DNA Extraction and Amplification from Contemporary Polynesian Bark-Cloth

PLoS ONE

Volumn 8, Issue 2, 2013, Pages

  Moncada, Ximena ^a   Payacán, Claudia ^b   Arriaza, Francisco ^b   Lobos, Sergio ^b   Seelenfreund, Daniela ^b   Seelenfreund, Andrea ^c  

^a CENTRO DE ESTUDIOS AVANZADOS EN ZONAS ÁRIDAS CEAZA   (Chile)

^b UNIVERSITY OF CHILE   (Chile)

^c UNIVERSIDAD ACADEMIA DE HUMANISMO CRISTIANO   (Chile)

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER 1; PLANT DNA;

ARTICLE; BARK; BROUSSONETIA PAPYRIFERA; CLOTHING; CONTROLLED STUDY; DNA EXTRACTION; DNA SEQUENCE; GENE AMPLIFICATION; GENETIC VARIABILITY; MICROSATELLITE MARKER; MULBERRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYTOCHEMISTRY; PLANT FIBER; PLANT LEAF; PLANT ROOT; POLYMERASE CHAIN REACTION; POLYNESIA;

DNA; HUMANS; MICROSATELLITE REPEATS; MORUS; MUSEUMS; PAPER; PLANT BARK;

EID: 84874302486     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0056549     Document Type: Article

References (31)

1. Matthews P (1996) Ethnobotany, and the origins of Broussonetia papyrifera in Polynesia: an essay on tapa prehistory. In: Davidson JM, Irwin G, Leach BF, Pawley A, Brown D, editors. Oceanic Culture History: Essays in Honour of Roger Green. New Zealand Journal of Archaeology Special Publication. 117-132.
2. Howard M (editor) (2006) Bark-cloth of Southeast Asia. Studies in the Material Cultures of Southeast Asia 10. Bangkok: White Lotus Press. 309 p.
3. Prebble M (2008) No fruit on that beautiful shore: What plants were introduced to the subtropical Polynesian islands prior to European contact? In: Clark G, Leach F, O'Connor S, editors. Islands of Enquiry: Colonisation, seafaring and the archaeology of maritime landscapes. Terra Australis 29. ANU E-Press. 227-251.
4. Seelenfreund D, Clarke AC, Oyanedel N, Piña R, Lobos S, et al. (2010) Paper mulberry (Broussonetia papyrifera) as a commensal model for human mobility in Oceania: anthropological, botanical and genetic considerations, New Zealand J Bot 48. 3: 1-17.
5. Green RC (1979) Early Lapita art from Polynesia and Island Melanesia: Continuities in ceramic, barkcloth, and tattoo decorations. In: Mead SM, editor. Exploring the Visual Art of Oceania: Australia, Melanesia, Micronesia and Polynesia. Honolulu, University Press of Hawaii. 13-31.
6. Barker C, (2002) Plant portraits: 432. Broussonetia papyrifera, Moraceae. Curtis's Bot Magazine 19 (1): 8-18.
7. Métraux A (1971) Ethnology of Easter Island. Bernice Bishop Museum Bulletin 160. Honolulu, Hawaii. Bishop Museum Press Reprints. 432 p.
8. Olsen ME, Friis Bengtsson C, Bertelsen MF, Willerslev E, Gilbert MTP, (2012) DNA from keratinous tissue Part II: Feather. Annals of Anatomy 194: 31-35.
9. Kennedy R, (1934) Bark-cloth in Indonesia. JPS 43: 229-43.
10. Kooijman S (1988) Polynesian Barkcloth. Shire Ethnography, UK. Shire Publications Ltd. 64 p.
11. Bell LA (1988) Papyrus, Tapa, Amate and Rice Paper: paper making in Africa and the Pacific, Latin America and Southeast Asia. McMinniville, Oregon, Liliaceae Press. 464 p.
12. Colchester C (2003) Clothing the Pacific. Oxford & New York, Berg Publishers. 215 p.
13. Küchler S, Were G (2005) The Art of Clothing: A Pacific Experience. Cavendish Publishing UK. UCL Press. 171 p.
14. Rachmayanti Y, Leinemann L, Gailing O, Finkeldey R, (2009) DNA from processed and unprocessed wood: Factors influencing the isolation success. Forensic Sci Int: Genetics 3: 185-192.
15. Asif MJ, Cannon CH, (2005) DNA extraction from processed wood: a case study for the identification of an endangered timber species (Gonystylus bancanus). Plant Mol Biol Rep 23: 185-192.
16. Deguilloux M-F, Pemonge M-H, Petit RJ, (2002) Novel perspectives in wood certification and forensics: dry wood as a source of DNA. Proc Roy Soc London B 269: 1039-1046.
17. Speirs A, McConnachie G, Lowe A (2009) Chloroplast DNA from 16th century waterlogged oak in a marine environment: initial steps in sourcing the Mary Rose timbers. In: Haslam M, Robertson G, Crowther A, Nugent S, Kirkwood K, editors. Archaeological science under a microscope: studies in residue and ancient DNA analysis in honour of Thomas H. Loy. Terra Australis 30. ANU E-Press. 175-189.
18. Hartnup K, Huynen L, Te Kanawa R, Shepherd LD, Millar CD, et al. (2011) Ancient DNA recovers the origins of Māori feather cloaks. Mol Biol Evol 28(10): 2741-2750.
19. Lodhi MA, Guang-Ning Y, Norman FW, Bruce IR, (1994) A simple and efficient method for DNA extraction from grapevine cultivars and Vitis species. Plant Mol Biol Rep 12: 6-13.
20. Blattner FR, (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. BioTechniques 27: 1180-1186.
21. Hall TA, (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Series 4: 95-98.
22. Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix. Nucl Acids Res 22: 4673-4680.
23. Higgins D, Sharp PM, (1988) CLUSTAL: a package for performing multiple sequence alignments on a microcomputer. Gene 73: 337-244.
24. Zhao W, Miao X, Jia S, Pan Y, Huang Y, (2005) Isolation and characterization of microsatellite loci from the mulberry, Morus L. Plant Sci. 168: 519-525.
25. Varma A, Padh H, Shrivastava N, (2007) Plant genomic DNA isolation: An art or a science. Biotechnol J 2: 386-392.
26. Borges DB, Amorim MB, Waldschmidt AM, Mariano-Neto E, Vivas CV, et al. (2012) Optimization of DNA extraction from fresh leaf tissues of Melanoxylon brauna (Fabaceae), Genet Mol Res. 11: 1586-1591.
27. Seelenfreund D, Piña R, Ho K-Y, Lobos S, Moncada X, et al. (2011) Molecular analysis of Broussonetia papyrifera (L.) Vent. (Magnoliophyta: Urticales) from the Pacific, based on ribosomal sequences of nuclear DNA. New Zealand J Bot 49: 413-420.
28. Schlumbaum A, Tensen M, Jaenicke-Després V, (2008) Ancient plant DNA in archaeobotany. Veget Hist Archaeobot 17: 233-244.
29. Vuissoz A, Worobey M, Odegaard N, Bunce M, Machado CA, et al. (2007) The survival of PCR-amplifiable DNA in cow leather. J Archaeol Sci 34 (5): 823-829.
30. Gilbert MT, Moore W, Melchior L, Worobey M, (2007) DNA extracting from dry museum beetles without conferring external morphological damage. PlosOne 2: e272.
31. Marota I, Basile C, Ubaldi M, Rollo F, (2002) DNA decay rate in papyri and human remains from Egyptian archaeological sites. Am J Phys Anthropol 117: 310-318.