, B.,Yan,J.,McLeod,S.M.,Marko, J. F., and Johnson, R. C. (2006). Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis. J. Mol. Biol. 364, 777-798.
    • (2006) J. Mol. Biol. , vol.364 , pp. 777-798
    • Skoko, D.1    Yoo, D.2    Bai, H.3    Schnurr, B.4    Yan, J.5    McLeod, S.M.6    Marko, J.F.7    Johnson, R.C.8
  • 41
    • 27144448812 scopus 로고    scopus 로고
    • The bacterial nucleoid: a highly organized and dynamic structure
    • Thanbichler, M., Wang, S. C., and Shapiro, L. (2005). The bacterial nucleoid: a highly organized and dynamic structure. J. Cell. Biochem. 96, 506-521.
    • (2005) J. Cell. Biochem. , vol.96 , pp. 506-521
    • Thanbichler, M.1    Wang, S.C.2    Shapiro, L.3
  • 44
    • 0038143248 scopus 로고    scopus 로고
    • Histonelike proteins of the dinoflagellate Crypthecodinium cohnii have homologies to bacterial DNAbinding proteins
    • Wong,J.T.,New,D.C.,Wong,J.C., and Hung, V. K. (2003). Histonelike proteins of the dinoflagellate Crypthecodinium cohnii have homologies to bacterial DNAbinding proteins. Eukaryot. Cell 2, 646-650.
    • (2003) Eukaryot. Cell , vol.2 , pp. 646-650
    • Wong, J.T.1    New, D.C.2    Wong, J.C.3    Hung, V.K.4
  • 45
    • 79551529513 scopus 로고    scopus 로고
    • Chromatin dynamics and the repair of DNA double strand breaks
    • Xu, Y., and Price, B. D. (2011). Chromatin dynamics and the repair of DNA double strand breaks. Cell Cycle 10, 261-267.
    • (2011) Cell Cycle , vol.10 , pp. 261-267
    • Xu, Y.1    Price, B.D.2
  • 46
    • 79959981690 scopus 로고    scopus 로고
    • Making heads or tails of the HU proteins in the planctomycete Gemmata obscuriglobus
    • Yee, B., Sagulenko, E., and Fuerst, J. A. (2011). Making heads or tails of the HU proteins in the planctomycete Gemmata obscuriglobus. Microbiology 157(Pt 7), 2012-2021.
    • (2011) Microbiology , vol.157 , Issue.PART 7 , pp. 2012-2021
    • Yee, B.1    Sagulenko, E.2    Fuerst, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.