The design and fabrication of a fully addressable 8-tile DNA lattice

2nd Conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO 2005

Volumn , Issue , 2005, Pages 186-190

  Dwyer, Chris ^a   Park, Sung Ha ^b   LaBean, Thomas ^c   Lebeck, Alvin ^c  

^a Duke University   (United States)

^b DUKE UNIVERSITY   (United States)

^c Duke University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANNEALING PROCEDURES; TILING SYSTEMS;

NANOSCIENCE;

EID: 84874691597     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (19)

1. N. C. Seeman, "Nucleic Acid Junctions and Lattices," Journal of Theoretical Biology, vol. 99, pp. 237-247, 1982.
2. E. Winfree, F. Liu, L. A. Wenzler, and N. C. Seeman, "Design and Self-Assembly of Two-Dimensional DNA Crystals," Nature, vol. 394, pp. 539, 1998.
3. N. C. Seeman, "DNA Engineering and its Application to Nanotechnology," Trends in Biotechnology, vol. 17, pp. 437-443, 1999.
4. C. Mao, W. Sun, and N. C. Seeman, "Designed Two-Dimensional DNA Holliday Junction Arrays Visualized by Atomic Force Microscopy," in Journal of the American Chemical Society, vol. 121, 1999, pp. 5437-5443.
5. H. Yan, S. H. Park, G. Finkelstein, J. H. Reif, and T. H. LaBean, "DNA Templated Self-Assembly of Protein Arrays and Highly Conductive Nanowires," Science, vol. 301, pp. 1882-1884, 2003.
6. Y. Chen and C. Mao, "Reprogramming DNA-Directed Reactions on the Basis of a DNA Conformational Change," Journal of the American Chemical Society, vol. 126, pp. 13240-13241, 2004.
7. International Technology Roadmap for Semiconductors, 2003 Edition: International Sematech, 2003.
8. L. Adleman, "Molecular Computation of Solutions to Combinatorial Problems," Science, vol. 266, pp. 1021-1024, 1994.
9. R. S. Braich, N. Chelyapov, C. Johnson, P. W. K. Rothemund, and L. Adleman, "Solution of a 20-Variable 3-SAT Problem on a DNA Computer," Science, vol. 296, pp. 499-502, 2003.
10. J. P. Patwardhan, C. Dwyer, A. R. Lebeck, and D. J. Sorin, "Circuit and System Architecture for DNA-Guided Self-Assembly of Nanoelectronics," in Foundations of Nanoscience: Self-Assembled Architectures and Devices, 2004, pp. 344-358.
11. M. Cook, P. W. K. Rothemund, and E. Winfree, "Self-assembled circuit patterns," DNA Computing Lecture Notes in Computer Science, vol. 2943, pp. 91-107, 2004.
12. N. C. Seeman, "De Novo Design of Sequences for Nucleic Acid Structural Engineering," Biomolecular Structure & Dynamics, vol. 8, pp. 573-581, 1990.
13. A. J. Hartemink, D. K. Gifford, and J. Khodor, "Automated Constraint-Based Nucleotide Sequence Selection for DNA Computation." Proceedings of the 4th DIMACS Workshop on DNA Based Computers, held at the University of Pennsylvania, 1998, pp. 227-235.
14. U. Feldkamp, S. Saghafi, W. Banzhaf, and H. Rauhe, " DNASequenceGenerator: A Program for the Construction of DNA Sequences," in Proceedings of the Seventh International Workshop on DNA Based Computers (DNA7), vol. 2340, 2001, pp. 23-32.
15. J. SantaLucia and D. Hicks, "The thermodynamics of DNA structural motifs," Annual Review of Biophysics and Biomolecular Structure, vol. 33, pp. 415-440, 2004.
16. P. Yin, B. Guo, C. Belmore, W. Palmeri, E. Winfree, T. H. LaBean, and J. H. Reif, "TileSoft: Sequence optimization software for designing DNA secondary structures," in Technical Report CS-2004-09, Dept. of Computer Science, Duke University, 2004.
17. H. Yan, S. H. Park, L. Feng, G. Finkelstein, J. H. Reif, and T. H. LaBean, "4×4 DNA Tile and Lattices: Characterization, Self-Assembly, and Metallization of a Novel DNA Nanostructure Motif," in Proceedings of the Ninth International Meeting on DNA Based Computers (DNA9), 2003.
18. N. Le Novere, "MELTING, computing the melting temperature of nucleic acid duplex," Bioinformatics, vol. 17, pp. 1226-1227, 2001.
19. N. Peyret, P. A. Seneviratne, H. T. Allawi, and J. SantaLucia, "Nearest-Neighbor Thermodynamics and NMR of DNA Sequences with Internal A-A, C-C, G-G, and T-T Mismatches," 1999.