Molars and incisors: Show your microarray IDs

BMC Research Notes

Volumn 6, Issue 1, 2013, Pages

  Laugel Haushalter, Virginie ^a   Paschaki, Marie ^a   Thibault Carpentier, Christelle ^a   Dembelé, Doulaye ^a   Dollé, Pascal ^a   Bloch Zupan, Agnès ^a,b  

^a UNIVERSITÉ DE STRASBOURG   (France)

^b UNIVERSITY HOSPITAL OF STRASBOURG   (France)

Author keywords

Gene expression; Incisor; Microarray; Molar; Mouse; Tooth development

Indexed keywords

ANIMALIA; ERINACEIDAE; MURINAE;

ARTICLE; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENE REGULATORY NETWORK; GENETIC TRANSCRIPTION; HUMAN; INCISOR; METABOLISM; MOLAR TOOTH; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

GENE EXPRESSION PROFILING; GENE REGULATORY NETWORKS; HUMANS; INCISOR; MOLAR; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; TRANSCRIPTION, GENETIC;

EID: 84875334807     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-6-113     Document Type: Article

References (81)

1. Localization of putative stem cells in dental epithelium and their association with Notch and FGF signaling. Harada H, Kettunen P, Jung HS, Mustonen T, Wang YA, Thesleff I, J Cell Biol 1999 147 1 105 120 (Pubitemid 30211800)
2. Observations on continuously growing roots of the sloth and the K14-Eda transgenic mice indicate that epithelial stem cells can give rise to both the ameloblast and root epithelium cell lineage creating distinct tooth patterns. Tummers M, Thesleff I, Evol Dev 2008 10 2 187 195 (Pubitemid 351341479)
3. Neural crest cells and patterning of the mammalian dentition. Cobourne MT, Mitsiadis T, J Exp Zoolog B Mol Dev Evol 2006 306 3 251 260 (Pubitemid 43989079)
4. Cranial neural crest and development of the head skeleton. Knight RD, Schilling TF, Adv Exp Med Biol 2006 589 120 133
5. Neural crest cells and the community of plan for craniofacial development: historical debates and current perspectives. Noden DM, Schneider RA, Adv Exp Med Biol 2006 589 1 23
6. Where and how to make them. Peters H, Balling R T, Trends Genet 1999 15 2 59 65
7. Epithelial-mesenchymal signalling regulating tooth morphogenesis. Thesleff I, J Cell Sci 2003 116 9 1647 1648 (Pubitemid 36582151)
8. Molecular regulation of tooth development. Thesleff I, Aberg T, Bone 1999 25 1 123 125 (Pubitemid 29322075)
9. Molecular genetics of tooth morphogenesis and patterning: the right shape in the right place. Tucker AS, Sharpe PT, J Dent Res 1999 78 4 826 834 (Pubitemid 32489301)
10. Sonic hedgehog signaling and the developing tooth. Cobourne MT, Sharpe PT, Curr Top Dev Biol 2005 65 255 287
11. Sonic hedgehog regulates growth and morphogenesis of the tooth. Dassule HR, Lewis P, Bei M, Maas R, McMahon AP, Development 2000 127 22 4775 4785
12. The Shh signalling pathway in early tooth development. Hardcastle Z, Hui CC, Sharpe PT, Cell Mol Biol (Noisy-le-Grand) 1999 45 5 567 578
13. BMP signalling in craniofacial development. Nie X, Luukko K, Kettunen P, Int J Dev Biol 2006 50 6 511 521 (Pubitemid 44114037)
14. FGF signalling in craniofacial development and developmental disorders. Nie X, Luukko K, Kettunen P, Oral Dis 2006 12 2 102 111
15. Ectodysplasin, Edar and TNFRSF19 are expressed in complementary and overlapping patterns during mouse embryogenesis. Pispa J, Mikkola ML, Mustonen T, Thesleff I, Gene Expr Patterns 2003 3 5 675 679 (Pubitemid 37074925)
