Bacterioplankton community composition in Portuguese water bodies under a severe summer drought

Community Ecology

Volumn 13, Issue 2, 2012, Pages 185-193

  De Figueiredo, D R ^a   Castro, B B ^a   Pereira, M J ^a   Correia, A ^a  

^a UNIVERSITY OF AVEIRO   (Portugal)

Author keywords

16SrDNA DGGE analysis; Bacterial diversity; Drought; Freshwater bodies; Southern Europe

Indexed keywords

BACTERIOPLANKTON; BACTERIUM; COMMUNITY COMPOSITION; CYANOBACTERIUM; DRINKING WATER; DROUGHT; ENVIRONMENTAL FACTOR; GEOGRAPHICAL DISTRIBUTION; PERSISTENCE; PHYSICOCHEMICAL PROPERTY; PUBLIC HEALTH; RESERVOIR; RISK ASSESSMENT; SPECIES DIVERSITY; SUMMER; TROPHIC CONDITIONS; WATER QUALITY;

PORTUGAL;

ACTINOBACTERIA; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); BACTEROIDETES; BETAPROTEOBACTERIA; CYANOBACTERIA;

EID: 84875744271     PISSN: 15858553     EISSN: 15882756     Source Type: Journal    
DOI: 10.1556/ComEc.13.2012.2.8     Document Type: Article

References (55)

