메뉴 건너뛰기




Volumn 52, Issue 11, 2013, Pages 1990-1997

Base pairing and miscoding properties of 1,N6-ethenoadenine- and 3,N4-ethenocytosine-containing RNA oligonucleotides

Author keywords

[No Author keywords available]

Indexed keywords

BASE PAIRING; BUILDING BLOCKES; CIRCULAR DICHROISM MEASUREMENTS; NATURAL BASIS; OLIGORIBONUCLEOTIDES; PHOSPHORAMIDITES; PRIMER EXTENSION; REVERSE TRANSCRIPTASES;

EID: 84875474767     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi400116y     Document Type: Article
Times cited : (21)

References (39)
  • 1
    • 83855164055 scopus 로고    scopus 로고
    • Cyclooxygenase- and lipoxygenase-mediated DNA damage
    • Speed, N. and Blair, I. A. (2011) Cyclooxygenase- and lipoxygenase-mediated DNA damage Cancer Metastasis Rev. 30, 437-447
    • (2011) Cancer Metastasis Rev. , vol.30 , pp. 437-447
    • Speed, N.1    Blair, I.A.2
  • 2
    • 77956174933 scopus 로고    scopus 로고
    • Accumulation of miscoding etheno-DNA adducts and highly expressed DNA repair during liver fluke-induced cholangiocarcinogenesis in hamsters
    • Dechakhamphu, S., Pinlaor, S., Sitthithaworn, P., Bartsch, H., and Yongvanit, P. (2010) Accumulation of miscoding etheno-DNA adducts and highly expressed DNA repair during liver fluke-induced cholangiocarcinogenesis in hamsters Mutat. Res. 691, 9-16
    • (2010) Mutat. Res. , vol.691 , pp. 9-16
    • Dechakhamphu, S.1    Pinlaor, S.2    Sitthithaworn, P.3    Bartsch, H.4    Yongvanit, P.5
  • 3
    • 38949209776 scopus 로고    scopus 로고
    • Biological Properties of Single Chemical-DNA Adducts: A Twenty Year Perspective
    • Delaney, J. C. and Essigmann, J. M. (2008) Biological Properties of Single Chemical-DNA Adducts: A Twenty Year Perspective Chem. Res. Toxicol. 21, 232-252
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 232-252
    • Delaney, J.C.1    Essigmann, J.M.2
  • 5
    • 47049109950 scopus 로고    scopus 로고
    • DNA Adducts with Lipid Peroxidation Products
    • Blair, I. A. (2008) DNA Adducts with Lipid Peroxidation Products J. Biol. Chem. 283, 15545-15549
    • (2008) J. Biol. Chem. , vol.283 , pp. 15545-15549
    • Blair, I.A.1
  • 6
    • 0038799736 scopus 로고    scopus 로고
    • Oxidative DNA damage: Mechanisms, mutation, and disease
    • Cooke, M. S., Evans, M. D., Dizdaroglu, M., and Lunec, J. (2003) Oxidative DNA damage: Mechanisms, mutation, and disease FASEB J. 17, 1195-1214
    • (2003) FASEB J. , vol.17 , pp. 1195-1214
    • Cooke, M.S.1    Evans, M.D.2    Dizdaroglu, M.3    Lunec, J.4
  • 8
    • 0025058642 scopus 로고
    • Mechanisms of Mutagenesis by the Vinyl Chloride Metabolite Chloroacetaldehyde. Effect of Gene-Targeted in Vitro Adduction of M 13 DNA on DNA Template Activity in Vivo and in Vitro
    • Jacobsen, J. S. and Humayun, M. Z. (1990) Mechanisms of Mutagenesis by the Vinyl Chloride Metabolite Chloroacetaldehyde. Effect of Gene-Targeted in Vitro Adduction of M 13 DNA on DNA Template Activity in Vivo and in Vitro Biochemistry 29, 496-504
    • (1990) Biochemistry , vol.29 , pp. 496-504
    • Jacobsen, J.S.1    Humayun, M.Z.2
  • 9
    • 0020491921 scopus 로고
    • Chloroacetaldehyde-Treated Ribo- and Deoxyribopolynucleotides. 1. Reaction Products
    • Kusmierek, J. T. and Singer, B. (1982) Chloroacetaldehyde-Treated Ribo- and Deoxyribopolynucleotides. 1. Reaction Products Biochemistry 21, 5717-5722
    • (1982) Biochemistry , vol.21 , pp. 5717-5722
    • Kusmierek, J.T.1    Singer, B.2
  • 11
    • 0015504246 scopus 로고
    • Fluorescent Modification of Adenosine-Containing Coenzymes. Biological Activities and Spectroscopic Properties
    • Secrist, J. A., Barrio, J. R., Leonard, N. J., and Weber, G. (1972) Fluorescent Modification of Adenosine-Containing Coenzymes. Biological Activities and Spectroscopic Properties Biochemistry 11, 3499-3506
    • (1972) Biochemistry , vol.11 , pp. 3499-3506
    • Secrist, J.A.1    Barrio, J.R.2    Leonard, N.J.3    Weber, G.4