16. The importance of signal pathway modulation in all aspects of tooth development. Tummers M, Thesleff I, J Exp Zoolog B Mol Dev Evol 2009 312B 4 309 319
17. Role of Dlx-1 and Dlx-2 genes in patterning of the murine dentition. Thomas BL, Tucker AS, Qui M, Ferguson CA, Hardcastle Z, Rubenstein JL, Sharpe PT, Development 1997 124 23 4811 4818 (Pubitemid 28014384)
18. Interactions between Bmp-4 and Msx-1 act to restrict gene expression to odontogenic mesenchyme. Tucker AS, Al Khamis A, Sharpe PT, Dev Dyn 1998 212 4 533 539 (Pubitemid 28355497)
19. Deletion of the Pitx1 genomic locus affects mandibular tooth morphogenesis and expression of the Barx1 and Tbx1 genes. Mitsiadis TA, Drouin J, Dev Biol 2008 313 2 887 896
20. Mouse Otlx2/RIEG expression in the odontogenic epithelium precedes tooth initiation and requires mesenchyme-derived signals for its maintenance. Mucchielli ML, Mitsiadis TA, Raffo S, Brunet JF, Proust JP, Goridis C, Dev Biol 1997 189 2 275 284 (Pubitemid 27428369)
21. Function of Rieger syndrome gene in left-right asymmetry and craniofacial development. Lu MF, Pressman C, Dyer R, Johnson RL, Martin JF, Nature 1999 401 6750 276 278
22. Effects of retinoids on tooth morphogenesis and cytodifferentiations, in vitro. Mark MP, Bloch-Zupan A, Ruch JV, Int J Dev Biol 1992 36 4 517 526 (Pubitemid 23051873)
23. Reiterative signaling and patterning during mammalian tooth morphogenesis. Jernvall J, Thesleff I, Mech Dev 2000 92 1 19 29 (Pubitemid 30125959)
24. Fgf-8 determines rostral-caudal polarity in the first branchial arch. Tucker AS, Yamada G, Grigoriou M, Pachnis V, Sharpe PT, Development 1999 126 1 51 61 (Pubitemid 29045899)
25. Expression and regulation of the Msx1 natural antisense transcript during development. Coudert AE, Pibouin L, Vi-Fane B, Thomas BL, Macdougall M, Choudhury A, Robert B, Sharpe PT, Berdal A, Lezot F, Nucleic Acids Res 2005 33 16 5208 5218 (Pubitemid 41508681)
26. Tooth development is independent of a Hox patterning programme. James CT, Ohazama A, Tucker AS, Sharpe PT, Dev Dyn 2002 225 3 332 335 (Pubitemid 35265810)
27. Identification of novel transcription-regulating genes expressed during murine molar development. Uchibe K, Shimizu H, Yokoyama S, Kuboki T, Asahara H, Dev Dyn 2012 241 7 1217 1226
28. Hand transcription factors cooperatively regulate development of the distal midline mesenchyme. Barbosa AC, Funato N, Chapman S, McKee MD, Richardson JA, Olson EN, Yanagisawa H, Dev Biol 2007 310 1 154 168 (Pubitemid 47445496)
29. Role of Islet1 in the patterning of murine dentition. Mitsiadis TA, Angeli I, James C, Lendahl U, Sharpe PT, Development 2003 130 18 4451 4460 (Pubitemid 37185332)
30. The enamel knot: a putative signaling center regulating tooth development. Thesleff I, Jernvall J, Cold Spring Harb Symp Quant Biol 1997 62 257 267 (Pubitemid 28198544)
31. The influence of the dental papilla on the development of tooth shape in embryonic mouse tooth germs. Kollar EJ, Baird GR, J Embryol Exp Morphol 1969 21 1 131 148
32. Tissue interactions in embryonic mouse tooth germs. II. The inductive role of the dental papilla. Kollar EJ, Baird GR, J Embryol Exp Morphol 1970 24 1 173 186
