메뉴 건너뛰기




Volumn 63, Issue PART2, 2013, Pages 751-754

Reclassification of Thermoproteus neutrophilus Stetter and Zillig 1989 as Pyrobaculum neutrophilum comb. nov. based on phylogenetic analysis

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME PROTEIN; RNA 16S;

EID: 84874092517     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.043091-0     Document Type: Article
Times cited : (14)

References (25)
  • 1
    • 0141939275 scopus 로고    scopus 로고
    • Pyrobaculum calidifontis sp. nov., a novel hyperthermophilic archaeon that grows in atmospheric air
    • Amo, T., Paje, M. L., Inagaki, A., Ezaki, S., Atomi, H. & Imanaka, T. (2002). Pyrobaculum calidifontis sp. nov., a novel hyperthermophilic archaeon that grows in atmospheric air. Archaea 1, 113-121.
    • (2002) Archaea , vol.1 , pp. 113-121
    • Amo, T.1    Paje, M.L.2    Inagaki, A.3    Ezaki, S.4    Atomi, H.5    Imanaka, T.6
  • 3
    • 0025221696 scopus 로고
    • Thermoproteus uzoniensis sp. nov., a new extremely thermophilic archaebacterium from Kamchatka continental hot springs
    • Bonch-Osmolovskaya, E. A., Miroshnichenko, M. L., Kostrikina, N. A., Chernych, N. A. & Zavarzin, G. A. (1990). Thermoproteus uzoniensis sp. nov., a new extremely thermophilic archaebacterium from Kamchatka continental hot springs. Arch Microbiol 154, 556-559.
    • (1990) Arch Microbiol , vol.154 , pp. 556-559
    • Bonch-Osmolovskaya, E.A.1    Miroshnichenko, M.L.2    Kostrikina, N.A.3    Chernych, N.A.4    Zavarzin, G.A.5
  • 5
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 6
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny Inference Package (Version 3.2)
    • Felsenstein, J. (1989). PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5, 164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 8
    • 0020701677 scopus 로고
    • Chemolithoautotrophic metabolism of anaerobic extremely thermophilic archaebacteria
    • Fischer, F., Zillig, W., Stetter, K. O. & Schreiber, G. (1983). Chemolithoautotrophic metabolism of anaerobic extremely thermophilic archaebacteria. Nature 301, 511-513.
    • (1983) Nature , vol.301 , pp. 511-513
    • Fischer, F.1    Zillig, W.2    Stetter, K.O.3    Schreiber, G.4
  • 10
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon, S., Dufayard, J. F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010). New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59, 307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 11
    • 0002398586 scopus 로고
    • Pyrobaculum gen. nov., a new genus of neutrophilic, rod-shaped archaebacteria from continental solfataras growing optimally at 100 uC
    • Huber, R., Kristjansson, J. K. & Stetter, K. O. (1987). Pyrobaculum gen. nov., a new genus of neutrophilic, rod-shaped archaebacteria from continental solfataras growing optimally at 100 uC. Arch Microbiol 149, 95-101.
    • (1987) Arch Microbiol , vol.149 , pp. 95-101
    • Huber, R.1    Kristjansson, J.K.2    Stetter, K.O.3
  • 12
    • 0033693825 scopus 로고    scopus 로고
    • Respiration of arsenate and selenate by hyperthermophilic archaea
    • Huber, R., Sacher, M., Vollmann, A., Huber, H. & Rose, D. (2000). Respiration of arsenate and selenate by hyperthermophilic archaea. Syst Appl Microbiol 23, 305-314.
    • (2000) Syst Appl Microbiol , vol.23 , pp. 305-314
    • Huber, R.1    Sacher, M.2    Vollmann, A.3    Huber, H.4    Rose, D.5
  • 14
    • 0036022418 scopus 로고    scopus 로고
    • Vulcanisaeta distributa gen. nov., sp. nov., and Vulcanisaeta souniana sp. nov., novel hyperthermophilic, rod-shaped crenarchaeotes isolated from hot springs in Japan
    • Itoh, T., Suzuki, K. & Nakase, T. (2002). Vulcanisaeta distributa gen. nov., sp. nov., and Vulcanisaeta souniana sp. nov., novel hyperthermophilic, rod-shaped crenarchaeotes isolated from hot springs in Japan. Int J Syst Evol Microbiol 52, 1097-1104.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1097-1104
    • Itoh, T.1    Suzuki, K.2    Nakase, T.3
  • 15
    • 77955019084 scopus 로고    scopus 로고
    • Parallelization of the MAFFT multiple sequence alignment program
    • Katoh, K. & Toh, H. (2010). Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics 26, 1899-1900.
    • (2010) Bioinformatics , vol.26 , pp. 1899-1900
    • Katoh, K.1    Toh, H.2
  • 16
    • 77957848173 scopus 로고    scopus 로고
