-
1
-
-
10044244768
-
SiRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis
-
DOI 10.1101/gad.1217304
-
J. Liu, Y. He, R. Amasino, and X. Chen siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis Genes Dev. 18 2004 2873 2878 (Pubitemid 39602306)
-
(2004)
Genes and Development
, vol.18
, Issue.23
, pp. 2873-2878
-
-
Liu, J.1
He, Y.2
Amasino, R.3
Chen, X.4
-
2
-
-
0038459045
-
Analysis of the molecular basis of flowering time variation in Arabidopsis accessions
-
DOI 10.1104/pp.103.021212
-
S. Gazzani, A.R. Gendall, C. Lister, and C. Dean Analysis of the molecular basis of flowering time variation in Arabidopsis accessions Plant Physiol. 132 2003 1107 1114 (Pubitemid 36715107)
-
(2003)
Plant Physiology
, vol.132
, Issue.2
, pp. 1107-1114
-
-
Gazzani, S.1
Gendall, A.R.2
Lister, C.3
Dean, C.4
-
3
-
-
77249170184
-
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
-
J.A. Law, and S.E. Jacobsen Establishing, maintaining and modifying DNA methylation patterns in plants and animals Nat. Rev. Genet. 11 2010 204 220
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 204-220
-
-
Law, J.A.1
Jacobsen, S.E.2
-
4
-
-
33847037497
-
Noncoding RNAs and Gene Silencing
-
DOI 10.1016/j.cell.2007.02.016, PII S0092867407001894
-
M. Zaratiegui, D.V. Irvine, and R.A. Martienssen Noncoding RNAs and gene silencing Cell 128 2007 763 776 (Pubitemid 46273580)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 763-776
-
-
Zaratiegui, M.1
Irvine, D.V.2
Martienssen, R.A.3
-
5
-
-
78751580443
-
Differentiation of epigenetic modifications between transposons and genes
-
H. Saze, and T. Kakutani Differentiation of epigenetic modifications between transposons and genes Curr. Opin. Plant Biol. 14 2011 81 87
-
(2011)
Curr. Opin. Plant Biol.
, vol.14
, pp. 81-87
-
-
Saze, H.1
Kakutani, T.2
-
6
-
-
0042190562
-
Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis
-
DOI 10.1073/pnas.1531467100
-
S.D. Michaels, Y. He, K.C. Scortecci, and R.M. Amasino Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis Proc. Natl. Acad. Sci. USA 100 2003 10102 10107 (Pubitemid 37087074)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.17
, pp. 10102-10107
-
-
Michaels, S.D.1
He, Y.2
Scortecci, K.C.3
Amasino, R.M.4
-
7
-
-
3342927934
-
Role of transposable elements in heterochromatin and epigenetic control
-
DOI 10.1038/nature02651
-
Z. Lippman, A.V. Gendrel, M. Black, M.W. Vaughn, N. Dedhia, W.R. McCombie, K. Lavine, V. Mittal, B. May, and K.D. Kasschau Role of transposable elements in heterochromatin and epigenetic control Nature 430 2004 471 476 (Pubitemid 38987911)
-
(2004)
Nature
, vol.430
, Issue.6998
, pp. 471-476
-
-
Lippman, Z.1
Gendrel, A.-V.2
Black, M.3
Vaughn, M.W.4
Dedhia, N.5
McCombie, W.R.6
Lavine, K.7
Mittal, V.8
May, B.9
Kasschau, K.B.10
Carrington, J.C.11
Doerge, R.W.12
Colot, V.13
Martienssen, R.14
-
8
-
-
33845621109
-
Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats
-
DOI 10.1111/j.1365-313X.2006.02936.x
-
Y. Kinoshita, H. Saze, T. Kinoshita, A. Miura, W.J. Soppe, M. Koornneef, and T. Kakutani Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats Plant J. 49 2007 38 45 (Pubitemid 44952696)
-
(2007)
Plant Journal
, vol.49
, Issue.1
, pp. 38-45
-
-
Kinoshita, Y.1
Saze, H.2
Kinoshita, T.3
Miura, A.4
Soppe, W.J.J.5
Koornneef, M.6
Kakutani, T.7