33. Current knowledge of tooth development: patterning and mineralization of the murine dentition. Caton J, Tucker AS, J Anat 2009 214 4 502 515
34. Mouse models of tooth abnormalities. Fleischmannova J, Matalova E, Tucker AS, Sharpe PT, Eur J Oral Sci 2008 116 1 1 10
35. Bloch-Zupan A, Sedano H, Scully C, Dento/Oro/Craniofacial Anomalies and Genetics London: Elsevier Inc 1 2012
36. Hennekam JRCM, Krantz I, Allanson J, Gorlin's Syndromes of the Head and Neck USA: Oxford University Press 5 2010
37. SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma. Gregory-Evans CY, Moosajee M, Hodges MD, Mackay DS, Game L, Vargesson N, Bloch-Zupan A, Ruschendorf F, Santos-Pinto L, Wackens G, Hum Mol Genet 2007 16 20 3482 3493
38. Mutations in ANKRD11 Cause KBG Syndrome, Characterized by Intellectual Disability, Skeletal Malformations, and Macrodontia. Sirmaci A, Spiliopoulos M, Brancati F, Powell E, Duman D, Abrams A, Bademci G, Agolini E, Guo S, Konuk B, Am J Hum Genet 2011 89 2 289 294
39. Small deletions of SATB2 cause some of the clinical features of the 2q33.1 microdeletion syndrome. Rosenfeld JA, Ballif BC, Lucas A, Spence EJ, Powell C, Aylsworth AS, Torchia BA, Shaffer LG, PLoS One 2009 4 8 6568
40. Satb2 haploinsufficiency phenocopies 2q32-q33 deletions, whereas loss suggests a fundamental role in the coordination of jaw development. Britanova O, Depew MJ, Schwark M, Thomas BL, Miletich I, Sharpe P, Tarabykin V, Am J Hum Genet 2006 79 4 668 678 (Pubitemid 44452744)
41. Homozygosity mapping and candidate prioritization identify mutations, missed by whole-exome sequencing, in SMOC2, causing major dental developmental defects. Bloch-Zupan A, Jamet X, Etard C, Laugel V, Muller J, Geoffroy V, Strauss JP, Pelletier V, Marion V, Poch O, Am J Hum Genet 2011 89 6 773 781
42. Barx1, a new mouse homeodomain transcription factor expressed in cranio-facial ectomesenchyme and the stomach. Tissier-Seta JP, Mucchielli ML, Mark M, Mattei MG, Goridis C, Brunet JF, Mech Dev 1995 51 1 3 15
43. Dynamic expression of Six family genes in the dental mesenchyme and the epithelial ameloblast stem/progenitor cells during murine tooth development. Nonomura K, Takahashi M, Wakamatsu Y, Takano-Yamamoto T, Osumi N, J Anat 2010 216 1 80 91
44. Tooth-type specific expression of dHAND/Hand2: possible involvement in murine lower incisor morphogenesis. Abe M, Tamamura Y, Yamagishi H, Maeda T, Kato J, Tabata MJ, Srivastava D, Wakisaka S, Kurisu K, Cell Tissue Res 2002 310 2 201 212 (Pubitemid 36015571)
45. A 223-kb de novo deletion of PAX9 in a patient with oligodontia. Haldeman-Englert CR, Biser A, Zackai EH, Ming JE, J Craniofac Surg 2010 21 3 837 839
46. Expression and regulation of Lhx6 and Lhx7, a novel subfamily of LIM homeodomain encoding genes, suggests a role in mammalian head development. Grigoriou M, Tucker AS, Sharpe PT, Pachnis V, Development 1998 125 11 2063 2074 (Pubitemid 28297793)
47. SMAD4-mediated WNT signaling controls the fate of cranial neural crest cells during tooth morphogenesis. Li J, Huang X, Xu X, Mayo J, Bringas P Jr, Jiang R, Wang S, Chai Y, Development 2011 138 10 1977 1989
48. Expression survey of genes critical for tooth development in the human embryonic tooth germ. Lin D, Huang Y, He F, Gu S, Zhang G, Chen Y, Zhang Y, Dev Dyn 2007 236 5 1307 1312 (Pubitemid 46750262)
