메뉴 건너뛰기




Volumn 587, Issue 7, 2013, Pages 887-891

Contiguous RNA editing sites in the mitochondrial nad1 transcript of Arabidopsis thaliana are recognized by different proteins

Author keywords

MEF25; nad1; Pentatricopeptide repeat protein; Plant mitochondria; PPR protein; RNA editing factor

Indexed keywords

DNA; MITOCHONDRIAL PROTEIN; NAD1 PROTEIN; RNA; UNCLASSIFIED DRUG;

EID: 84875237620     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2013.02.009     Document Type: Article
Times cited : (15)

References (28)
  • 1
    • 0033592907 scopus 로고    scopus 로고
    • RNA editing in Arabidopsis mitochondria affects 441 C to U changes in ORFs
    • P. Giegé, and A. Brennicke RNA editing in Arabidopsis mitochondria affects 441 C to U changes in ORFs Proc. Natl. Acad. Sci. USA 96 1999 15324 15329
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 15324-15329
    • Giegé, P.1    Brennicke, A.2
  • 2
    • 0034802513 scopus 로고    scopus 로고
    • Cis recognition elements in plant mitochondrion RNA editing
    • J.C. Farré, G. León, X. Jordana, and A. Araya cis recognition elements in plant mitochondrion RNA editing Mol. Cell. Biol. 21 2001 6731 6737
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 6731-6737
    • Farré, J.C.1    León, G.2    Jordana, X.3    Araya, A.4
  • 3
    • 25844481583 scopus 로고    scopus 로고
    • An in vitro RNA editing system from cauliflower mitochondria: Editing site recognition parameters can vary in different plant species
    • J. Neuwirt, M. Takenaka, J.A. van der Merwe, and A. Brennicke An in vitro RNA editing system from cauliflower mitochondria: editing site recognition parameters can vary in different plant species RNA 11 2005 1563 1570
    • (2005) RNA , vol.11 , pp. 1563-1570
    • Neuwirt, J.1    Takenaka, M.2    Van Der Merwe, J.A.3    Brennicke, A.4
  • 4
    • 84859475178 scopus 로고    scopus 로고
    • Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants
    • M. Takenaka, A. Zehrmann, D. Verbitskiy, M. Kugelmann, B. Härtel, and A. Brennicke Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants Proc. Natl. Acad. Sci. USA 109 2012 5104 5109
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 5104-5109
    • Takenaka, M.1    Zehrmann, A.2    Verbitskiy, D.3    Kugelmann, M.4    Härtel, B.5    Brennicke, A.6
  • 5
    • 4043172772 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis
    • C. Lurin Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis Plant Cell 16 2004 2089 2103
    • (2004) Plant Cell , vol.16 , pp. 2089-2103
    • Lurin, C.1
  • 6
    • 64749105292 scopus 로고    scopus 로고
    • A DYW domain-containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana
    • A. Zehrmann A DYW domain-containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana Plant Cell 21 2009 558 567
    • (2009) Plant Cell , vol.21 , pp. 558-567
    • Zehrmann, A.1
  • 7
    • 79957886185 scopus 로고    scopus 로고
    • The evolution of RNA editing and pentatricopeptide repeat genes
    • S. Fujii, and I. Small The evolution of RNA editing and pentatricopeptide repeat genes New Phytol. 21 2011 37 47
    • (2011) New Phytol. , vol.21 , pp. 37-47
    • Fujii, S.1    Small, I.2
  • 8
    • 56549095978 scopus 로고    scopus 로고
    • Pentatricopeptide repeat proteins: A socket set for organelle gene expression
    • C. Schmitz-Linneweber, and I. Small Pentatricopeptide repeat proteins: a socket set for organelle gene expression Trends Plant Sci. 13 2008 663 670
    • (2008) Trends Plant Sci. , vol.13 , pp. 663-670
    • Schmitz-Linneweber, C.1    Small, I.2
  • 9
    • 67651171227 scopus 로고    scopus 로고
    • Site-specific binding of a PPR protein defines and stabilizes 5′ and 3′ mRNA termini in chloroplasts
    • J. Pfalz, O.A. Bayraktar, J. Prikryl, and A. Barkan Site-specific binding of a PPR protein defines and stabilizes 5′ and 3′ mRNA termini in chloroplasts EMBO J. 28 2009 2042 2052
