-
1
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, et al. (2008) Evolution of mammals and their gut microbes. Science 320: 1647-1651.
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
-
2
-
-
33646537767
-
Fecal bacterial diversity in a wild gorilla
-
Frey JC, Rothman JM, Pell AN, Nizeyi JB, Cranfield MR, et al. (2006) Fecal bacterial diversity in a wild gorilla. Appl Environ Microbiol 72: 3788-3792.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3788-3792
-
-
Frey, J.C.1
Rothman, J.M.2
Pell, A.N.3
Nizeyi, J.B.4
Cranfield, M.R.5
-
3
-
-
34047185356
-
Molecular analyses of the intestinal microbiota of chimpanzees in the wild and in captivity
-
Uenishi G, Fujita S, Ohashi G, Kato A, Yamauchi S, et al. (2007) Molecular analyses of the intestinal microbiota of chimpanzees in the wild and in captivity. Am J Primatol 69: 367-376.
-
(2007)
Am J Primatol
, vol.69
, pp. 367-376
-
-
Uenishi, G.1
Fujita, S.2
Ohashi, G.3
Kato, A.4
Yamauchi, S.5
-
4
-
-
40349113425
-
The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis
-
McKenna P, Hoffmann C, Minkah N, Aye PP, Lackner A, et al. (2008) The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. PLoS Pathog 4: e20.
-
(2008)
PLoS Pathog
, vol.4
-
-
McKenna, P.1
Hoffmann, C.2
Minkah, N.3
Aye, P.P.4
Lackner, A.5
-
5
-
-
67650805670
-
Effects of high- and low-fiber diets on fecal fermentation and fecal microbial populations of captive chimpanzees
-
Kisidayová S, Váradyová Z, Pristas P, Piknová M, Nigutová K, et al. (2009) Effects of high- and low-fiber diets on fecal fermentation and fecal microbial populations of captive chimpanzees. Am J Primatol 71: 548-557.
-
(2009)
Am J Primatol
, vol.71
, pp. 548-557
-
-
Kisidayová, S.1
Váradyová, Z.2
Pristas, P.3
Piknová, M.4
Nigutová, K.5
-
6
-
-
77953340555
-
Fecal bacterial diversity of human-habituated wild chimpanzees (Pan troglodytes schweinfurthii) at Mahale Mountains National Park, Western Tanzania
-
Szekely BA, Singh J, Marsh TL, Hagedorn C, Werre SR, et al. (2010) Fecal bacterial diversity of human-habituated wild chimpanzees (Pan troglodytes schweinfurthii) at Mahale Mountains National Park, Western Tanzania. Am J Primatol 72: 566-574.
-
(2010)
Am J Primatol
, vol.72
, pp. 566-574
-
-
Szekely, B.A.1
Singh, J.2
Marsh, T.L.3
Hagedorn, C.4
Werre, S.R.5
-
7
-
-
77954450173
-
Phylogenetic analysis of the fecal flora of the wild pygmy loris
-
Bo X, Zun-xi H, Xiao-yan W, Run-chi G, Xiang-hua T, et al. (2010) Phylogenetic analysis of the fecal flora of the wild pygmy loris. Am J Primatol 72: 699-706.
-
(2010)
Am J Primatol
, vol.72
, pp. 699-706
-
-
Bo, X.1
Zun-xi, H.2
Xiao-yan, W.3
Run-chi, G.4
Xiang-hua, T.5
-
8
-
-
78649752538
-
Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities
-
Yildirim S, Yeoman CJ, Sipos M, Torralba M, Wilson BA, et al. (2010) Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities. PLoS One 5: e13963.
-
(2010)
PLoS One
, vol.5
-
-
Yildirim, S.1
Yeoman, C.J.2
Sipos, M.3
Torralba, M.4
Wilson, B.A.5
-
9
-
-
78649978358
-
Evolutionary relationships of wild hominids recapitulated by gut microbial communities
-
Ochman H, Worobey M, Kuo CH, Ndjango JB, Peeters M, et al. (2010) Evolutionary relationships of wild hominids recapitulated by gut microbial communities. PLoS Biology 8: e1000546.