49. Developmentally regulated expression of intracellular Fgf11-13, hormone-like Fgf15 and canonical Fgf16, -17 and -20 mRNAs in the developing mouse molar tooth. Kettunen P, Furmanek T, Chaulagain R, Kvinnsland IH, Luukko K, Acta Odontol Scand 2011 69 6 360 366
50. Regionalized expression of the Dbx family homeobox genes in the embryonic CNS of the mouse. Shoji H, Ito T, Wakamatsu Y, Hayasaka N, Ohsaki K, Oyanagi M, Kominami R, Kondoh H, Takahashi N, Mech Dev 1996 56 1-2 25 39 (Pubitemid 26182618)
51. Expression and role of Lhx8 in murine tooth development. Shibaguchi T, Kato J, Abe M, Tamamura Y, Tabata MJ, Liu JG, Iwamoto M, Wakisaka S, Wanaka A, Kurisu K, Arch Histol Cytol 2003 66 1 95 108 (Pubitemid 36504419)
52. Expression patterns of BMPRs in the developing mouse molar. Nadiri A, Kuchler-Bopp S, Perrin-Schmitt F, Lesot H, Cell Tissue Res 2006 324 1 33 40
53. ERK activation is involved in tooth development via FGF10 signaling. Cho KW, Cai J, Kim HY, Hosoya A, Ohshima H, Choi KY, Jung HS, J Exp Zool B Mol Dev Evol 2009 312 8 901 911
54. Restriction of sonic hedgehog signalling during early tooth development. Cobourne MT, Miletich I, Sharpe PT, Development 2004 131 12 2875 2885 (Pubitemid 38997276)
55. Transforming growth factor-beta superfamily members expressed in rat incisor pulp. Nakashima M, Toyono T, Murakami T, Akamine A, Arch Oral Biol 1998 43 9 745 751 (Pubitemid 28427632)
56. Aquaporin expression in developing human teeth and selected orofacial tissues. Wang W, Hart PS, Piesco NP, Lu X, Gorry MC, Hart TC, Calcif Tissue Int 2003 72 3 222 227 (Pubitemid 36919527)
57. Amelotin-a Novel Secreted, Ameloblast-specific Protein. Iwasaki K, Bajenova E, Somogyi-Ganss E, Miller M, Nguyen V, Nourkeyhani H, Gao Y, Wendel M, Ganss B, J Dent Res 2005 84 12 1127 1132 (Pubitemid 43827779)
58. Protogenin, a new member of the immunoglobulin superfamily, is implicated in the development of the mouse lower first molar. Takahashi KF, Kiyoshima T, Kobayashi I, Xie M, Yamaza H, Fujiwara H, Ookuma Y, Nagata K, Wada H, Sakai T, BMC Dev Biol 2010 10 115
59. Slitrk6 expression profile in the mouse embryo and its relationship to that of Nlrr3. Aruga J, Gene Expr Patterns 2003 3 6 727 733 (Pubitemid 37451854)
60. Differential Shh, Bmp and Wnt gene expressions during craniofacial development in mice. Paiva KB, Silva-Valenzuela M, Massironi SM, Ko GM, Siqueira FM, Nunes FD, Acta Histochem 2010 112 5 508 517
61. Protein kinase C betaII and delta/theta play critical roles in bone morphogenic protein-4-stimulated osteoblastic differentiation of MC3T3-E1 cells. Park KH, Han DI, Rhee YH, Jeong SJ, Kim SH, Park YG, Biochem Biophys Res Commun 2010 403 1 7 12
62. Characterization and developmental expression of Tlx-1, the murine homolog of HOX11. Raju K, Tang S, Dube ID, Kamel-Reid S, Bryce DM, Breitman ML, Mech Dev 1993 44 1 51 64 (Pubitemid 24037698)
63. Cyp26C1 encodes a novel retinoic acid-metabolizing enzyme expressed in the hindbrain, inner ear, first branchial arch and tooth buds during murine development. Tahayato A, Dolle P, Petkovich M, Gene Expr Patterns 2003 3 4 449 454 (Pubitemid 36950419)
64. Effect of neurotrophins on differentiation, calcification and proliferation in cultures of human pulp cells. Mizuno N, Shiba H, Xu WP, Inui T, Fujita T, Kajiya M, Takeda K, Hasegawa N, Kawaguchi H, Kurihara H, Cell Biol Int 2007 31 12 1462 1469 (Pubitemid 47599976)
