Adaptation and divergence during experimental evolution of multicellular Saccharomyces cerevisiae

Artificial Life 13: Proceedings of the 13th International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2012

Volumn , Issue , 2012, Pages 99-104

  Rebolleda Gomez, Maria ^a   Ratcliff, William ^a   Travisano, Michael ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL SYSTEMS; ECOLOGY;

CENTRIFUGE TUBES; ECOLOGICAL DIVERSITY; EVOLUTIONARY POTENTIAL; EXPERIMENTAL EVOLUTION; MORPHOLOGICAL VARIATION; MULTICELLULARITY; SIZE VARIATION; YEAST SACCHAROMYCES CEREVISIAE;

YEAST;

EID: 84874565345     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.7551/978-0-262-31050-5-ch014     Document Type: Conference Paper

References (30)

1. Blount, Z. D., Borland, C. Z., and Lenski, R. E. (2008) Historical contingency and he evolution of key innovation in an experimental population of Escherichia coli. PNAS 105(23):7899-7906.
2. Bonner, J. T. (1998). The origins of multicellularity. Integrative Biology, 1: 27-36.
3. Chase, J. M. (2010). Stochastic community assembly causes higher biodiversity in more productive environments. Science, 328: 1388-1391.
4. Crepet, W. L. and Niklas, K. J. (2009). Darwin's Second "Abominable Mystery": Why are there so many angiosperm species? Am. J. Botany, 96(1): 366-381.
5. Doebeli, M. and Dieckmann, U. 2000. Evolutionary branching and sympatric speciation caused by different types of ccological interactions. Am. Nat. 156 supplement.
6. Fraser, C., Alm, E. J., Polz, M. F., Spratt, B. G. and Hanage, W. P. (2009). The bacterial species challenge: Making sense of genetic and ecological diversity. Science, 323(5915):741-746.
7. Friesen, M. L., Saxer, G., Travisano, M. and M. Doebeli. (2004). Experimental evidence for sympatric ecological diversification due to frequency dependent competition in Escherichia coli. Evoultion, 58(2): 245-260.
8. Graham, C. H. and Fine, P. V. A. (2008). Phylogenetic beta diversity: linking ecological and evolutionary processes across space and time. Ecology Letters 11(12):1265-1277.
9. Genner, M. J. et al. (2004). Beta diversity of rock-restricted cichlid fishes in Lake Malawi: importance of environmental and spatial factors. Ecography, 27: 601-610.
10. Gould. S. J. (1989). Wonderful Life: The Burgess Shale and the Nature of History. Norton, New York, NY.
11. Ispolatov, I., Ackermann, M. and Doebeli, M. (2011). Division of labour and the evolution of multicellularity. Proc. R. Soc. B, doi:10.1098/rspb.2011. 1999
12. Kerr, B., Riley, M. A., Feldman, M. W. and Bohannan, B. J. M. (2002). Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors. Nature, 418: 171-174.
13. Koschwanez, J. H., Foster, K. R., Murray, A. W. (2011). Sucrose utilization in budding yeast as a model for the origin of undifferentiated multicellularity. PLoS Biol 9:e1001122.
14. Lenski, R. E., Rose, M. R., Simpson, S. C. and Tadler, S. C. (1991). Long-term experimental evolution in Escherichia coli I. Adaptation and divergence during 2,000 generations. American Naturalist, 138(6):1315-1341.
15. Lenski, R. E. and Travisano, M. (1994). Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations. PNAS 91:6808-6814.
16. Maynard Smith, J. and Szathmáry, E. (1995). The Major Transitions in Evolution. Oxford University Press, Oxford, England.
17. Meyer, J. R. et al. (2012). Repeatability and contingency in the evolution of a key innovation in phage lambda. Science, 335:428-432.
18. Nedelcu, A. M. and Michod, R. E. (2004). Evolvability, modularity, and individuality during the transition to multicellularity in volvocalean green algae. In Schlosser, G. and Wagner, G. P. Modularity: In Development and Evolution. University of Chicago Press. Chicago, IL.
19. Qian, H., Ricklefs, R.E. and White, P.S. (2005). Beta diversity of angiosperms in temperate floras of eastern Asia and eastern North America. Ecology Letters, 8: 15-22.
20. Qian, H., Badgley, C. and Fox, D.L. (2009). The latitudinal gradient of beta diversity in relation to climate and topography for mammals in North America. Global Ecology and Biogeography, 18:111-122.
21. Quian, H. (2009). Beta diversity in relation to dispersal ability for vascular plants in North America. Global Ecology and Biogeography, 18:327-332.
22. Rainey, P. B. and Travisano, M. (1998). Adaptive radiation in a heterogeneous environment. Nature 394:69-72.
23. Ratcliff, W. C., Denison, R. F., Borrello, M. and Travisano, M. (2012) Experimental evolution of multicellularity. PNAS doi: 10.1073/pnas.1115323109
24. Smukalla, S. et al. (2008). FLO1 is a variable green beard gene that drives biofilm-like cooperation in budding yeast. Cell, 135:726-737.
25. Sterenlny, K. (2011). Evolvability reconsidered. In Calcott, B. and Sterenlny, K. The Major Transitions in Evolution Revisited. Vienna Series in Theoretical Biology, MIT Press, Cambridge, MA.
26. Travisano, M., Mongold, J. A., Bennett, A. F. and Lenski, R. E. (1995). Experimental tests of the roles of adaptation, chance and history in evolution. Science, 267(5194):87-90.
27. Travisano, M. (1996). Long-term experimental evolution in Escherichia coli. VI. Environmental contraints on adaptation and divergence. Genetics 146:471-479.
28. Travisano, M. (2009). Long-term experimental evolution and adaptive radiation. In Garland, T. and Rose, M. R., editors, Experimental Evolution, pages 111-134, UC-Press, Berkeley and Los Angeles, California.
29. Whittaker, R. H. (1960). Vegetation of the Siskiyou mountains, Oregon and California. Ecological Monographs, 30(3):279-338.
30. Whittaker, R. J., Willis, K. J. and Field, R. (2001). Scale and species richness: towards a general, hierarchical theory of species diversity. Journal of Biogeography, 28: 453-470.