    • Regulation of autotrophic CO2 fixation in the archaeon Thermoproteus neutrophilus
    • Ramos-Vera, W. H., Labonté, V., Weiss, M., Pauly, J. & Fuchs, G. (2010). Regulation of autotrophic CO2 fixation in the archaeon Thermoproteus neutrophilus. J Bacteriol 192, 5329-5340.
    • (2010) J Bacteriol , vol.192 , pp. 5329-5340
    • Ramos-Vera, W.H.1    Labonté, V.2    Weiss, M.3    Pauly, J.4    Fuchs, G.5
  • 17
    • 0035073128 scopus 로고    scopus 로고
    • Pyrobaculum oguniense sp. nov., a novel facultatively aerobic and hyperthermophilic archaeon growing at up to 97 uC
    • Sako, Y., Nunoura, T. & Uchida, A. (2001). Pyrobaculum oguniense sp. nov., a novel facultatively aerobic and hyperthermophilic archaeon growing at up to 97 uC. Int J Syst Evol Microbiol 51, 303-309.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 303-309
    • Sako, Y.1    Nunoura, T.2    Uchida, A.3
  • 18
    • 0022895194 scopus 로고
    • Carbon assimilation by the autotrophic thermophilic archaebacterium Thermoproteus neutrophilus
    • Schäfer, S., Barkowski, C. & Fuchs, G. (1986). Carbon assimilation by the autotrophic thermophilic archaebacterium Thermoproteus neutrophilus. Arch Microbiol 146, 301-308.
    • (1986) Arch Microbiol , vol.146 , pp. 301-308
    • Barkowski, C.1    Fuchs, G.2
  • 19
    • 0036205377 scopus 로고    scopus 로고
    • TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
    • Schmidt, H. A., Strimmer, K., Vingron, M. & von Haeseler, A. (2002). TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18, 502-504.
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 20
    • 80053913506 scopus 로고    scopus 로고
    • The complete genome sequence of Thermoproteus tenax: A physiologically versatile member of the Crenarchaeota
    • other authors
    • Siebers, B., Zaparty, M., Raddatz, G., Tjaden, B., Albers, S. V., Bell, S. D., Blombach, F., Kletzin, A., Kyrpides, N. & other authors (2011). The complete genome sequence of Thermoproteus tenax: a physiologically versatile member of the Crenarchaeota. PLoS ONE 6, e24222.
    • (2011) PLoS ONE , vol.6
    • Siebers, B.1    Zaparty, M.2    Raddatz, G.3    Tjaden, B.4    Albers, S.V.5    Bell, S.D.6    Blombach, F.7    Kletzin, A.8    Kyrpides, N.9
  • 21
    • 0024460851 scopus 로고
    • Thermoproteus neutrophilus sp. nov. In Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB, List no. 31
    • Stetter, K. O. & Zillig, W. (1989a). Thermoproteus neutrophilus sp. nov. In Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB, List no. 31. Int J Syst Bacteriol 39, 495-497.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 495-497
    • Stetter, K.O.1    Zillig, W.2
  • 22
    • 0009864051 scopus 로고
    • Thermoproteus Zillig and Stetter 1982, 267VP (effective publication Zillig and Stetter in Zillig, Stetter, Shafer, Janekovic, Wunderl, Holz and Palm 1981, 225)
    • Edited by J. T. Staley, M. P. Bryant & J. G. Holt. Baltimore: The Williams & Wilkins Co
    • Stetter, K. O. & Zillig, W. (1989b). Genus I. Thermoproteus Zillig and Stetter 1982, 267VP (effective publication Zillig and Stetter in Zillig, Stetter, Shafer, Janekovic, Wunderl, Holz and Palm 1981, 225). In Bergey's Manual of Systematic Bacteriology, vol. 3, pp. 2241. Edited by J. T. Staley, M. P. Bryant & J. G. Holt. Baltimore: The Williams & Wilkins Co.
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.3 , pp. 2241
    • Stetter, K.O.1    Zillig, W.2    Genus, I.3
  • 23
    • 0027337482 scopus 로고
    • Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum
    • Völkl, P., Huber, R., Drobner, E., Rachel, R., Burggraf, S., Trincone, A. & Stetter, K. O. (1993). Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum. Appl Environ Microbiol 59, 2918-2926.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 2918-2926
    • Huber, R.1    Drobner, E.2    Rachel, R.3    Burggraf, S.4    Trincone, A.5    Stetter, K.O.6
  • 24
    • 65449188232 scopus 로고    scopus 로고
    • Jalview Version 2-a multiple sequence alignment editor and analysis workbench
    • Waterhouse, A. M., Procter, J. B., Martin, D. M., Clamp, M. & Barton, G. J. (2009). Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25, 1189-1191.
    • (2009) Bioinformatics , vol.25 , pp. 1189-1191
    • Waterhouse, A.M.1    Procter, J.B.2    Martin, D.M.3    Clamp, M.4    Barton, G.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.