Differentiating Intracellular from Extracellular Alkaline Phosphatase Activity in Soil by Sonication

PLoS ONE

Volumn 8, Issue 3, 2013, Pages

  Qin, Shuping ^a   Hu, Chunsheng ^a   Oenema, Oene ^b  

^a INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

^b WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ALKALINE PHOSPHATASE;

ARTICLE; BACTERIAL COUNT; COLONY FORMING UNIT; CONTROLLED STUDY; CYTOLYSIS; ENZYME ACTIVATION; ENZYME ACTIVITY; ENZYME RELEASE; ESCHERICHIA COLI; NONHUMAN; PROCESS OPTIMIZATION; SEPARATION TECHNIQUE; SOIL ANALYSIS; SOIL MICROFLORA; TEMPERATURE SENSITIVITY; ULTRASOUND;

ALKALINE PHOSPHATASE; BACTERIA; SOIL; SOIL MICROBIOLOGY; SONICATION;

EID: 84874668840     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0058691     Document Type: Article

References (31)

1. Nannipieri P, Giagnoni L, Landi L, Renella G, (2011) Role of phosphatase enzymes in soil. In Bunemann E K, Oberson A, Frossard E (eds) Phosphorus in Action. Soil Biology 26. Springer Verlag. Berlin Heidelberg,pp. pp 215-241.
2. Wang J, Chen Z, Chen L, Zhu A, Wu Z, (2011) Surface soil phosphorus and phosphatase activities affected by tillage and crop residue input amounts. Plant, Soil and Environment 57: 251-257.
3. Guénon R, Gros R, (2013) Frequent-wildfires with shortened time-since-fire affect soil microbial functional stability to drying and rewetting events. Soil Biology and Biochemistry 57: 663-674.
4. Saha S, Prakash V, Kundu S, Kumar N, Mina BL, (2008) Soil enzymatic activity as affected by long term application of farm yard manure and mineral fertilizer under a rainfed soybean-wheat system in NW Himalaya. European Journal of Soil Biology 44: 309-315.
5. Nannipieri P, Giagnoni L, Renella G, Puglisi E, Ceccanti B, et al. (2012) Soil enzymology: classical and molecular approaches. Biology and Fertility of Soils 48: 743-762.
6. Dilly O, Nannipieri P, (1998) Intracellular and extracellular enzyme activity in soil with reference to elemental cycling. Zeitschrift Fur Pflanzenernahrung Und Bodenkunde 161: 243-248.
7. Grierson PF, Adams MA, (2000) Plant species affect acid phosphatase, ergosterol and microbial P in a Jarrah (Eucalyptus marginata Donn ex Sm.) forest in south-western Australia. Soil Biology & Biochemistry 32: 1817-1827.
8. Nannipieri P, Kandeler E, Ruggiero P (2002) Enzyme activities and microbiological and biochemical processes in soil. Enzymes in the environment Marcel Dekker, New York: 1-33.
9. Klose S, Tabatabai MA, (2002) Response of phosphatasephosphatases in soils to chloroform fumigation. Journal of Plant Nutrition and Soil Science-Zeitschrift Fur Pflanzenernahrung Und Bodenkunde 165: 429-434.
10. Margon A, Fornasier F, (2008) Determining soil enzyme location and related kinetics using rapid fumigation and high-yield extraction. Soil Biology & Biochemistry 40: 2178-2181.
11. Nannipieri P, Sastre I, Landi L, Lobo MC, Pietramellara G, (1996) Determination of extracellular neutral phosphatase activity in soil. Soil Biology & Biochemistry 28: 107-112.
12. Speir T, Ross D (1978) Soil phosphatase and sulphatase. Soil enzymes 203.
13. Renella G, Landi L, Nannipieri P, (2002) Hydrolase activities during and after the chloroform fumigation of soil as affected by protease activity. Soil Biology & Biochemistry 34: 51-60.
14. Mamba S, Kratochvil B, (1995) Application of ultrasound to dissolution of environmental samples for elemental analysis. International journal of environmental analytical chemistry 60: 295-302.
15. Yachmenev VG, Blanchard EJ, Lambert AH, (2004) Use of ultrasonic energy for intensification of the bio-preparation of greige cotton. Ultrasonics 42: 87-91.
16. Stemmer M, Gerzabek MH, Kandeler E, (1998) Organic matter and enzyme activity in particle-size fractions of soils obtained after low-energy sonication. Soil Biology & Biochemistry 30: 9-17.
17. Murage EW, Voroney PR, Kay BD, Deen B, Beyaert RP, (2007) Dynamics and turnover of soil organic matter as affected by tillage. Soil Science Society of America Journal 71: 1363-1370.
18. Ormeci B, Linden KG, (2005) Comparison of physical and chemical methods for extraction of coliform from wastewater particles and flocs. Environmental Engineering Science 22: 459-471.
19. Yeates C, Gillings M, Davison A, Altavilla N, Veal D, (1998) Methods for microbial DNA extraction from soil for PCR amplification. Biological procedures online 1: 40-47.
20. De Cesare F, Garzillo AMV, Buonocore V, Badalucco L, (2000) Use of sonication for measuring acid phosphatase activity in soil. Soil Biology & Biochemistry 32: 825-832.
21. Kong C, Wang P, Zhao H, Xu X, Zhu Y, (2008) Impact of allelochemical exuded from allelopathic rice on soil microbial community. Soil Biology and Biochemistry 40: 1862-1869.
22. Boyd SA, Mortland M, (1990) Enzyme interactions with clays and clay-organic matter complexes. Soil biochemistry 6: 1-28.
23. Stevenson I, (1958) The effect of sonic vibration on the bacterial plate count of soil. Plant and Soil 10: 1-8.
24. Ramsay AJ, (1984) Extraction of bacteria from soil: efficiency of shaking or ultrasonication as indicated by direct counts and autoradiography. Soil Biology & Biochemistry 16: 475-481.
25. Nakas J, Gould W, Klein D, (1987) Origin and expression of phosphatase activity in a semi-arid grassland soil. Soil Biology & Biochemistry 19: 13-18.
26. Tarafdar JC, Claassen N, (1988) Organic Phosphorus-Compounds as a Phosphorus Source for Higher-Plants through the Activity of Phosphatases Produced by Plant-Roots and Microorganisms. Biology and Fertility of Soils 5: 308-312.
27. Kramer S, Green DM, (2000) Acid and alkaline phosphatase dynamics and their relationship to soil microclimate in a semiarid woodland. Soil Biology & Biochemistry 32: 179-188.
28. Vargas LHM, Piao ACS, Domingos RN, Carmona EC, (2004) Ultrasound effects on invertase from Aspergillus niger. World Journal of Microbiology & Biotechnology 20: 137-142.
29. Klose S, Moore J, Tabatabai M, (1999) Arylsulfatase activity of microbial biomass in soils as affected by cropping systems. Biology and Fertility of Soils 29: 46-54.
30. Gianfreda L, Ruggiero P, (2006) Enzyme activities in soil. In Nannipier P, Smalla K (eds) Nucleic acids and proteins in soil. Soil Biology 8. Springer Verlag. Berlin Heidelberg pp pp. 257-311.
31. Udawatta RP, Kremer RJ, Garrett HE, Anderson SH, (2009) Soil enzyme activities and physical properties in a watershed managed under agroforestry and row-crop systems. Agriculture Ecosystems & Environment 131: 98-104.