Time-varying functional network information extracted from brief instances of spontaneous brain activity

Proceedings of the National Academy of Sciences of the United States of America

Volumn 110, Issue 11, 2013, Pages 4392-4397

  Liu, Xiao ^a   Duyn, Jeff H ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

Clustering analysis; Instantaneous coactivation; Network dynamics; Nonstationary connectivity; Resting state network

Indexed keywords

ARTICLE; BRAIN; BRAIN FUNCTION; BRAIN REGION; CONTROLLED STUDY; ELECTROENCEPHALOGRAM; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; NERVE CELL NETWORK; PRIORITY JOURNAL; REPRODUCIBILITY; TEMPORAL LOBE;

ADOLESCENT; ADULT; BRAIN; DATABASES, FACTUAL; FEMALE; HUMANS; MAGNETIC RESONANCE IMAGING; MALE; MODELS, NEUROLOGICAL;

EID: 84875045497     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1216856110     Document Type: Article

References (49)

1. Ogawa S, Lee T-M, Kay AR, Tank DW (1990) Brain magnetic resonance imaging with contrast dependent on blood oxygenation. Proc Natl Acad Sci USA 87(24):9868-9872.
2. Bandettini PA, Wong EC, Hinks RS, Tikofsky RS, Hyde JS (1992) Time course EPI of human brain function during task activation. Magn Reson Med 25(2):390-397.
3. Kwong KK, et al. (1992) Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation. Proc Natl Acad Sci USA 89(12):5675-5679.
4. Ogawa S, et al. (1992) Intrinsic signal changes accompanying sensory stimulation: Functional brain mapping with magnetic resonance imaging. Proc Natl Acad Sci USA 89(13):5951-5955.
5. Biswal B, Yetkin FZ, Haughton VM, Hyde JS (1995) Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 34(4):537-541.
6. Fox MD, Raichle ME (2007) Spontaneous fluctuations in brain activity observed with functional magnetic resonance imaging. Nat Rev Neurosci 8(9):700-711.
7. Cordes D, et al. (2000) Mapping functionally related regions of brain with functional connectivity MR imaging. AJNR Am J Neuroradiol 21(9):1636-1644.
8. Hampson M, Peterson BS, Skudlarski P, Gatenby JC, Gore JC (2002) Detection of functional connectivity using temporal correlations in MR images. Hum Brain Mapp 15(4):247-262.
9. Greicius MD, Krasnow B, Reiss AL, Menon V (2003) Functional connectivity in the resting brain: A network analysis of the default mode hypothesis. Proc Natl Acad Sci USA 100(1):253-258.
10. Fox MD, Corbetta M, Snyder AZ, Vincent JL, Raichle ME (2006) Spontaneous neuronal activity distinguishes human dorsal and ventral attention systems. Proc Natl Acad Sci USA 103(26):10046-10051.
11. Damoiseaux JS, et al. (2006) Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci USA 103(37):13848-13853.
12. Vincent JL, et al. (2007) Intrinsic functional architecture in the anaesthetized monkey brain. Nature 447(7140):83-86.
13. Fair DA, et al. (2007) Development of distinct control networks through segregation and integration. Proc Natl Acad Sci USA 104(33):13507-13512.
14. Fair DA, et al. (2008) The maturing architecture of the brain's default network. Proc Natl Acad Sci USA 105(10):4028-4032.
15. Fukunaga M, et al. (2006) Large-amplitude, spatially correlated fluctuations in BOLD fMRI signals during extended rest and early sleep stages. Magn Reson Imaging 24(8):979-992.
16. Boly M, et al. (2009) Functional connectivity in the default network during resting state is preserved in a vegetative but not in a brain dead patient. Hum Brain Mapp 30(8):2393-2400.
17. Horovitz SG, et al. (2009) Decoupling of the brain's default mode network during deep sleep. Proc Natl Acad Sci USA 106(27):11376-11381.
18. Liu X, Zhu XH, Zhang Y, Chen W (2011) Neural origin of spontaneous hemodynamic fluctuations in rats under burst-suppression anesthesia condition. Cereb Cortex 21(2): 374-384.
19. Zhang D, Raichle ME (2010) Disease and the brain's dark energy. Nat Rev Neurol 6(1): 15-28.
20. de Pasquale F, et al. (2010) Temporal dynamics of spontaneous MEG activity in brain networks. Proc Natl Acad Sci USA 107(13):6040-6045.
21. Popa D, Popescu AT, Paré D (2009) Contrasting activity profile of two distributed cortical networks as a function of attentional demands. J Neurosci 29(4):1191-1201.