1. Allgaier, M. and H. P. Grossart. 2006. Diversity and seasonal dynamics of Actinobacteria populations in four lakes in Northeastern Germany. Appl. Environ. Microbiol. 72: 3489-3497. (Pubitemid 43728003)
2. Andreazza, R., B. C. Okeke, S. Pieniz, L. Bortolon, M. R. Lambais and F. A. O. Camargo. 2011. Effects of Stimulation of Copper Bioleaching on Microbial Community in Vineyard Soil and Copper Mining Waste. Biol. Trace Elem. Res. DOI: 10.1007/s12011-12011-19213-12018.
3. Antunes, S. C., D. R. de Figueiredo, S. M. Marques, B. B. Castro, R. Pereira and F. Gonçalves. 2007. Evaluation of water column and sediment toxicity from an abandoned uranium mine using a battery of bioassays. Sci. Total Environ. 374: 252-259.
4. APHA. 1995. Standard Methods for the Examination of Water and Wastewater. American Public Health Association, Washington, DC.
5. Baptista, M. S. and M. T. Vasconcelos. 2006. Cyanobacteria metal interactions: Requirements, toxicity, and ecological implications. Crit. Rev. Microbiol. 32: 127-137. (Pubitemid 44221659)
6. Bobos, I., N. Durães and F. Noronha. 2006. Mineralogy and geochemistry of mill tailings impoundments from Algares (Aljus-trel), Portugal: Implications for acid sulfate mine waters formation. J. Geochem. Explor. 88: 1-5. (Pubitemid 43173787)
7. Bond, N., P. Lake and A. Arthington. 2008. The impacts of drought on freshwater ecosystems: an Australian perspective. Hydrobi-ologia 600: 3-16.
8. Brümmer, I. H. M., W. Fehr and I. Wagner-Döbler. 2000. Biofilm community structure in polluted rivers: Abundance of dominant phylogenetic groups over a complete annual cycle. Appl. Environ. Microbiol. 66: 3078-3082. (Pubitemid 30497621)
9. Caetano, S., R. Miguel, P. Mendes, H. Galvão and A. Barbosa. 2001. Cyanobacteria blooms and cyanotoxin occurrence in the Guadi-ana (SE Portugal) - preliminary results. Ecotox. Environ. Restoration 4: 53-59.
10. Carvalho, F. P., J. M. Oliveira, I. Lopes and A. Batista. 2007. Ra-dionuclides from past uranium mining in rivers of Portugal. J. Environ. Radioact. 98: 298-314. (Pubitemid 350123565)
11. Castro, B. B., S. C. Antunes, R. Pereira, A. M. V. M. Soares and F. Gonçalves. 2005. Rotifer community structure in three shallow lakes: Seasonal fluctuations and explanatory factors. Hydrobi-ologia 543: 221-232. (Pubitemid 40886288)
12. Charron, D. F., M. K. Thomas, D. Waltner-Toews, J. J. Aramini, T. Edge, R. A. Kent, A. R. Maarouf and J. Wilson. 2004. Vulnerability of waterborne diseases to climate change in Canada: A review. J. Toxicol. Environ. Health - Part A 67: 1667-1677. (Pubitemid 39299607)
13. Codd, G. A. 2000. Cyanobacterial toxins, the perception of water quality, and the prioritisation of eutrophication control. Ecol. Eng. 16: 51-60.
14. de Figueiredo, D. R., U. M. Azeiteiro, S. M. Esteves, F. J. M. Gonçalves and M. J. Pereira. 2004. Microcystin-producing blooms - A serious global public health issue. Ecotox. Environ. Saf. 59: 151-163. (Pubitemid 39140917)
15. de Figueiredo, D. R., M. J. Pereira and A. Correia. 2010. Seasonal modulation of bacterioplankton community at a temperate eu-trophic shallow lake. World J. Microbiol. Biotechnol. 26: 1067-1077.
16. de Figueiredo, D. R., M. J. Pereira, A. Moura, L. Silva, S. Bárrios, F. Fonseca, I. Henriques and A. Correia. 2007. Bacterial community composition over a dry winter in meso- and eutrophic Portuguese water bodies. FEMS Microbiol. Ecol. 59: 638-650. (Pubitemid 46376238)
17. de Figueiredo, D. R., A. S. S. P. Reboleira, S. C. Antunes, N. Abran-tes, U. Azeiteiro, F. Gonçalves and M. J. Pereira. 2006. The effect of environmental parameters and cyanobacterial blooms on phytoplankton dynamics of a Portuguese temperate lake. Hydro-biologia 568: 145-157. (Pubitemid 44174675)
18. De Oliveira Araújo, F. 1995. Effects of cyanobacteria on drinking water and human health: An epidemiological study in Evora, Portugal. Assessing and Managing Health Risks from Drinking Water Contamination: Approaches and Applications (Proceedings of the Rome Symposium, September 1994) 233: 101-110.
19. De Wever, A., K. Muylaert, K. Van Der Gucht, S. Pirlot, C. Cocquyt, J. P. Descy, P. D. Plisnier and W. Vyverman. 2005. Bacterial community composition in Lake Tanganyika: vertical and horizontal heterogeneity. Appl. Environ. Microbiol. 71: 5029-5037. (Pubitemid 41338227)
20. Dokulil, M. T. and K. Teubner. 2000. Cyanobacterial dominance in lakes. Hydrobiologia 438: 1-12. (Pubitemid 32106264)
21. Domingues, R. B., A. Barbosa and H. Galvão. 2005. Nutrients, light and phytoplankton succession in a temperate estuary (the Guadi-ana, south-western Iberia). Estuarine Coastal Shelf Sci. 64: 249-260. (Pubitemid 40938530)
22. Dorigo, U., L. Volatier and J. F. Humbert. 2005. Molecular approaches to the assessment of biodiversity in aquatic microbial communities. Water Res. 39: 2207-2218. (Pubitemid 40840673)
23. Eiler, A. and S. Bertilsson. 2004. Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes. Environ. Microbiol. 6: 1228-1243. (Pubitemid 39606293)
24. Glenn, T. C. 2011. Field guide to next-generation DNA sequencers. Mol Ecol Resources 11: 759-769.
25. Greer, A., V. Ng and D. Fisman. 2008. Climate change and infectious diseases in North America: The road ahead. Can. Med. Assoc. J. 178: 715-722. (Pubitemid 351441472)
26. Jardillier, L., D. Boucher, S. Personnic, S. Jacquet, A. Thénot, D. Sargos, C. Amblard and D. Debroas. 2005. Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: Microcosm experiments. FEMS Microbiol. Ecol. 53: 429-443. (Pubitemid 40966602)
27. Lyautey, E., B. Lacoste, L. Ten-Hage, J. L. Rols and F. Garabetian. 2005. Analysis of bacterial diversity in river biofilms using 16S rDNA PCR-DGGE: Methodological settings and fingerprints interpretation. Water Res. 39: 380-388. (Pubitemid 40092166)