-
9
-
-
0025196283
-
The A.T-DNA-binding domain of mammalian high mobility group i chromosomal proteins. A novel peptide motif for recognizing DNA structure
-
R. Reeves, and M.S. Nissen The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure J. Biol. Chem. 265 1990 8573 8582
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 8573-8582
-
-
Reeves, R.1
Nissen, M.S.2
-
10
-
-
0037057668
-
SATB1 targets chromatin remodelling to regulate genes over long distances
-
D. Yasui, M. Miyano, S.T. Cai, P. Varga-Weisz, and T. Kohwi-Shigematsu SATB1 targets chromatin remodelling to regulate genes over long distances Nature 419 2002 641 645
-
(2002)
Nature
, vol.419
, pp. 641-645
-
-
Yasui, D.1
Miyano, M.2
Cai, S.T.3
Varga-Weisz, P.4
Kohwi-Shigematsu, T.5
-
11
-
-
0038369968
-
Tissue-specific nuclear architecture and gene expession regulated by SATB1
-
DOI 10.1038/ng1146
-
S. Cai, H.J. Han, and T. Kohwi-Shigematsu Tissue-specific nuclear architecture and gene expression regulated by SATB1 Nat. Genet. 34 2003 42 51 (Pubitemid 36548789)
-
(2003)
Nature Genetics
, vol.34
, Issue.1
, pp. 42-51
-
-
Cai, S.1
Han, H.-J.2
Kohwi-Shigematsu, T.3
-
12
-
-
0033637356
-
The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene
-
W.J. Soppe, S.E. Jacobsen, C. Alonso-Blanco, J.P. Jackson, T. Kakutani, M. Koornneef, and A.J. Peeters The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene Mol. Cell 6 2000 791 802
-
(2000)
Mol. Cell
, vol.6
, pp. 791-802
-
-
Soppe, W.J.1
Jacobsen, S.E.2
Alonso-Blanco, C.3
Jackson, J.P.4
Kakutani, T.5
Koornneef, M.6
Peeters, A.J.7
-
13
-
-
0842289249
-
Regulation of flowering time by FVE, a retinoblastoma-associated protein
-
DOI 10.1038/ng1295
-
I. Ausín, C. Alonso-Blanco, J.A. Jarillo, L. Ruiz-García, and J.M. Martínez-Zapater Regulation of flowering time by FVE, a retinoblastoma-associated protein Nat. Genet. 36 2004 162 166 (Pubitemid 38174375)
-
(2004)
Nature Genetics
, vol.36
, Issue.2
, pp. 162-166
-
-
Ausin, I.1
Alonso-Blanco, C.2
Jarillo, J.A.3
Ruiz-Garcia, L.4
Martinez-Zapater, J.M.5
-
14
-
-
81755187316
-
Arabidopsis homologs of retinoblastoma-associated protein 46/48 associate with a histone deacetylase to act redundantly in chromatin silencing
-
X. Gu, D. Jiang, W. Yang, Y. Jacob, S.D. Michaels, and Y. He Arabidopsis homologs of retinoblastoma-associated protein 46/48 associate with a histone deacetylase to act redundantly in chromatin silencing PLoS Genet. 7 2011 e1002366
-
(2011)
PLoS Genet.
, vol.7
, pp. 1002366
-
-
Gu, X.1
Jiang, D.2
Yang, W.3
Jacob, Y.4
Michaels, S.D.5
He, Y.6
-
15
-
-
40749094918
-
SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis
-
DOI 10.1038/nature06781, PII NATURE06781
-
H.J. Han, J. Russo, Y. Kohwi, and T. Kohwi-Shigematsu SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis Nature 452 2008 187 193 (Pubitemid 351380252)
-
(2008)
Nature
, vol.452
, Issue.7184
, pp. 187-193
-
-
Han, H.-J.1
Russo, J.2
Kohwi, Y.3
Kohwi-Shigematsu, T.4
-
16
-
-
72949097670
-
AGAMOUS controls GIANT KILLER, a multifunctional chromatin modifier in reproductive organ patterning and differentiation
-
K.H. Ng, H. Yu, and T. Ito AGAMOUS controls GIANT KILLER, a multifunctional chromatin modifier in reproductive organ patterning and differentiation PLoS Biol. 7 2009 e1000251
-
(2009)
PLoS Biol.
