메뉴 건너뛰기




Volumn 207, Issue 6, 2013, Pages 999-1006

Detection of hepatitis C virus transmission by use of DNA mass spectrometry

Author keywords

genetic distance; network; relatedness; RNA Mass spectrometry; viral transmission

Indexed keywords

DNA; VIRUS RNA;

EID: 84874244728     PISSN: 00221899     EISSN: None     Source Type: Journal    
DOI: 10.1093/infdis/jis938     Document Type: Article
Times cited : (11)

References (46)
  • 1
    • 0033397954 scopus 로고    scopus 로고
    • Discovery of non-A, non-B hepatitis and identification of its etiology
    • Alter H. Discovery of non-A, non-B hepatitis and identification of its etiology. Am J Med 1999; 107:16S-20.
    • (1999) Am J Med , vol.107
    • Alter, H.1
  • 3
    • 0033916804 scopus 로고    scopus 로고
    • Epidemiology of hepatitis C: Geographic differences and temporal trends
    • Wasley A, Alter MJ. Epidemiology of hepatitis C: geographic differences and temporal trends. Semin Liver Dis 2000; 20:1-16.
    • (2000) Semin Liver Dis , vol.20 , pp. 1-16
    • Wasley, A.1    Alter, M.J.2
  • 4
    • 33744937945 scopus 로고    scopus 로고
    • Prevalence and screening costs of hepatitis C virus among Ugandan blood donors
    • Hladik W, Kataaha P, Mermin J, et al. Prevalence and screening costs of hepatitis C virus among Ugandan blood donors. Trop Med Int Health 2006; 11:951-4.
    • (2006) Trop Med Int Health , vol.11 , pp. 951-954
    • Hladik, W.1    Kataaha, P.2    Mermin, J.3
  • 5
    • 34247217581 scopus 로고    scopus 로고
    • An evidence of high prevalence of Hepatitis C virus in Faisalabad, Pakistan
    • Ahmad N, Asgher M, Shafique M, Qureshi JA. An evidence of high prevalence of Hepatitis C virus in Faisalabad, Pakistan. Saudi Med J 2007; 28:390-5.
    • (2007) Saudi Med J , vol.28 , pp. 390-395
    • Ahmad, N.1    Asgher, M.2    Shafique, M.3    Qureshi, J.A.4
  • 6
    • 0034635771 scopus 로고    scopus 로고
    • The role of parenteral antischistosomal therapy in the spread of hepatitis C virus in Egypt
    • Frank C, Mohamed MK, Strickland GT, et al. The role of parenteral antischistosomal therapy in the spread of hepatitis C virus in Egypt. Lancet 2000; 355:887-91.
    • (2000) Lancet , vol.355 , pp. 887-891
    • Frank, C.1    Mohamed, M.K.2    Strickland, G.T.3
  • 8
    • 0033584440 scopus 로고    scopus 로고
    • The prevalence of hepatitis C virus infection in the United States 1988 through 1994
    • Alter MJ, Kruszon-Moran D, Nainan OV, et al. The prevalence of hepatitis C virus infection in the United States, 1988 through 1994. N Engl J Med 1999; 341:556-62.
    • (1999) N Engl J Med , vol.341 , pp. 556-562
    • Alter, M.J.1    Kruszon-Moran, D.2    Nainan, O.V.3
  • 9
    • 77952180871 scopus 로고    scopus 로고
    • Hepatocellular carcinoma-United States 2001-2006
    • Hepatocellular carcinoma-United States, 2001-2006. MMWR Morb Mortal Wkly Rep 2010; 59:517-20.
    • (2010) MMWR Morb Mortal Wkly Rep , vol.59 , pp. 517-520
  • 10
    • 0028348687 scopus 로고
    • Transmission of hepatitis C virus-route, dose, and titer
    • Alter MJ. Transmission of hepatitis C virus-route, dose, and titer. N Engl J Med 1994; 330:784-6.
    • (1994) N Engl J Med , vol.330 , pp. 784-786
    • Alter, M.J.1
  • 11
    • 34250679750 scopus 로고    scopus 로고
    • Epidemiology of hepatitis C virus infection
    • Alter MJ. Epidemiology of hepatitis C virus infection. World J Gastroenterol 2007; 13:2436-41.
    • (2007) World J Gastroenterol , vol.13 , pp. 2436-2441
    • Alter, M.J.1
  • 12
    • 36549061482 scopus 로고    scopus 로고
    • Healthcare should not be a vehicle for transmission of hepatitis C virus
    • Alter MJ. Healthcare should not be a vehicle for transmission of hepatitis C virus. J Hepatol 2008; 48:2-4.
    • (2008) J Hepatol , vol.48 , pp. 2-4
    • Alter, M.J.1
  • 13
    • 77955878462 scopus 로고    scopus 로고