28. Marzorati, M., L. Wittebolle, N. Boon, D. Daffonchio and W. Ver-straete. 2008. How to get more out of molecular fingerprints: Practical tools for microbial ecology. Environ. Microbiol. 10: 1571-1581. (Pubitemid 351670255)
29. Masciopinto, C., R. La Mantia, A. Carducci, B. Casini, A. Calvario and E. Jatta. 2007. Unsafe tap water in households supplied from groundwater in the Salento Region of Southern Italy. J. Water Health 5: 129-148. (Pubitemid 46420076)
30. Monteiro, M. T., R. Oliveira and C. Vale. 1995. Metal stress on the plankton communities of Sado River (Portugal). Water Res. 29: 695-701.
31. Moreno, I., A. Cameán, M. J. Tavares, P. Pereira and S. Franca. 2003. Toxicity of cyanobacteria isolated from the Guadiana River. Aquat. Ecosys. Health Manage. 6: 409-413. (Pubitemid 38051314)
32. Moreno, I., G. Repetto, E. Carballal, A. Gago and A. M. Cameán. 2005. Cyanobacteria and microcystins occurrence in the Guadi-ana River (SW Spain). Int. J. Environ. Anal. Chem.85: 461-474. (Pubitemid 43879379)
33. Moreno, I. M., P. Pereira, S. Franca and A. Cameán. 2004. Toxic cyanobacteria strains isolated from blooms in the Guadiana River (southwestern Spain). Biol. Res. 37: 405-417. (Pubitemid 39430132)
34. Muylaert, K., K. Van der Gucht, N. Vloemans, L. De Meester, M. Gillis and W. Vyverman. 2002. Relationship between bacterial community composition and bottom-up versus top-down variables in four eutrophic shallow lakes. Appl. Environ. Microbiol. 68: 4740-4750. (Pubitemid 35154776)
35. Muyzer, G., E. C. De Waal and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700. (Pubitemid 23072343)
36. Page, R. D. M. 1996. Tree View: An application to display phyloge-netic trees on personal computers. Comput. Appl. Biosci. 12: 357-358.
37. Portillo, M. C. and J. M. Gonzalez. 2008. Statistical differences between relative quantitative molecular fingerprints from micro-bial communities. Antonie van Leeuwenhoek 1-7.
38. Pouria, S., A. De Andrade, J. Barbosa, R. L. Cavalcanti, V. T. S. Barreto, C. J. Ward, W. Preiser, G. K. Poon, G. H. Neild and G. A. Codd. 1998. Fatal microcystin intoxication in haemodialysis unit in Caruaru, Brazil. Lancet 352: 21-26. (Pubitemid 28306561)
39. Rocha, C., H. Galvão and A. Barbosa. 2002. Role of transient silicon limitation in the development of cyanobacteria blooms in the Guadiana estuary, south-western Iberia. Mar. Ecol. Prog. Ser. 228: 35-45. (Pubitemid 34264622)
40. Rodier, J. 1996. L'analyse de l'eau: Eaux Naturelles, Eaux Reísiduaires, Eau de mer. Dunod, Paris.
41. Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
42. Saker, M. L., I. C. G. Nogueira, V. M. Vasconcelos, B. A. Neilan, G. K. Eaglesham and P. Pereira. 2003. First report and toxicologi-cal assessment of the cyanobacterium Cylindrospermopsis raciborskii from Portuguese freshwaters. Ecotox. Environ. Saf. 55: 243-250. (Pubitemid 36555411)
43. Smith, J. L., G. L. Boyer and P. V. Zimba. 2008. A review of cyano-bacterial odorous and bioactive metabolites: Impacts and management alternatives in aquaculture. Aquaculture 208: 5-20.
44. ter Braak, C. J. F. 1995. Data Analysis in Community and Landscape Ecology. Jongman, R. H. G., C. J. F. ter Braak, O. F. R. Tongeren (eds). Cambridge, UK: Cambridge University Press. pp. 91-173.
45. Thompson, J. D., D. G. Higgins and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680. (Pubitemid 24354800)
46. Valério, E., P. Pereira, M. L. Saker, S. Franca and R. Tenreiro. 2005. Molecular characterization of Cylindrospermopsis raciborskii strains isolated from Portuguese freshwaters. Harmful Algae 4: 1044-1052. (Pubitemid 41562269)
47. Van Der Gucht, K., K. Cottenie, K. Muylaert, N. Vloemans, S. Cousin, S. Declerck, E. Jeppesen, J. M. Conde-Porcuna, K. Schwenk, G. Zwart, H. Degans, W. Vyverman and L. De Meester. 2007. The power of species sorting: Local factors drive bacterial community composition over a wide range of spatial scales. Proc. Nat. Acad. Sci. USA 104: 20404-20409.
48. Van der Gucht, K., K. Sabbe, L. De Meester, N. Vloemans, G. Zwart, M. Gillis and W. Vyverman. 2001. Contrasting bacterioplank-ton community composition and seasonal dynamics in two neighbouring hypertrophic freshwater lakes. Environ. Micro-biol. 3: 680-690. (Pubitemid 34054299)
49. Van Der Gucht, K., T. Vandekerckhove, N. Vloemans, S. Cousin, K. Muylaert, K. Sabbe, M. Gillis, S. Declerk, L. De Meester and W. Vyverman. 2005. Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure. FEMS Microbiol. Ecol. 53: 205-220. (Pubitemid 40798871)
50. Vasconcelos, V. M. 1999. Cyanobacterial toxins in Portugal: Effects on aquatic animals and risk for human health. Braz. J. Med. Biol Res 32: 249-254. (Pubitemid 129538880)
51. Vasconcelos, V. 2001. Toxic freshwater cyanobacteria and their toxins in Portugal. In: Chorus, I. (ed). Cyanotoxins - Occurrence, Causes, Consequences. Springer, Berlin. pp. 62-67.
52. Vasconcelos, V. M., K. Sivonen, W. R. Evans, W. W. Carmichael and M. Namikoshi. 1996. Hepatotoxic microcystin diversity in cyanobacterial blooms collected in Portuguese freshwaters. Water Res. 30: 2377-2384.
53. Wiedner, C., J. Rücker, R. Brüggemann and B. Nixdorf. 2007. Climate change affects timing and size of populations of an invasive cyanobacterium in temperate regions. Oecologia 152: 473-484. (Pubitemid 46776461)
54. Ye, L., M.-F. Shao, T. Zhang, A. H. Y. Tong and S. Lok. 2011. Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrose-quencing. Water Res. 45: 4390-4398.
55. Zaitlin, B. and S. B. Watson. 2006. Actinomycetesin relation to taste and odour in drinking water: Myths, tenets and truths. Water Res. 40: 1741-1753.