    • (2009) EMBO J. , vol.28 , pp. 2042-2052
    • Pfalz, J.1    Bayraktar, O.A.2    Prikryl, J.3    Barkan, A.4
  • 10
    • 33845986746 scopus 로고    scopus 로고
    • A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing
    • K. Okuda, T. Nakamura, M. Sugita, T. Shimizu, and T. Shikanai A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing J. Biol. Chem. 281 2006 37661 37667
    • (2006) J. Biol. Chem. , vol.281 , pp. 37661-37667
    • Okuda, K.1    Nakamura, T.2    Sugita, M.3    Shimizu, T.4    Shikanai, T.5
  • 11
  • 12
    • 34249830138 scopus 로고    scopus 로고
    • Mitochondrial complex II is essential for gametophyte development in Arabidopsis
    • G. León, L. Holuigue, and X. Jordana Mitochondrial complex II is essential for gametophyte development in Arabidopsis Plant Physiol. 143 2007 1534 1546
    • (2007) Plant Physiol. , vol.143 , pp. 1534-1546
    • León, G.1    Holuigue, L.2    Jordana, X.3
  • 13
    • 77957167782 scopus 로고    scopus 로고
    • RNA editing competence of trans-factor MEF1 is modulated by ecotype-specific differences but requires the DYW domain
    • A. Zehrmann, D. Verbitskiy, B. Härtel, A. Brennicke, and M. Takenaka RNA editing competence of trans-factor MEF1 is modulated by ecotype-specific differences but requires the DYW domain FEBS Lett. 584 2011 4181 4186
    • (2011) FEBS Lett. , vol.584 , pp. 4181-4186
    • Zehrmann, A.1    Verbitskiy, D.2    Härtel, B.3    Brennicke, A.4    Takenaka, M.5
  • 14
    • 59649116355 scopus 로고    scopus 로고
    • Multiplex single-base extension typing to identify nuclear genes required for RNA editing in plant organelles
    • M. Takenaka, and A. Brennicke Multiplex single-base extension typing to identify nuclear genes required for RNA editing in plant organelles Nucleic Acids Res. 37 2009 e13
    • (2009) Nucleic Acids Res. , vol.37 , pp. 13
    • Takenaka, M.1    Brennicke, A.2
  • 15
    • 85020032400 scopus 로고    scopus 로고
    • RNA editing in plant mitochondria: Assays and biochemical approaches
    • M. Takenaka, and A. Brennicke RNA editing in plant mitochondria: assays and biochemical approaches Methods Enzymol. 424 2007 439 458
    • (2007) Methods Enzymol. , vol.424 , pp. 439-458
    • Takenaka, M.1    Brennicke, A.2
  • 16
    • 37249087896 scopus 로고    scopus 로고
    • Recombinational cloning with plant gateway vectors
    • M. Karimi, A. Depicker, and P. Hilson Recombinational cloning with plant gateway vectors Plant Physiol. 145 2007 1144 1154
    • (2007) Plant Physiol. , vol.145 , pp. 1144-1154
    • Karimi, M.1    Depicker, A.2    Hilson, P.3
  • 17
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • S.J. Clough, and A.F. Bent Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana Plant J. 16 1998 735 743
    • (1998) Plant J. , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 18
    • 73449139768 scopus 로고    scopus 로고
    • Tape-Arabidopsis Sandwich-simpler Arabidopsis protoplast isolation method
    • F.H. Wu, S.C. Shen, L.Y. Lee, S.H. Lee, M.T. Chan, and C.S. Lin Tape-Arabidopsis Sandwich-simpler Arabidopsis protoplast isolation method Plant Methods 5 2009 16
    • (2009) Plant Methods , vol.5 , pp. 16
    • Wu, F.H.1    Shen, S.C.2    Lee, L.Y.3    Lee, S.H.4    Chan, M.T.5    Lin, C.S.6
  • 19
    • 33244458857 scopus 로고    scopus 로고
    • A nuclear gene for the iron-sulfur subunit of mitochondrial complex II is specifically expressed during Arabidopsis seed development and germination
    • A. Elorza, H. Roschzttardtz, I. Gómez, A. Mouras, L. Holuigue, A. Araya, and X. Jordana A nuclear gene for the iron-sulfur subunit of mitochondrial complex II is specifically expressed during Arabidopsis seed development and germination Plant Cell Physiol. 47 2006 14 21