, vol.7
, pp. 1000251
-
-
Ng, K.H.1
Yu, H.2
Ito, T.3
-
17
-
-
84860870449
-
The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis
-
J. Yun, Y.S. Kim, J.H. Jung, P.J. Seo, and C.M. Park The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis J. Biol. Chem. 287 2012 15307 15316
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 15307-15316
-
-
Yun, J.1
Kim, Y.S.2
Jung, J.H.3
Seo, P.J.4
Park, C.M.5
-
18
-
-
33745393624
-
Highly specific gene silencing by artificial microRNAs in Arabidopsis
-
DOI 10.1105/tpc.105.039834
-
R. Schwab, S. Ossowski, M. Riester, N. Warthmann, and D. Weigel Highly specific gene silencing by artificial microRNAs in Arabidopsis Plant Cell 18 2006 1121 1133 (Pubitemid 43956120)
-
(2006)
Plant Cell
, vol.18
, Issue.5
, pp. 1121-1133
-
-
Schwab, R.1
Ossowski, S.2
Riester, M.3
Warthmann, N.4
Weigel, D.5
-
19
-
-
36249021568
-
Global expression profiling applied to the analysis of arabidopsis stamen development
-
DOI 10.1104/pp.107.104422
-
M. Alves-Ferreira, F. Wellmer, A. Banhara, V. Kumar, J.L. Riechmann, and E.M. Meyerowitz Global expression profiling applied to the analysis of Arabidopsis stamen development Plant Physiol. 145 2007 747 762 (Pubitemid 350127611)
-
(2007)
Plant Physiology
, vol.145
, Issue.3
, pp. 747-762
-
-
Alves-Ferreira, M.1
Wellmer, F.2
Banhara, A.3
Kumar, V.4
Riechmann, J.L.5
Meyerowitz, E.M.6
-
20
-
-
77950420409
-
Seasonal and developmental timing of flowering
-
R. Amasino Seasonal and developmental timing of flowering Plant J. 61 2010 1001 1013
-
(2010)
Plant J.
, vol.61
, pp. 1001-1013
-
-
Amasino, R.1
-
21
-
-
0345189367
-
Regulation of Flowering Time by Histone Acetylation in Arabidopsis
-
DOI 10.1126/science.1091109
-
Y. He, S.D. Michaels, and R.M. Amasino Regulation of flowering time by histone acetylation in Arabidopsis Science 302 2003 1751 1754 (Pubitemid 37505736)
-
(2003)
Science
, vol.302
, Issue.5651
, pp. 1751-1754
-
-
He, Y.1
Michaels, S.D.2
Amasino, R.M.3
-
22
-
-
0035282119
-
Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1)
-
DOI 10.1101/gad.193701
-
T. Singer, C. Yordan, and R.A. Martienssen Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1) Genes Dev. 15 2001 591 602 (Pubitemid 32205147)
-
(2001)
Genes and Development
, vol.15
, Issue.5
, pp. 591-602
-
-
Singer, T.1
Yordan, C.2
Martienssen, R.A.3
-
23
-
-
43249131622
-
Small RNA-directed epigenetic natural variation in Arabidopsis thaliana
-
J.X. Zhai, J. Liu, B. Liu, P.C. Li, B.C. Meyers, X.M. Chen, and X.F. Cao Small RNA-directed epigenetic natural variation in Arabidopsis thaliana PLoS Genet. 4 2008 e1000056
-
(2008)
PLoS Genet.