  • 14
    • 0029824077 scopus 로고    scopus 로고
    • Lipid peroxidation as a potential endogenous source for the formation of exocyclic DNA adducts
    • Chung, F. L., Chen, H. J. C., and Nath, R. G. (1996) Lipid peroxidation as a potential endogenous source for the formation of exocyclic DNA adducts Carcinogenesis 17, 2105-2111
    • (1996) Carcinogenesis , vol.17 , pp. 2105-2111
    • Chung, F.L.1    Chen, H.J.C.2    Nath, R.G.3
  • 19
    • 0029665327 scopus 로고    scopus 로고
    • 6-Ethenodeoxyadenosine, a DNA Adduct Highly Mutagenic in Mammalian Cells
    • 6-Ethenodeoxyadenosine, a DNA Adduct Highly Mutagenic in Mammalian Cells Biochemistry 35, 11487-11492
    • (1996) Biochemistry , vol.35 , pp. 11487-11492
    • Pandya, G.A.1    Moriya, M.2
  • 22
    • 0027973376 scopus 로고
    • Mutagenic potency of exocyclic DNA adducts: Marked differences between Escherichia coli and simian kidney cells
    • Moriya, M., Zhang, W., Johnson, F., and Grollman, A. P. (1994) Mutagenic potency of exocyclic DNA adducts: Marked differences between Escherichia coli and simian kidney cells Proc. Natl. Acad. Sci. U.S.A. 91, 11899-11903
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 11899-11903
    • Moriya, M.1    Zhang, W.2    Johnson, F.3    Grollman, A.P.4
  • 23
    • 0344154306 scopus 로고    scopus 로고
    • Enzymology of repair of etheno-adducts
    • Gros, L., Ishchenko, A. A., and Saparbaev, M. (2003) Enzymology of repair of etheno-adducts Mutat. Res. 531, 219-229
    • (2003) Mutat. Res. , vol.531 , pp. 219-229
    • Gros, L.1    Ishchenko, A.A.2    Saparbaev, M.3
  • 24
    • 68349148713 scopus 로고    scopus 로고
    • Synthesis and base pairing properties of DNA-RNA heteroduplex containing 5-hydroxyuridine
    • Cui, S., Kim, Y.-H., Jin, C.-H., Kim, S. K., Rhee, M.-h., Kwon, O.-S., and Moon, B. J. (2009) Synthesis and base pairing properties of DNA-RNA heteroduplex containing 5-hydroxyuridine BMB Rep. 42, 373-379
    • (2009) BMB Rep. , vol.42 , pp. 373-379
    • Cui, S.1    Kim, Y.-H.2    Jin, C.-H.3    Kim, S.K.4    Rhee, M.-H.5    Kwon, O.-S.6    Moon, B.J.7
  • 25
    • 0037026182 scopus 로고    scopus 로고
    • Base pairing properties of 8-oxo-7,8-dihydroadenosine in cDNA synthesis by reverse transcriptases
    • Kim, S. K., Kim, J. Y., Baek, A. K., and Moon, B. J. (2002) Base pairing properties of 8-oxo-7,8-dihydroadenosine in cDNA synthesis by reverse transcriptases Bioorg. Med. Chem. Lett. 12, 1977-1980
    • (2002) Bioorg. Med. Chem. Lett. , vol.12 , pp. 1977-1980
    • Kim, S.K.1    Kim, J.Y.2    Baek, A.K.3    Moon, B.J.4
  • 26
    • 13544271914 scopus 로고    scopus 로고
    • DNA·RNA heteroduplex containing 8-oxo-7,8-dihydroguanosine: Base pairing, structures, and thermodynamic stability
    • Kim, S. K., Lee, S. H., Kwon, O.-S., and Moon, B. J. (2004) DNA·RNA heteroduplex containing 8-oxo-7,8-dihydroguanosine: Base pairing, structures, and thermodynamic stability J. Biochem. Mol. Biol. 37, 657-662
    • (2004) J. Biochem. Mol. Biol. , vol.37 , pp. 657-662
    • Kim, S.K.1    Lee, S.H.2    Kwon, O.-S.3    Moon, B.J.4
  • 27
    • 82255181423 scopus 로고    scopus 로고
    • Synthesis, base pairing properties and trans-lesion synthesis by reverse transcriptases of oligoribonucleotides containing the oxidatively damaged base 5-hydroxycytidine
    • Küpfer, P. A. and Leumann, C. J. (2011) Synthesis, base pairing properties and trans-lesion synthesis by reverse transcriptases of oligoribonucleotides containing the oxidatively damaged base 5-hydroxycytidine Nucleic Acids Res. 39, 9422-9432
    • (2011) Nucleic Acids Res. , vol.39 , pp. 9422-9432
    • Küpfer, P.A.1    Leumann, C.J.2
  • 28
    • 34548476954 scopus 로고    scopus 로고
    • Messenger RNA oxidation is an early event preceding cell death and causes reduced protein expression