    • (2006) Plant Cell Physiol. , vol.47 , pp. 14-21
    • Elorza, A.1    Roschzttardtz, H.2    Gómez, I.3    Mouras, A.4    Holuigue, L.5    Araya, A.6    Jordana, X.7
  • 20
    • 79958144995 scopus 로고    scopus 로고
    • Proteomic approach to characterize mitochondrial complex i from plants
    • J. Klodmann, and H.P. Braun Proteomic approach to characterize mitochondrial complex I from plants Phytochemistry 72 2011 1071 1080
    • (2011) Phytochemistry , vol.72 , pp. 1071-1080
    • Klodmann, J.1    Braun, H.P.2
  • 21
    • 0031021278 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides
    • M. Unseld, J.R. Marienfeld, P. Brandt, and A. Brennicke The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides Nat. Genet. 15 1997 57 61
    • (1997) Nat. Genet. , vol.15 , pp. 57-61
    • Unseld, M.1    Marienfeld, J.R.2    Brandt, P.3    Brennicke, A.4
  • 22
    • 84865485271 scopus 로고    scopus 로고
    • SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism
    • Q. Zhu SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism Plant J. 71 2012 836 849
    • (2012) Plant J. , vol.71 , pp. 836-849
    • Zhu, Q.1
  • 23
    • 79954584259 scopus 로고    scopus 로고
    • A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii
    • F. Grewe, S. Herres, P. Viehover, M. Polsakiewicz, B. Weisshaar, and V. Knoop A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii Nucleic Acids Res. 39 2012 2890 2902
    • (2012) Nucleic Acids Res. , vol.39 , pp. 2890-2902
    • Grewe, F.1    Herres, S.2    Viehover, P.3    Polsakiewicz, M.4    Weisshaar, B.5    Knoop, V.6
  • 24
    • 77952149904 scopus 로고    scopus 로고
    • The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript
    • E. Tasaki, M. Hattori, and M. Sugita The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript Plant J. 62 2010 560 570
    • (2010) Plant J. , vol.62 , pp. 560-570
    • Tasaki, E.1    Hattori, M.2    Sugita, M.3
  • 25
    • 75749152607 scopus 로고    scopus 로고
    • The PPR protein encoded by the LOVASTATIN INSENSITIVE 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana
    • D. Verbitskiy, A. Zehrmann, J.A. van der Merwe, A. Brennicke, and M. Takenaka The PPR protein encoded by the LOVASTATIN INSENSITIVE 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana Plant J. 61 2010 446 455
    • (2010) Plant J. , vol.61 , pp. 446-455
    • Verbitskiy, D.1    Zehrmann, A.2    Van Der Merwe, J.A.3    Brennicke, A.4    Takenaka, M.5
  • 26
    • 84866145891 scopus 로고    scopus 로고
    • A combinatorial amino acid for RNA recognition by pentatricopeptide repeat proteins
    • A. Barkan, M. Rojas, S. Fujii, A. Yap, Y.S. Chong, C.S. Bond, and I. Small A combinatorial amino acid for RNA recognition by pentatricopeptide repeat proteins PLoS Genet. 8 2012 e1002910
    • (2012) PLoS Genet. , vol.8 , pp. 1002910
    • Barkan, A.1    Rojas, M.2    Fujii, S.3    Yap, A.4    Chong, Y.S.5    Bond, C.S.6    Small, I.7
  • 27
    • 77956252019 scopus 로고    scopus 로고
    • Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana
    • M. Takenaka, D. Verbitskiy, A. Zehrmann, and A. Brennicke Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana J. Biol. Chem. 285 2010 27122 27129
    • (2010) J. Biol. Chem. , vol.285 , pp. 27122-27129
    • Takenaka, M.1    Verbitskiy, D.2    Zehrmann, A.3    Brennicke, A.4
  • 28
    • 73249140998 scopus 로고    scopus 로고
    • A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites
    • K. Hammani, K. Okuda, S.K. Tanz, A.-L. Chateigner-Boutin, T. Shikanai, and I. Small A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites Plant Cell 21 2009 3686 3699
    • (2009) Plant Cell , vol.21 , pp. 3686-3699
    • Hammani, K.1    Okuda, K.2    Tanz, S.K.3    Chateigner-Boutin, A.-L.4    Shikanai, T.5    Small, I.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.