, vol.4
, pp. 1000056
-
-
Zhai, J.X.1
Liu, J.2
Liu, B.3
Li, P.C.4
Meyers, B.C.5
Chen, X.M.6
Cao, X.F.7
-
24
-
-
70349276670
-
Bursts of retrotransposition reproduced in Arabidopsis
-
S. Tsukahara, A. Kobayashi, A. Kawabe, O. Mathieu, A. Miura, and T. Kakutani Bursts of retrotransposition reproduced in Arabidopsis Nature 461 2009 423 426
-
(2009)
Nature
, vol.461
, pp. 423-426
-
-
Tsukahara, S.1
Kobayashi, A.2
Kawabe, A.3
Mathieu, O.4
Miura, A.5
Kakutani, T.6
-
25
-
-
84858799768
-
Identification of an active Mutator-like element (MULE) in rice (Oryza sativa)
-
D. Gao Identification of an active Mutator-like element (MULE) in rice (Oryza sativa) Mol. Genet. Genomics 287 2012 261 271
-
(2012)
Mol. Genet. Genomics
, vol.287
, pp. 261-271
-
-
Gao, D.1
-
26
-
-
0034644643
-
Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time
-
U. Johanson, J. West, C. Lister, S. Michaels, R. Amasino, and C. Dean Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time Science 290 2000 344 347
-
(2000)
Science
, vol.290
, pp. 344-347
-
-
Johanson, U.1
West, J.2
Lister, C.3
Michaels, S.4
Amasino, R.5
Dean, C.6
-
27
-
-
0035791417
-
Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity
-
A.P. Tikhonov, L. Lavie, C. Tatout, J.L. Bennetzen, Z. Avramova, and J.M. Deragon Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity Chromosome Res. 9 2001 325 337
-
(2001)
Chromosome Res.
, vol.9
, pp. 325-337
-
-
Tikhonov, A.P.1
Lavie, L.2
Tatout, C.3
Bennetzen, J.L.4
Avramova, Z.5
Deragon, J.M.6
-
28
-
-
0037121952
-
HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA
-
DOI 10.1093/emboj/cdf663
-
W. Aufsatz, M.F. Mette, J. van der Winden, M. Matzke, and A.J. Matzke HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA EMBO J. 21 2002 6832 6841 (Pubitemid 36014555)
-
(2002)
EMBO Journal
, vol.21
, Issue.24
, pp. 6832-6841
-
-
Aufsatz, W.1
Mette, M.F.2
Van Der Winden, J.3
Matzke, M.4
Matzke, A.J.M.5
-
29
-
-
33845880624
-
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
-
DOI 10.1038/ng1929, PII NG1929
-
D. Zilberman, M. Gehring, R.K. Tran, T. Ballinger, and S. Henikoff Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription Nat. Genet. 39 2007 61 69 (Pubitemid 46026502)
-
(2007)
Nature Genetics
, vol.39
, Issue.1
, pp. 61-69
-
-
Zilberman, D.1
Gehring, M.2
Tran, R.K.3
Ballinger, T.4
Henikoff, S.5
-
30
-
-
79955591951
-
Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1
-
T.K. To, J.M. Kim, A. Matsui, Y. Kurihara, T. Morosawa, J. Ishida, M. Tanaka, T. Endo, T. Kakutani, and T. Toyoda Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1 PLoS Genet. 7 2011 e1002055
-
(2011)
PLoS Genet.
, vol.7
, pp. 1002055
-
-
To, T.K.1
Kim, J.M.2
Matsui, A.3
Kurihara, Y.4
Morosawa, T.5
Ishida, J.6
Tanaka, M.7
Endo, T.8
Kakutani, T.9
Toyoda, T.10
-
31
-
-
84855272118
-
HDA6 directly interacts with DNA methyltransferase MET1 and maintains transposable element silencing in Arabidopsis
-
X. Liu, C.W. Yu, J. Duan, M. Luo, K. Wang, G. Tian, Y. Cui, and K. Wu HDA6 directly interacts with DNA methyltransferase MET1 and maintains transposable element silencing in Arabidopsis Plant Physiol. 158 2012 119 129
-
(2012)
Plant Physiol.
, vol.158
, pp. 119-129
-
-
Liu, X.1
Yu, C.W.2
Duan, J.3
Luo, M.4
Wang, K.5
Tian, G.6
Cui, Y.7
Wu, K.8
-
32
-
-
67149086996
-
Extensive demethylation of repetitive elements during seed development underlies gene imprinting
-
M. Gehring, K.L. Bubb, and S. Henikoff Extensive demethylation of repetitive elements during seed development underlies gene imprinting Science 324 2009 1447 1451
-
(2009)
Science
, vol.324
, pp. 1447-1451
-
-
Gehring, M.1
Bubb, K.L.2
Henikoff, S.3
|