DNA sequence detection based on raman spectroscopy using single walled carbon nanotube

Journal of Bioscience and Bioengineering

Volumn 115, Issue 4, 2013, Pages 438-441

  Bansal, Jyoti ^a   Singh, Inderpreet ^a   Bhatnagar, Pramod Kumar ^a   Mathur, Parmatma Chandra ^a  

^a UNIVERSITY OF DELHI   (India)

Author keywords

Complementary DNA; Gel electrophoresis; Noncomplementary DNA; Probic DNA; Raman spectrum; Single walled carbon nanotube

Indexed keywords

BACILLUS ANTHRACIS; EXCITATION BEAMS; GEL ELECTROPHORESIS; PEAK INTENSITY; SENSING ABILITIES; SEQUENCE DETECTION; SINGLE-WALLED CARBON NANOTUBE (SWNTS); SURFACE AREA;

BIOSENSORS; CARBON NANOTUBES; DNA; ELECTROPHORESIS; RAMAN SCATTERING; RAMAN SPECTROSCOPY; SINGLE-WALLED CARBON NANOTUBES (SWCN);

DNA SEQUENCES;

BACTERIAL DNA; SINGLE WALLED NANOTUBE; CARBON NANOTUBE; SINGLE STRANDED DNA;

ARTICLE; BACILLUS ANTHRACIS; COMPLEX FORMATION; DNA BINDING; DNA HYBRIDIZATION; DNA SEQUENCE; NONHUMAN; RAMAN SPECTROMETRY; SENSOR; SEQUENCE ANALYSIS; SURFACE PROPERTY; CHEMISTRY; GENETIC PROCEDURES; GENETICS; ISOLATION AND PURIFICATION; NUCLEIC ACID HYBRIDIZATION; PROCEDURES;

BACILLUS ANTHRACIS; BACTERIA (MICROORGANISMS);

BACILLUS ANTHRACIS; BIOSENSING TECHNIQUES; DNA, BACTERIAL; DNA, SINGLE-STRANDED; NANOTUBES, CARBON; NUCLEIC ACID HYBRIDIZATION; SEQUENCE ANALYSIS, DNA; SPECTRUM ANALYSIS, RAMAN;

EID: 84875241703     PISSN: 13891723     EISSN: 13474421     Source Type: Journal    
DOI: 10.1016/j.jbiosc.2012.11.002     Document Type: Article

References (17)

1. Alexandre A.V., Srinivasan S., Ivan Vetcher A., Semen M.A., Mikhail K., Ray H.B., Stephen D.L. Fractionation of SWNT/nucleic acid complexes by agarose gel electrophoresis. J. Nanotechnol. 2006, 17:4263-4269.
2. Li Yulin, Xiaogang H., Zhaoxiang D., Angew Grafting single-walled carbon nanotubes with highly hybridizable DNA sequences: potential building blocks for DNA-programmed material assembly. Chem. Int. Ed. 2007, 46:7481-7484.
3. Ronghua Y., Jianyu J., Yan C., Na S., Huaizhi K., Zeyu X., Zhiwen T., Wu Yanrong, Zhi Z., Weihong T. Carbon nanotube-quenched fluorescent oligonucleotides: probes that fluoresce upon hybridization. J. Am. Chem. Soc. 2008, 130:8351-8358.
4. Woolley Adam T., Guillemette Chantal, Chin L.C., David E.H., Charles M.L. Direct haplotyping of kilobase-size DNA using carbon nanotube probes. Nat. Biotechnol. 2000, 18:760-763.
5. Mathur N., Aneja A., Bhatnagar P.K., Mathur P.C. A new FRET-based sensitive DNA sensor for medical diagnostics using PNA probe and water-soluble blue light emitting polymer. J. Sens., 2008 2008, 270475.
6. Neil S.L., Lynn R.J., Laura J.T., Frances W. Monoclonal versus polyclonal antibodies: distinguishing characteristics, applications, and information resources. ILAR J. 2005, 46:258-268.
7. Soledad Belluzo M., élida Ribone M., Claudia Marina L. Assembling amperometric biosensors for clinical diagnostics. Sensors 2008, 8:1366-1399.
8. Jun Li., Hou Tee Ng., Cassell A., Wendy F., Hua C., Ye Qi, Jessica K., Jie H., Meyyappan M. Carbon nanotube nanoelectrode array for ultrasensitive DNA detection. Nano Lett. 2003, 3:597-602.
9. Aneja A., Mathur N., Bhatnagar P.K., Mathur P.C. Triple-fret technique for energy transfer between conjugated polymer and TAMRA dye with possible applications in medical diagnostics. J. Biol. Phys. 2008, 34:487-493.
10. Zheng M., Jagota A., Strano M.S., Santos A.P., Barone P., Chou G., Diner B.A., Dresselhaus M.S., Mclean R.S., Onoa G.B., other 4 authors Structure-based carbon nanotube sorting by sequence-dependent DNA assembly. Science 2003, 302:1545-1548.
11. Costa S., Borowiak-Palen E., Kruszynska M., Bachmatiuk A., Kalenczuk R.J. Characterization of carbon nanotubes by Raman spectroscopy. Mater. Sci. Pol. 2008, 26:433-441.
12. Fantini C., Jorio A., Souza M., Strano M.S., Dresselhaus M.S., Pimenta M.A. Optical transition energies for carbon nanotubes from resonant Raman spectroscopy: environment and temperature effects. Phys. Rev. Lett. 2004, 93:147406.
13. Souza Filho A.G., Chou S.G., Samsonidze Ge G., Dresselhaus G., Dresselhaus M.S., An Lei, Liu J., Swan Anna K., ünlü M.S., Goldberg B.B. Stokes and anti-stokes Raman spectra of small-diameter isolated carbon nanotubes. Phys. Rev. B 2004, 69:115428.
14. Eklund P.C., Holden J.M., Jishi R.A. Vibrational modes of carbon nanotubes; spectroscopy and theory. Carbon 1995, 33:959-972.
15. Hwang E.S., Cao C., Hong S., Jung H.J., Cha C.Y., Choi J., Kim Y., Baik S. The DNA hybridization assay using single-walled carbon nanotubes as ultrasensitive, long-term optical labels. Nanotechnol. 2006, 17:3442-3445.
16. Chou S.G., Rebeiro H.B., Barros E.B., Santos A.P., Nezich D., Samsonidze Ge G., Fantini C., Pimenta M.A., Jorio A., Plentz Filho F., other 9 authors Optical characterization of DNA-wrapped carbon nanotube hybrids. Chem. Phys. Lett. 2004, 397:296-301.
17. Star A., Eugene T., Niemann J., Gabriel Jean-Christophe P., Joiner C.S., Valcke C. Label-free detection of DNA hybridization using carbon nanotube network field-effect transistors. Proc. Natl. Acad. Sci. USA 2006, 103:921-926.