-
(2010)
PLoS Biology
, vol.8
-
-
Ochman, H.1
Worobey, M.2
Kuo, C.H.3
Ndjango, J.B.4
Peeters, M.5
-
10
-
-
52949115612
-
Microbiology metagenomics
-
Hugenholtz P, Tyson GW, (2008) Microbiology metagenomics. Nature 455: 481-483.
-
(2008)
Nature
, vol.455
, pp. 481-483
-
-
Hugenholtz, P.1
Tyson, G.W.2
-
11
-
-
20544444045
-
Diversity of the human intestinal flora
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, et al. (2005) Diversity of the human intestinal flora. Science 308: 1635-1638.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
-
12
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, et al. (2006) Metagenomic analysis of the human distal gut microbiome. Science 312: 1355-1359.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
-
13
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, et al. (2009) A core gut microbiome in obese and lean twins. Nature 457: 480-484.
-
(2009)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
-
14
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-65.
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
-
15
-
-
51449108782
-
Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome
-
Qu A, Brulc JM, Wilson MK, Law BF, Theoret JR, et al. (2008) Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome. PLoS One 3: e2945.
-
(2008)
PLoS One
, vol.3
-
-
Qu, A.1
Brulc, J.M.2
Wilson, M.K.3
Law, B.F.4
Theoret, J.R.5
-
16
-
-
79953025661
-
Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice
-
Swanson KS, Dowd SE, Suchodolski JS, Middelbos IS, Vester BM, et al. (2011) Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice. ISME J 5: 639-649.
-
(2011)
ISME J
, vol.5
, pp. 639-649
-
-
Swanson, K.S.1
Dowd, S.E.2
Suchodolski, J.S.3
Middelbos, I.S.4
Vester, B.M.5
-
17
-
-
79955794476
-
Comparative fecal metagenomics unveils unique functional capacity of the swine gut
-
Lamendella R, Domingo JW, Ghosh S, Martinson J, Oerther DB, (2011) Comparative fecal metagenomics unveils unique functional capacity of the swine gut. BMC Microbiol 11: 103.
-
(2011)
BMC Microbiol
, vol.11
, pp. 103
-
-
Lamendella, R.1
Domingo, J.W.2
Ghosh, S.3
Martinson, J.4
Oerther, D.B.5
-
18
-
-
84857238169
-
Gene-centric metagenomics analysis of feline intestinal microbiome using 454 junior pyrosequencing
-
Tun HM, Brar MS, Khin N, Jun L, Hui RK, et al. (2012) Gene-centric metagenomics analysis of feline intestinal microbiome using 454 junior pyrosequencing. J Microbiol Methods 88: 369-376.
-
(2012)
J Microbiol Methods
, vol.88
, pp. 369-376
-
-
Tun, H.M.1
Brar, M.S.2
Khin, N.3
Jun, L.4
Hui, R.K.5
-
19
-
-
53549118607
-
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer F, Paarmann D, D'Souza M, Olson R, Glass EM, et al. (2008) The metagenomics RAST server- a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9: 386-399.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386-399
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
-
20
-
-
38549139537
-
IMG/M: a data management and analysis system for metagenomes
-
Markowitz VM, Ivanova NN, Szeto E, Palaniappan K, Chu K, et al. (2008) IMG/M: a data management and analysis system for metagenomes. Nucleic Acid Res 36: D534-D538.
-
(2008)
Nucleic Acid Res
, vol.36
-
-
Markowitz, V.M.1
Ivanova, N.N.2
Szeto, E.3
Palaniappan, K.4
Chu, K.5
-
21
-
-
25644458211
-
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
-
Overbeek R, Begley T, Butler R, Choudhuri J, Chuang H, et al. (2005) The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res 33: 5691-5702.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5691-5702
-
-
Overbeek, R.1
Begley, T.2
Butler, R.3
Choudhuri, J.4
Chuang, H.5
-
23
-
-
58149200943
-
The carbohydrateactive enzymes database (CAZy): an expert resource for glycogenomics
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, et al. (2009) The carbohydrateactive enzymes database (CAZy): an expert resource for glycogenomics. Nucleic Acids Res 37: D233-238.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
-
24
-
-
0032919364
-
KEGG: Kyoto encyclopedia of genes and genomes
-
Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, et al. (1999) KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res 27: 29-34.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 29-34
-
-
Ogata, H.1
Goto, S.2
Sato, K.3
Fujibuchi, W.4
Bono, H.5
-
25
-
-
0031149569
-
Effect of PCR template concentration on the composition and distribution of total community 16S rDNA clone libraries
-
Chandler DP, Fredrickson JK, Brockman FJ, (1997) Effect of PCR template concentration on the composition and distribution of total community 16S rDNA clone libraries. Mol Ecol 6: 475-482.