    • Shan, X., Chang, Y., and Lin, C. L. (2007) Messenger RNA oxidation is an early event preceding cell death and causes reduced protein expression FASEB J. 21, 2753-2764
    • (2007) FASEB J. , vol.21 , pp. 2753-2764
    • Shan, X.1    Chang, Y.2    Lin, C.L.3
  • 30
    • 0028176309 scopus 로고
    • 4-etheno deoxy and ribo cytidine phosphoramidites. Strongly fluorescent structures for selective introduction in defined sequence DNA and RNA molecules
    • 4-etheno deoxy and ribo cytidine phosphoramidites. Strongly fluorescent structures for selective introduction in defined sequence DNA and RNA molecules Nucleic Acids Res. 22, 1296-1304
    • (1994) Nucleic Acids Res. , vol.22 , pp. 1296-1304
    • Srivastava, S.C.1    Raza, S.K.2    Misra, R.3
  • 34
    • 36749047363 scopus 로고    scopus 로고
    • Trans-lesion synthesis and RNaseH activity by reverse transcriptases on a true abasic RNA template
    • Küpfer, P. A., Crey-Desbiolles, C., and Leumann, C. J. (2007) Trans-lesion synthesis and RNaseH activity by reverse transcriptases on a true abasic RNA template Nucleic Acids Res. 35, 6486-6853
    • (2007) Nucleic Acids Res. , vol.35 , pp. 6486-6853
    • Küpfer, P.A.1    Crey-Desbiolles, C.2    Leumann, C.J.3
  • 35
    • 33947210076 scopus 로고    scopus 로고
    • 6-Etheno-2′-deoxytubercidin and pyrrolo-C: Synthesis, base pairing, and fluorescence properties of 7-deazapurine nucleosides and oligonucleotides
    • 6-Etheno-2′-deoxytubercidin and pyrrolo-C: Synthesis, base pairing, and fluorescence properties of 7-deazapurine nucleosides and oligonucleotides Tetrahedron 63, 3471-3482
    • (2007) Tetrahedron , vol.63 , pp. 3471-3482
    • Seela, F.1    Schweinberger, E.2    Xu, K.3    Sirivolu, V.R.4    Rosemeyera, H.5    Beckera, E.-M.6
  • 36
    • 0032497410 scopus 로고    scopus 로고
    • The impact of an Exocyclic Cytosine Adduct on a DNA Duplex Properties: Significant Thermodynamic Consequences Despite Modest Lesion-Induced Structural Alterations
    • Gelfand, C. A., Plum, G. E., Grollman, A. P., Johnson, F., and Breslauer, K. J. (1998) The impact of an Exocyclic Cytosine Adduct on a DNA Duplex Properties: Significant Thermodynamic Consequences Despite Modest Lesion-Induced Structural Alterations Biochemistry 37, 12507-12512
    • (1998) Biochemistry , vol.37 , pp. 12507-12512
    • Gelfand, C.A.1    Plum, G.E.2    Grollman, A.P.3    Johnson, F.4    Breslauer, K.J.5
  • 37
    • 0023648312 scopus 로고
    • Deoxyhexanucleotide Containing a Vinyl Chloride Induced DNA Lesion, 1,N6-Ethenoadenine: Synthesis, Physical Characterization, and Incorporation into a Duplex Bacteriophage M13 Genome as Part of an Amber Codon
    • Basu, A. K., Niedernhofer, L. J., and Essigmann, J. M. (1987) Deoxyhexanucleotide Containing a Vinyl Chloride Induced DNA Lesion, 1,N6-Ethenoadenine: Synthesis, Physical Characterization, and Incorporation into a Duplex Bacteriophage M13 Genome as Part of an Amber Codon Biochemistry 26, 5626-5635
    • (1987) Biochemistry , vol.26 , pp. 5626-5635
    • Basu, A.K.1    Niedernhofer, L.J.2    Essigmann, J.M.3
  • 38
    • 0031431889 scopus 로고    scopus 로고
    • 6-ethenodeoxyadenosine (εA): Formation of εa basepairs and elongation in defined templates
    • 6-ethenodeoxyadenosine (εA): Formation of εA basepairs and elongation in defined templates Carcinogenesis 18, 1609-1615
    • (1997) Carcinogenesis , vol.18 , pp. 1609-1615
    • Litinski, V.1    Chenna, A.2    Sagi, J.3    Singer, B.4
  • 39
    • 0037065724 scopus 로고    scopus 로고
    • 4-etheno-C, a Potential Carcinogenic Glycidaldehyde Product, Miscodes in Vitro Using Mammalian DNA Polymerases
    • 4-etheno-C, a Potential Carcinogenic Glycidaldehyde Product, Miscodes In Vitro Using Mammalian DNA Polymerases Biochemistry 41, 1778-1785
    • (2002) Biochemistry , vol.41 , pp. 1778-1785
    • Singer, B.1    Medina, M.2    Zhang, Y.3    Wang, Z.4    Guliaev, A.B.5    Hang, B.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.