    • Epidemiology, surveillance, and prevention of hepatitis C virus infections in hemodialysis patients
    • Patel PR, Thompson ND, Kallen AJ, Arduino MJ. Epidemiology, surveillance, and prevention of hepatitis C virus infections in hemodialysis patients. Am J Kidney Dis 2010; 56:371-8.
    • (2010) Am J Kidney Dis , vol.56 , pp. 371-378
    • Patel, P.R.1    Thompson, N.D.2    Kallen, A.J.3    Arduino, M.J.4
  • 14
    • 0036893172 scopus 로고    scopus 로고
    • National Institutes of Health Consensus Development Conference Statement: Management of hepatitis C 2002 (June 10-12, 2002)
    • National Institutes of Health Consensus Development Conference Statement: Management of hepatitis C 2002 (June 10-12, 2002). Gastroenterology 2002; 123:2082-99.
    • (2002) Gastroenterology , vol.123 , pp. 2082-2099
  • 16
  • 17
    • 65549159248 scopus 로고    scopus 로고
    • HCV genetic variability: From quasispecies evolution to genotype classification
    • Argentini C, Genovese D, Dettori S, Rapicetta M. HCV genetic variability: from quasispecies evolution to genotype classification. Future Microbiol 2009; 4:359-73.
    • (2009) Future Microbiol , vol.4 , pp. 359-373
    • Argentini, C.1    Genovese, D.2    Dettori, S.3    Rapicetta, M.4
  • 18
    • 0026538287 scopus 로고
    • Hepatitis C virus (HCV) circulates as a population of different but closely related genomes: Quasispecies nature of HCV genome distribution
    • Martell M, Esteban JI, Quer J, et al. Hepatitis C virus (HCV) circulates as a population of different but closely related genomes: quasispecies nature of HCV genome distribution. J Virol 1992; 66:3225-9.
    • (1992) J Virol , vol.66 , pp. 3225-3229
    • Martell, M.1    Esteban, J.I.2    Quer, J.3
  • 19
    • 0028131241 scopus 로고
    • Genetic heterogeneity of hepatitis C virus
    • Okamoto H, Mishiro S. Genetic heterogeneity of hepatitis C virus. Intervirology 1994; 37:68-76.
    • (1994) Intervirology , vol.37 , pp. 68-76
    • Okamoto, H.1    Mishiro, S.2
  • 20
    • 0033224562 scopus 로고    scopus 로고
    • The molecular biology of hepatitis C virus. Genotypes and quasispecies
    • vii
    • Forns X, Bukh J. The molecular biology of hepatitis C virus. Genotypes and quasispecies. Clin Liver Dis 1999; 3:693-716, vii.
    • (1999) Clin Liver Dis , vol.3 , pp. 693-716
    • Forns, X.1    Bukh, J.2
  • 21
    • 0032143948 scopus 로고    scopus 로고
    • Comparison of amino acid sequences in hypervariable region-1 of hepatitis C virus clones between human inocula and the infected chimpanzee sera
    • Sugitani M, Shikata T. Comparison of amino acid sequences in hypervariable region-1 of hepatitis C virus clones between human inocula and the infected chimpanzee sera. Virus Res 1998; 56:177-82.
    • (1998) Virus Res , vol.56 , pp. 177-182
    • Sugitani, M.1    Shikata, T.2
  • 22
    • 0031825974 scopus 로고    scopus 로고
    • Degree and distribution of variability in the 5′ untranslated E1, E2/NS1 and NS5 regions of the hepatitis C virus (HCV)
    • Vizmanos JL, Gonzalez-Navarro CJ, Novo FJ, et al. Degree and distribution of variability in the 5′ untranslated, E1, E2/NS1 and NS5 regions of the hepatitis C virus (HCV). J Viral Hepat 1998; 5: 227-40.
    • (1998) J Viral Hepat , vol.5 , pp. 227-240
    • Vizmanos, J.L.1    Gonzalez-Navarro, C.J.2    Novo, F.J.3
  • 23
    • 0030885467 scopus 로고    scopus 로고
    • The hepatitis C virus: Overview
    • Purcell R. The hepatitis C virus: overview. Hepatology 1997; 26:11S-14.
    • (1997) Hepatology , vol.26
    • Purcell, R.1
  • 24
    • 0031816643 scopus 로고    scopus 로고
    • Genetic heterogeneity and properties of hepatitis C virus
    • Pawlotsky JM. Genetic heterogeneity and properties of hepatitis C virus. Acta Gastroenterol Belg 1998; 61:189-91.
    • (1998) Acta Gastroenterol Belg , vol.61 , pp. 189-191
    • Pawlotsky, J.M.1
  • 25
