Identification of two SCAR markers co-segregated with the dominant Ms and recessive ms alleles in onion (Allium cepa L.)

Euphytica

Volumn 190, Issue 2, 2013, Pages 267-277

  Yang, Yan Yan ^a,b,c   Huo, Yu Meng ^a,b,c   Miao, Jun ^a,b,c   Liu, Bing Jiang ^a,b,c   Kong, Su Ping ^a,b,c   Gao, Li Min ^a,b,c   Liu, Chang ^d   Wang, Zhen Bao ^d   Tahara, Yasuki ^e   Kitano, Hidemi ^e   Wu, Xiong ^a,b,c  

^a SHANDONG PEANUT RESEARCH INSTITUTE   (China)

^b Key Laboratory for Biology of Greenhouse Vegetable of Shandong Province   (China)

^c National Center for Vegetable Improvement (Shandong Branch)   (China)

^d QINGDAO AGRICULTURAL UNIVERSITY   (China)

^e NAGOYA UNIVERSITY   (Japan)

Author keywords

Co segregation; Maintainer line; Male sterility; Ms locus; SCAR marker

Indexed keywords

ALLIUM CEPA;

EID: 84874812260     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-012-0842-6     Document Type: Article

References (33)

1. Arumuganathan K, Earle E (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9: 208-218.
2. Bang H, Cho DY, Yoo KS, Yoon MK, Patil BS, Kim S (2011) Development of simple PCR-based markers linked to the Ms locus, a restorer-of-fertility gene in onion (Allium cepa L.). Euphytica 179: 439-449.
3. Berninger E (1965) Contribution a l'etude de la sterilite male de l'oignon (Allium cepa L.). Ann Amélior Plant 15: 183-199.
4. Davis EW (1957) The distribution of the male sterility gene in onion. HortScience 70: 316-318.
5. Gökçe AF, Havey MJ (2002) Linkage equilibrium among tightly linked RFLPs and the Ms locus in open-pollinated onion populations. J Am Soc Hortic Sci 127: 944-946.
6. Gökçe AF, Sato Y, Michael J, Havey MJ (2002) Molecular tagging of the Ms locus in onion. J Am Soc Hortic Sci 127(4): 576-582.
7. Havey MJ (1993) A putative donor of S-cytoplasm and its distribution among open-pollinated populations of onion. Theor Appl Genet 86: 128-134.
8. Havey MJ (1995) Identification of cytoplasm using the polymerase chain reaction to aid in the extraction of maintainer lines from open-pollinated populations of onion. Theor Appl Genet 90: 263-268.
9. Havey MJ (2000) Diversity among male-sterility-inducing and male-fertile cytoplasms of onion. Theor Appl Genet 101: 778-782.
10. Havey MJ, Bark O (1994) Molecular confirmation that sterile cytoplasm has been introduced into open-pollinated cultivars of grano onions. J Am Soc Hortic Sci 119: 90-93.
11. Havey MJ, Randle WM (1996) Combining abilities for yield and bulb quality among long- and intermediate-day open-pollinated onion populations. J Am Soc Hortic Sci 121: 604-608.
12. Hayashi M, Ujiie A, Serizawa H, Sassa H, Kakui H, Oda T, Koba T (2011) Development of SCAR and CAPS markers linked to a recessive male sterility gene in lettuce (Lactuca sativa L.). Euphytica 180: 429-436.
13. Huo YM, Miao J, Liu BJ, Yang YY, ZHang YH, Wu X (2012) The expression of pectin methylesterase in onion flower buds is associated with the dominant male-fertility restoration allele. Plant Breed 131: 211-216.
14. Jones HA, Clarke AE (1943) Inheritance of male sterility in the onion and the production of hybrid seed. HortScience 43: 189-194.
15. Jones HA, Emsweller SL (1936) A male-sterile onion. HortScience 34: 582-585.
16. Kanzaki S, Akagi T, Masuko T, Kimura M, Yamada M, Sato A, Mitani N, Ustunomiya N, Yonemori K (2010) SCAR markers for practical application of marker-assisted selection in persimmon (Diospyros kaki Thunb.) breeding. J Japan Soc Hort Sci 79(2): 150-155.
17. Ke LP, Sun YQ, Liu PW, Yang GS (2004) Identification of AFLP fragments linked to one recessive genic male sterility (RGMS) in rapeseed (Brassica napus L.) and conversion to SCAR markers for marker-aided selection. Euphytica 138: 163-168.
18. Kim S, Lee ET, Cho DY (2009) Identification of a novel chimeric gene, orf725, and its use in development of a molecular marker for distinguishing among three cytoplasm type in onion (Allium cepa L.). Theor Appl Genet 118: 433-441.
19. King JJ, Bradeen JM, Bark O, McCallum JA, Havey MJ (1998) A low-density genetic map of onion reveals a role for tandem duplication in the evolution of an extremely large diploid genome. Theor Appl Genet 96: 52-56.
20. Kuraparthy V, Sood S, Guedira GB, Gill BS (2011) Development of a PCR assay and marker-assisted transfer of leaf rust resistance gene Lr58 into adapted winter wheats. Euphytica 180: 227-234.
21. Little T, Jones HA (1944) The distribution of the male sterility gene in varieties of onion. Herbertia 11: 310-312.
22. Liu YG, Chen YL (2007) High-efficiency thermal asymmetric interlaced PCR for amplification of unknown flanking sequences. Biotechniques 43: 649-656.
23. Lu GY, Yang GS, Fu TD (2001) Silver stained AFLP-a novel assay for DNA fingerprinting in Brassica napus. J Huazhong Agric Univ 20: 413-415.
24. Melgar S, Havey MJ (2010) The dominant Ms allele in onion shows reduced penetrance. J Am Soc Hortic Sci 135: 49-52.
25. Pathak C, Gowda R (1993) Breeding for the development of onion hybrids in India: problems and prospects. Acta Hortic 358: 239-242.
26. Sato Y (1998) PCR amplification of CMS-specific mitochondrial nucleotide sequences to identify cytoplasmic genotypes of onion (Allium cepa L.). Theor Appl Genet 96: 367-370.
27. Satoh Y, Nagai M, Mikami T, Kinoshita T (1993) The use of mitochondrial DNA polymorphism in the classification of the individual onion plants by cytoplasmic genotypes. Theor Appl Genet 86: 345-348.
28. Savelkoul PHM, Aarts HJM (1999) Amplified-fragment length polymorphism analysis: the state of an art. J Clin Microbiol 37: 3083-3091.
29. Tanksley SD, Young ND, Paterson AH (1989) RFLP mapping in plant breeding: new tools for an old science. Biotechnology 7: 257-264.
30. Tanksley SD, Ganal MW, Prince JP (1992) High density molecular linkage maps of the tomato and potato genomes. Genetics 132: 1141-1160.
31. van Heusden AW, van Ooijen JW, Vrielink-van GR, Verbeek WHJ, Wietsma WA, Kik C (2000) A genetic map of an inter-specific cross in Allium based on amplified fragment length polymorphism (AFLP™) markers. Theor Appl Genet 100: 118-126.
32. Vos P, Hogers R, Reijans M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23: 4407-4414.
33. Zhang D, Zhang Z, Yang K (2007) Identification of AFLP markers associated with embryonic root development in Populus tomentosa Carr. Silvae Genet 56: 27-32.