Functional annotation of the microRNA-mediated network in gigantomastia by integrating microRNA and mRNA expression profiling

Chinese Medical Journal

Volumn 126, Issue 4, 2013, Pages 740-746

  Li, Jing Yi ^a   Mu, Da Li ^a   Mu, Lan Hua ^a   Xin, Min Qiang ^a   Luan, Jie ^a  

^a PLASTIC SURGERY HOSPITAL   (China)

Author keywords

Gigantomastia; miRNA; mRNA; Network

Indexed keywords

ACTIVATING TRANSCRIPTION FACTOR 2; ADENYLATE CYCLASE; BETA ARRESTIN 1; CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE II; DUAL SPECIFICITY PHOSPHATASE 3; DUAL SPECIFICITY PHOSPHATASE 6; MESSENGER RNA; MICRORNA; MITOGEN ACTIVATED PROTEIN KINASE PHOSPHATASE 1; NEUROTROPHIN; PROTEIN FOS; PROTEIN KINASE B;

ADULT; ARTICLE; BREAST HYPERPLASIA; CONTROLLED STUDY; DOWN REGULATION; FEMALE; GENE EXPRESSION PROFILING; HUMAN; HUMAN TISSUE; MICROARRAY ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; RNA EXTRACTION; UPREGULATION; WNT SIGNALING PATHWAY;

ADULT; BREAST; FEMALE; GENE EXPRESSION PROFILING; HUMANS; HYPERTROPHY; MALE; MICRORNAS; RNA, MESSENGER;

EID: 84874159602     PISSN: 03666999     EISSN: None     Source Type: Journal    
DOI: 10.3760/cma.j.issn.0366-6999.20121419     Document Type: Article

References (21)

1. Tarallo M, Cigna E, Fino P, Lo Torto F, Scuderi N. Macromastia surgical therapy. Ann Ital Chir 2011; 82: 191-195.
2. Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004; 116: 281-297.
3. Lee Y, Kim M, Han J, Yeom KH, Lee S, Baek SH, et al. MicroRNA genes are transcribed by RNA polymerase II. EMBO J 2004; 23: 4051-4060.
4. He L, Hannon GJ. MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet 2004; 5: 522-531.
5. Lewis BP, Burge CB, Bartel DP. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005; 120: 15-20.
6. Kozomara A, Griffiths-Jones S. miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 2011; 39: 152-157.
7. Li X, Zhang J, Gao L, McClellan S, Finan MA, Butler TW, et al. MiR-181 mediates cell differentiation by interrupting the Lin28 and let-7 feedback circuit. Cell Death Differ 2012; 19: 378-386.
8. He L, Thomson JM, Hemann MT, Hernando-Monge E, Mu D, Goodson S, et al. A microRNA polycistron as a potential human oncogene. Nature 2005; 435: 828-833.
9. Cortez MA, Welsh JW, Calin GA. Circulating microRNAs as noninvasive biomarkers in breast cancer. Recent Results Cancer Res 2012; 195: 151-161.
10. Li X, Gao L, Cui Q, Gary BD, Dyess DL, Taylor W, et al. Sulindac inhibits tumor cell invasion by suppressing NF-kappa B-mediated transcription of microRNAs. Oncogene 2012; 31: 4979-4986.
11. Gao L, Gao Y, Li X, Howell P, Kumar R, Su X, et al. Aquaporins mediate the chemoresistance of human melanoma cells to arsenite. Mol Oncol 2012; 6: 81-87.
12. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000; 25: 25-29.
13. Zhang B, Kirov S, Snoddy J. WebGestalt: an integrated system for exploring gene sets in various biological contexts. Nucleic Acids Res 2005; 33: 741-748.
14. Kanehisa M, Goto S, Kawashima S, Okuno Y, Hattori M. The KEGG resource for deciphering the genome. Nucleic Acids Res 2004; 32: 277-280.
15. Grimson A, Farh KK, Johnston WK, Garrett-Engele P, Lim LP, Bartel DP. MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell 2007; 27: 91-105.
16. Dancey A, Khan M, Dawson J, Peart F. Gigantomastia--a classification and review of the literature. J Plast Reconstr Aesthet Surg 2008; 61: 493-502.
17. Noczynska A, Wasikowa R, Myczkowski T. Hypersensitivity of estrogen receptors as a cause of gigantomasty in two girls. Pol Merkur Lekarski 2001; 11: 507-509.
18. Chisamore MJ, Cunningham ME, Flores O, Wilkinson HA, Chen JD. Characterization of a novel small molecule subtype specific estrogen-related receptor alpha antagonist in MCF-7 breast cancer cells. PLoS One 2009; 4: e5624.
19. Leivonen SK, Mäkelä R, Ostling P, Kohonen P, Haapa-Paananen S, Kleivi K, et al. Protein lysate microarray analysis to identify microRNAs regulating estrogen receptor signaling in breast cancer cell lines. Oncogene 2009; 28: 3926-3936.
20. Wilkemeyer MF, Crane AM, Ledley FD. Primary structure and activity of mouse methylmalonyl-CoA mutase. Biochem J 1990; 271: 449-455.
21. Bermudez O, Pages G, Gimond C. The dual-specificity MAP kinase phosphatases: critical roles in development and cancer. Am J Physiol Cell Physiol 2010; 299: C189-C202.