22. Chang C, Glover GH (2010) Time-frequency dynamics of resting-state brain connectivity measured with fMRI. Neuroimage 50(1):81-98.
23. Kang J, et al. (2011) Characterizing dynamic functional connectivity in the resting brain using variable parameter regression and Kalman filtering approaches. Neuroimage 56(3):1222-1234.
24. Hutchison RM, Womelsdorf T, Gati JS, Everling S, Menon RS (2012) Resting-state networks show dynamic functional connectivity in awake humans and anesthetized macaques. Hum Brain Mapp, in press.
25. Rack-Gomer AL, Liu TT (2012) Caffeine increases the temporal variability of restingstate BOLD connectivity in the motor cortex. Neuroimage 59(3):2994-3002.
26. Kiviniemi V, et al. (2011) A sliding time-window ICA reveals spatial variability of the default mode network in time. Brain Connect 1(4):339-347.
27. Majeed W, et al. (2011) Spatiotemporal dynamics of low frequency BOLD fluctuations in rats and humans. Neuroimage 54(2):1140-1150.
28. Tagliazucchi E, Balenzuela P, Fraiman D, Chialvo DR (2012) Criticality in large-scale brain FMRI dynamics unveiled by a novel point process analysis. Front Physiol 3:15.
29. Biswal BB, et al. (2010) Toward discovery science of human brain function. Proc Natl Acad Sci USA 107(10):4734-4739.
30. Fox MD, et al. (2005) The human brain is intrinsically organized into dynamic, anticorrelated functional networks. Proc Natl Acad Sci USA 102(27):9673-9678.
31. Seeley WW, et al. (2007) Dissociable intrinsic connectivity networks for salience processing and executive control. J Neurosci 27(9):2349-2356.
32. Smith SM, et al. (2012) Temporally-independent functional modes of spontaneous brain activity. Proc Natl Acad Sci USA 109(8):3131-3136.
33. Murphy K, Birn RM, Handwerker DA, Jones TB, Bandettini PA (2009) The impact of global signal regression on resting state correlations: Are anti-correlated networks introduced? Neuroimage 44(3):893-905.
34. Beggs JM, Plenz D (2003) Neuronal avalanches in neocortical circuits. J Neurosci 23(35):11167-11177.
35. Chialvo DR (2010) Emergent complex neural dynamics. Nat Phys 6(10):744-750.
36. de Arcangelis L, Herrmann HJ (2012) Activity-dependent neuronal model on complex networks. Front Physiol 3:62.
37. Mason MF, et al. (2007) Wandering minds: The default network and stimulusindependent thought. Science 315(5810):393-395.
38. Taylor PA, Gohel S, Di X, Walter M, Biswal BB (2012) Functional covariance networks: Obtaining resting-state networks from intersubject variability. Brain Connect 2(4):203-217.
39. Anderson JS, Ferguson MA, Lopez-Larson M, Yurgelun-Todd D (2010) Topographic maps of multisensory attention. Proc Natl Acad Sci USA 107(46):20110-20114.
40. Kelly C, et al. (2012) A convergent functional architecture of the insula emerges across imaging modalities. Neuroimage 61(4):1129-1142.
41. Zhang D, et al. (2008) Intrinsic functional relations between human cerebral cortex and thalamus. J Neurophysiol 100(4):1740-1748.
42. Liu X, Zhu XH, ChenW(2011) Baseline BOLD correlation predicts individuals' stimulusevoked BOLD responses. Neuroimage 54(3):2278-2286.
43. Hesselmann G, Kell CA, Eger E, Kleinschmidt A (2008) Spontaneous local variations in ongoing neural activity bias perceptual decisions. Proc Natl Acad Sci USA 105(31): 10984-10989.
44. Fox MD, Snyder AZ, Vincent JL, Raichle ME (2007) Intrinsic fluctuations within cortical systems account for intertrial variability in human behavior. Neuron 56(1):171-184.
45. Beckmann CF, DeLuca M, Devlin JT, Smith SM (2005) Investigations into resting-state connectivity using independent component analysis. Philos Trans R Soc Lond B Biol Sci 360(1457):1001-1013.
46. Rousseeuw PJ (1987) Silhouettes - a graphical aid to the interpretation and validation of cluster-analysis. J Comput Appl Math 20:53-65.
47. Fox MD, Zhang D, Snyder AZ, Raichle ME (2009) The global signal and observed anticorrelated resting state brain networks. J Neurophysiol 101(6):3270-3283.
48. Van Dijk KR, et al. (2010) Intrinsic functional connectivity as a tool for human connectomics: Theory, properties, and optimization. J Neurophysiol 103(1):297-321.
49. Mezer A, Yovel Y, Pasternak O, Gorfine T, Assaf Y (2009) Cluster analysis of restingstate fMRI time series. Neuroimage 45(4):1117-1125.