65. Regulation of SFRP-1 expression in the rat dental follicle. Liu D, Yao S, Wise GE, Connect Tissue Res 2012 53 5 366 372
66. A DNA microarray analysis of chemokine and receptor genes in the rat dental follicle-role of secreted frizzled-related protein-1 in osteoclastogenesis. Liu D, Wise GE, Bone 2007 41 2 266 272 (Pubitemid 47001814)
67. The genetic control of early tooth development. Maas R, Bei M, Crit Rev Oral Biol Med 1997 8 1 4 39 (Pubitemid 27132230)
68. Disruption of ALX1 causes extreme microphthalmia and severe facial clefting: expanding the spectrum of autosomal-recessive ALX-related frontonasal dysplasia. Uz E, Alanay Y, Aktas D, Vargel I, Gucer S, Tuncbilek G, von Eggeling F, Yilmaz E, Deren O, Posorski N, Am J Hum Genet 2010 86 5 789 796
69. NK-2 class homeobox genes and pharyngeal/oral patterning: Nkx2-3 is required for salivary gland and tooth morphogenesis. Biben C, Wang CC, Harvey RP, Int J Dev Biol 2002 46 4 415 422 (Pubitemid 36841008)
70. Physiological implications of DLX homeoproteins in enamel formation. Lezot F, Thomas B, Greene SR, Hotton D, Yuan ZA, Castaneda B, Bolanos A, Depew M, Sharpe P, Gibson CW, J Cell Physiol 2008 216 3 688 697
71. Tooth and jaw: molecular mechanisms of patterning in the first branchial arch. Cobourne MT, Sharpe PT, Arch Oral Biol 2003 48 1 1 14 (Pubitemid 36453323)
72. barx1 is necessary for ectomesenchyme proliferation and osteochondroprogenitor condensation in the zebrafish pharyngeal arches. Sperber SM, Dawid IB, Dev Biol 2008 321 1 101 110
73. The Shh signalling pathway in tooth development: defects in Gli2 and Gli3 mutants. Hardcastle Z, Mo R, Hui CC, Sharpe PT, Development 1998 125 15 2803 2811 (Pubitemid 28410205)
74. The LIM homeodomain transcription factors Lhx6 and Lhx7 are key regulators of mammalian dentition. Denaxa M, Sharpe PT, Pachnis V, Dev Biol 2009 333 2 324 336
75. The cutting-edge of mammalian development; how the embryo makes teeth. Tucker A, Sharpe P, Nat Rev Genet 2004 5 7 499 508 (Pubitemid 38868506)
76. Expression of nuclear retinoic acid receptors during mouse odontogenesis. Bloch-Zupan A, Decimo D, Loriot M, Mark MP, Ruch JV, Differentiation 1994 57 3 195 203 (Pubitemid 24296446)
77. In vitro effects of retinoic acid on mouse incisor development. Bloch-Zupan A, Mark MP, Weber B, Ruch JV, Arch Oral Biol 1994 39 10 891 900
78. Modulation of Fgf3 dosage in mouse and men mirrors evolution of mammalian dentition. Charles C, Lazzari V, Tafforeau P, Schimmang T, Tekin M, Klein O, Viriot L, Proc Natl Acad Sci U S A 2009 106 52 22364 22368
79. Double dens invaginatus of molarized maxillary central incisors, premolarization of maxillary lateral incisors, multituberculism of the mandibular incisors, canines and first premolar, and sensorineural hearing loss. Kantaputra PN, Gorlin RJ, Clin Dysmorphol 1992 1 3 128 136
80. Regulation of tooth number by fine-tuning levels of receptor-tyrosine kinase signaling. Charles C, Hovorakova M, Ahn Y, Lyons DB, Marangoni P, Churava S, Biehs B, Jheon A, Lesot H, Balooch G, Development 2011 138 18 4063 4073
81. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Edgar R, Domrachev M, Lash AE, Nucleic Acids Res 2002 30 1 207 210 (Pubitemid 34679544)