Proteomic profiles and kinetics of development of bacteriophage T4 and its ri and riii mutants in slowly growing Escherichia coli

Journal of General Virology

Volumn 94, Issue PART4, 2013, Pages 896-905

  Golec, Piotr ^a   Karczewska Golec, Joanna ^b   Voigt, Birgit ^c   Albrecht, Dirk ^c   Schweder, Thomas ^c   Hecker, Michael ^c   Wȩgrzyn, Grzegorz ^a   Łoś, Marcin ^a,d,e  

^a UNIVERSITY OF GDA SK   (Poland)

^b MEDICAL UNIVERSITY OF GDANSK   (Poland)

^c UNIVERSITY OF GREIFSWALD   (Germany)

^d POLISH ACADEMY OF SCIENCES   (Poland)

^e not available   (Poland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM LYSATE; PROTEOME;

ARTICLE; BACTERIAL GROWTH; BACTERIOLYSIS; BACTERIOPHAGE T4; CHEMOSTAT; ESCHERICHIA COLI; GROWTH REGULATION; MICROBIAL KINETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEOMICS; TWO DIMENSIONAL GEL ELECTROPHORESIS; VIRION; VIROGENESIS; VIRUS CELL INTERACTION; VIRUS GENE; VIRUS LATENCY; VIRUS MUTANT; WILD TYPE;

EID: 84875658113     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.048686-0     Document Type: Article

References (31)

1. Abedon, S. T. (1994). Lysis and interaction between free phage and infected cells. In Molecular Biology of Bacteriophage T4, pp. 397-405. Edited by J. D. Karam. Washington, DC: American Society for Microbiology.
2. Abedon, S. T., Herschler, T. D. Stopar, D. (2001). Bacteriophage latent-period evolution as a response to resource availability. Appl Environ Microbiol 67, 4233-4241.
3. Abedon, S. T., Hyman, P. Thomas, C. (2003). Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability. Appl Environ Microbiol 69, 7499-7506.
4. Bernhardt, J., Buttner, K., Scharf, C. Hecker, M. (1999). Dual channel imaging of two-dimensional electropherograms in Bacillus subtilis. Electrophoresis 20, 2225-2240.
5. Bode, W. (1967). Lysis inhibition in Escherichia coli infected with bacteriophage T4. J Virol 1, 948-955.
6. Burch, L. H., Zhang, L., Chao, F. G., Xu, H. Drake, J. W. (2011). The bacteriophage T4 rapid-lysis genes and their mutational proclivities. J Bacteriol 193, 3537-3545.
7. Doermann, A. H. (1948). Lysis and lysis inhibition with Escherichia coli bacteriophage. J Bacteriol 55, 257-276.
8. Doermann, A. H. Hill, M. B. (1953). Genetic structure of bacteriophage T4 as described by recombination studies of factors influencing plaque morphology. Genetics 38, 79-90.
9. Edgar, R. S., Feynman, R. P., Klein, S., Lielausis, I. Steinberg, C. M. (1962). Mapping experiments with r mutants of bacteriophage T4D. Genetics 47, 179-186.
10. Golec, P. (2010). The role of RI and RIII proteins in regulation of developmental cycle of bacteriophage T4. PhD thesis. University of Gdansk.
11. Golec, P., Wiczk, A., Majchrzyk, A., Łoś J M., Wȩgrzyn, G. Łoś M. (2010). A role for accessory genes rI.-1 and rI.1 in the regulation of lysis inhibition by bacteriophage T4. Virus Genes 41, 459-468.
12. Golec, P., Wiczk, A., Łoś, J. M., Konopa, G., Wȩgrzyn, G. Łoś M. (2011). Persistence of bacteriophage T4 in a starved Escherichia coli culture: evidence for the presence of phage subpopulations. J Gen Virol 92, 997-1003.
13. Gorg, A., Obermaier, C., Boguth, G. Weiss, W. (1999). Recent developments in two-dimensional gel electrophoresis with immobilized pH gradients: wide pH gradients up to pH 12, longer separation distances and simplified procedures. Electrophoresis 20, 712-717.
14. Hadas, H., Einav, M., Fishov, I. Zaritsky, A. (1997). Bacteriophage T4 development depends on the physiology of its host Escherichia coli. Microbiology 143, 179-185.
15. Hoskisson, P. A. Hobbs, G. (2005). Continuous culture making a comeback? Microbiology 151, 3153-3159.
16. Jensen, K. F. (1993). The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels. J Bacteriol 175, 3401-3407.
17. Kang, D., Gho, Y. S., Suh, M. Kang, C. (2002). Highly sensitive and fast protein detection with Coomassie brilliant blue in sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Bull Korean Chem Soc 23, 1511-1512.
18. Koch, A. L. (1971). The adaptive responses of Escherichia coli to a feast and famine existence. Adv Microb Physiol 6, 147-217.
19. Kutter, E., Kellenberger, E., Carlson, K., Eddy, S., Neitzel, J., Messinger, L., North, J. Guttman, B. (1994). Effects of bacterial growth conditions and physiology on T4 infection. In Molecular Biology of Bacteriophage T4, pp. 406-418. Edited by J. D. Karam. Washington, DC: American Society for Microbiology.
20. Łoś, M. Wȩgrzyn, G. (2012). Pseudolysogeny. Adv Virus Res 82, 339-349.
21. Łoś M, Wȩgrzyn, G. Neubauer, P. (2003). A role for bacteriophage T4 rI gene function in the control of phage development during pseudolysogeny and in slowly growing host cells. Res Microbiol 154, 547-552.
22. Miller, E. S., Kutter, E., Mosig, G., Arisaka, F., Kunisawa, T. Ruger, W. (2003). Bacteriophage T4 genome. Microbiol Mol Biol Rev 67, 86-156.
23. Paddison, P., Abedon, S. T., Dressman, H. K., Gailbreath, K., Tracy, J., Mosser, E., Neitzel, J., Guttman, B. Kutter, E. (1998). The roles of the bacteriophage T4 r genes in lysis inhibition and fine-structure genetics: a new perspective. Genetics 148, 1539-1550.
24. Rabinovitch, A., Hadas, H., Einav, M., Melamed, Z. Zaritsky, A. (1999). Model for bacteriophage T4 development in Escherichia coli. J Bacteriol 181, 1677-1683.
25. Rabinovitch, A., Fishov, I., Hadas, H., Einav, M. Zaritsky, A. (2002). Bacteriophage T4 development in Escherichia coli is growth rate dependent. J Theor Biol 216, 1-4.
26. Ramanculov, E. Young, R. (2001). Functional analysis of the phage T4 holin in a l context. Mol Genet Genomics 265, 345-353.
27. Sambrook, J., Fritsh, E. F. Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
28. Teich, A., Lin, H. Y., Andersson, L., Meyer, S. Neubauer, P. (1998). Amplification of ColE1 related plasmids in recombinant cultures of Escherichia coli after IPTG induction. J Biotechnol 64, 197-210.
29. Thurmer, A., Voigt, B., Angelov, A., Albrecht, D., Hecker, M. Liebl, W. (2011). Proteomic analysis of the extremely thermoacidophilic archaeon Picrophilus torridus at pH and temperature values close to its growth limit. Proteomics 11, 4559-4568.
30. Tran, T. A., Struck, D. K. Young, R. (2005). Periplasmic domains define holin-antiholin interactions in T4 lysis inhibition. J Bacteriol 187, 6631-6640.
31. Tran, T. A., Struck, D. K. Young, R. (2007). The T4 RI antiholin has an N-terminal signal anchor release domain that targets it for degradation by DegP. J Bacteriol 189, 7618-7625.