    • 0034879336 scopus 로고    scopus 로고
    • Transmission of hepatitis C virus in a gynecological surgery setting
    • Massari M, Petrosillo N, Ippolito G, et al. Transmission of hepatitis C virus in a gynecological surgery setting. J Clin Microbiol 2001; 39: 2860-3.
    • (2001) J Clin Microbiol , vol.39 , pp. 2860-2863
    • Massari, M.1    Petrosillo, N.2    Ippolito, G.3
  • 26
    • 0036840764 scopus 로고    scopus 로고
    • Outbreak of nosocomial hepatitis c virus infection resolved by genetic analysis of HCV RNA
    • Bruguera M, Saiz JC, Franco S, et al. Outbreak of nosocomial hepatitis c virus infection resolved by genetic analysis of HCV RNA. J Clin Microbiol 2002; 40:4363-6.
    • (2002) J Clin Microbiol , vol.40 , pp. 4363-4366
    • Bruguera, M.1    Saiz, J.C.2    Franco, S.3
  • 27
    • 0033582180 scopus 로고    scopus 로고
    • Epidemiologic and molecular investigation of outbreaks of hepatitis C virus infection on a pediatric oncology service
    • Widell A, Christensson B, Wiebe T, et al. Epidemiologic and molecular investigation of outbreaks of hepatitis C virus infection on a pediatric oncology service. Ann Intern Med 1999; 130:130-4.
    • (1999) Ann Intern Med , vol.130 , pp. 130-134
    • Widell, A.1    Christensson, B.2    Wiebe, T.3
  • 28
    • 0030470530 scopus 로고    scopus 로고
    • Hepatitis C virus: Molecular biology and genetic variability
    • Brechot C. Hepatitis C virus: molecular biology and genetic variability. Dig Dis Sci 1996; 41:6S-21.
    • (1996) Dig Dis Sci , vol.41
    • Brechot, C.1
  • 29
    • 0034060990 scopus 로고    scopus 로고
    • Hepatitis C virus: Kinetics and quasispecies evolution during anti-viral therapy
    • Zeuzem S. Hepatitis C virus: kinetics and quasispecies evolution during anti-viral therapy. Forum (Genova) 2000; 10:32-42.
    • (2000) Forum (Genova) , vol.10 , pp. 32-42
    • Zeuzem, S.1
  • 30
    • 46749091188 scopus 로고    scopus 로고
    • End-point limiting-dilution real-time PCR assay for evaluation of hepatitis C virus quasispecies in serum: Performance under optimal and suboptimal conditions
    • Ramachandran S, Xia GL, Ganova-Raeva LM, Nainan OV, Khudyakov Y. End-point limiting-dilution real-time PCR assay for evaluation of hepatitis C virus quasispecies in serum: performance under optimal and suboptimal conditions. J Virol Methods 2008; 151:217-24.
    • (2008) J Virol Methods , vol.151 , pp. 217-224
    • Ramachandran, S.1    Xia, G.L.2    Ganova-Raeva, L.M.3    Nainan, O.V.4    Khudyakov, Y.5
  • 32
    • 33750347505 scopus 로고    scopus 로고
    • Hepatitis C virus infections from a contaminated radiopharmaceutical used in myocardial perfusion studies
    • Patel PR, Larson AK, Castel AD, et al. Hepatitis C virus infections from a contaminated radiopharmaceutical used in myocardial perfusion studies. JAMA 2006; 296:2005-11.
    • (2006) JAMA , vol.296 , pp. 2005-2011
    • Patel, P.R.1    Larson, A.K.2    Castel, A.D.3
  • 33
    • 68849103151 scopus 로고    scopus 로고
    • Healthcare-associated hepatitis C virus transmission among patients in an abdominal organ transplant center
    • Thompson ND, Hellinger WC, Kay RS, et al. Healthcare-associated hepatitis C virus transmission among patients in an abdominal organ transplant center. Transpl Infect Dis 2009; 11:324-9.
    • (2009) Transpl Infect Dis , vol.11 , pp. 324-329
    • Thompson, N.D.1    Hellinger, W.C.2    Kay, R.S.3
  • 34
    • 70349172979 scopus 로고    scopus 로고
    • Hepatitis C virus transmission in hemodialysis units: Importance of infection control practices and aseptic technique
    • Thompson ND, Novak RT, Datta D, et al. Hepatitis C virus transmission in hemodialysis units: importance of infection control practices and aseptic technique. Infect Control Hosp Epidemiol 2009; 30:900-3.
    • (2009) Infect Control Hosp Epidemiol , vol.30 , pp. 900-903
    • Thompson, N.D.1    Novak, R.T.2    Datta, D.3
  • 35
    • 58149384017 scopus 로고    scopus 로고
    • Nonhospital health care-associated hepatitis B and C virus transmission: United States 1998-2008
    • Thompson ND, Perz JF, Moorman AC, Holmberg SD. Nonhospital health care-associated hepatitis B and C virus transmission: United States, 1998-2008. Ann Intern Med 2009; 150:33-9.
    • (2009) Ann Intern Med , vol.150 , pp. 33-39
    • Thompson, N.D.1    Perz, J.F.2    Moorman, A.C.3    Holmberg, S.D.4
  • 36
    • 77954704435 scopus 로고    scopus 로고
    • Hepatitis C virus infections from unsafe injection practices at an endoscopy clinic in Las Vegas, Nevada 2007-2008
    • Fischer GE, Schaefer MK, Labus BJ, et al. Hepatitis C virus infections from unsafe injection practices at an endoscopy clinic in Las Vegas, Nevada, 2007-2008. Clin Infect Dis 2010; 51:267-73.
    • (2010) Clin Infect Dis , vol.51 , pp. 267-273
    • Fischer, G.E.1    Schaefer, M.K.2    Labus, B.J.3
  • 37
    • 74849094799 scopus 로고    scopus 로고
    • Molecular epidemiology of health care-associated transmission of hepatitis B and C viruses
    • Holmberg SD. Molecular epidemiology of health care-associated transmission of hepatitis B and C viruses. Clin Liver Dis 2010; 14: 37-48.
    • (2010) Clin Liver Dis , vol.14 , pp. 37-48
    • Holmberg, S.D.1
  • 38
    • 0037060034 scopus 로고    scopus 로고
    • Hepatitis C virus transmission from an anesthesiologist to a patient
    • Cody SH, Nainan OV, Garfein RS, et al. Hepatitis C virus transmission from an anesthesiologist to a patient. Arch Intern Med 2002; 162:345-50.
    • (2002) Arch Intern Med , vol.162 , pp. 345-350
    • Cody, S.H.1    Nainan, O.V.2    Garfein, R.S.3
  • 39
    • 30344441223 scopus 로고    scopus 로고
    • Selective transmission of hepatitis C virus genotypes and quasispecies in humans and experimentally infected chimpanzees
    • Nainan OV, Lu L, Gao FX, Meeks E, Robertson BH, Margolis HS. Selective transmission of hepatitis C virus genotypes and quasispecies in humans and experimentally infected chimpanzees. J Gen Virol 2006; 87:83-91.
    • (2006) J Gen Virol , vol.87 , pp. 83-91
    • Nainan, O.V.1    Lu, L.2    Gao, F.X.3    Meeks, E.4    Robertson, B.H.5    Margolis, H.S.6
  • 40
    • 77952973011 scopus 로고    scopus 로고
    • Recount: Expectation maximization based error correction tool for next generation sequencing data
    • Wijaya E, Frith MC, Suzuki Y, Horton P. Recount: expectation maximization based error correction tool for next generation sequencing data. Genome Inform 2009; 23:189-201.
    • (2009) Genome Inform , vol.23 , pp. 189-201
    • Wijaya, E.1    Frith, M.C.2    Suzuki, Y.3    Horton, P.4
  • 42
    • 0347865719 scopus 로고    scopus 로고
    • SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry
    • Bocker S. SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry. Bioinformatics 2003; 19(Suppl 1): i44-53.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Bocker, S.1
  • 43
    • 9144230633 scopus 로고    scopus 로고
    • High-throughput MALDI-TOF discovery of genomic sequence polymorphisms
    • Stanssens P, Zabeau M, Meersseman G, et al. High-throughput MALDI-TOF discovery of genomic sequence polymorphisms. Genome Res 2004; 14:126-33.
    • (2004) Genome Res , vol.14 , pp. 126-133
    • Stanssens, P.1    Zabeau, M.2    Meersseman, G.3
  • 44
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987; 4:406-25.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 45
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980; 16:111-20.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 46
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier L, Smouse P, and Quattro J. Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 1992; 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.2    Quattro, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.