-
(1997)
Mol Ecol
, vol.6
, pp. 475-482
-
-
Chandler, D.P.1
Fredrickson, J.K.2
Brockman, F.J.3
-
26
-
-
50949131523
-
Comparative analysis of human gut microbiota by barcoded pyrosequencing
-
Andersson AF, Lindberg M, Jakobsson H, Backhed F, Nyrén P, et al. (2008) Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS One 3: e2836.
-
(2008)
PLoS One
, vol.3
-
-
Andersson, A.F.1
Lindberg, M.2
Jakobsson, H.3
Backhed, F.4
Nyrén, P.5
-
27
-
-
77951977802
-
Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis
-
Salonen A, Nikkilä J, Jalanka-Tuovinen J, Immonen O, Rajilić-Stojanović M, et al. (2010) Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis. J Microbiol Methods 81: 127-134.
-
(2010)
J Microbiol Methods
, vol.81
, pp. 127-134
-
-
Salonen, A.1
Nikkilä, J.2
Jalanka-Tuovinen, J.3
Immonen, O.4
Rajilić-Stojanović, M.5
-
28
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
Ley RE, Peterson DA, Gordon JI, (2006) Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124: 837-848.
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
29
-
-
22144490199
-
An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system
-
Mazmanian SK, Liu CH, Tzianabos AO, Kasper DL, (2005) An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system. Cell 122: 107-118.
-
(2005)
Cell
, vol.122
, pp. 107-118
-
-
Mazmanian, S.K.1
Liu, C.H.2
Tzianabos, A.O.3
Kasper, D.L.4
-
30
-
-
44449106055
-
A microbial symbiosis factor prevents intestinal inflammatory disease
-
Mazmanian SK, Round JL, Kasper DL, (2008) A microbial symbiosis factor prevents intestinal inflammatory disease. Nature 453: 620-625.
-
(2008)
Nature
, vol.453
, pp. 620-625
-
-
Mazmanian, S.K.1
Round, J.L.2
Kasper, D.L.3
-
31
-
-
77954738601
-
Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota
-
Round JL, Mazmanian SK, (2010) Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota. Proc Natl Acad Sci USA 107: 12204-12209.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 12204-12209
-
-
Round, J.L.1
Mazmanian, S.K.2
-
32
-
-
0032852168
-
Diversity of extracellular proteolytic activities among Prevotella species from the rumen
-
Griswold KE, White BA, Mackie RI, (1999) Diversity of extracellular proteolytic activities among Prevotella species from the rumen. Curr Microbiol 39: 187-194.
-
(1999)
Curr Microbiol
, vol.39
, pp. 187-194
-
-
Griswold, K.E.1
White, B.A.2
Mackie, R.I.3
-
33
-
-
41349093562
-
Plant cell wall breakdown by anaerobic microorganisms from the mammalian digestive tract
-
Flint HJ, Bayer EA, (2008) Plant cell wall breakdown by anaerobic microorganisms from the mammalian digestive tract. Ann NY Acad Sci 1125: 280-288.
-
(2008)
Ann NY Acad Sci
, vol.1125
, pp. 280-288
-
-
Flint, H.J.1
Bayer, E.A.2
-
34
-
-
0028331531
-
-
Botta GA, Arzese A, Minisini R, Trani G (1994) Role of structural and extracellular virulence factors in gram-negative anaerobic bacteria. Clin Infect Dis (Suppl 4): S260-264.
-
, Issue.SUPPL. 4
-
-
-
35
-
-
0027282545
-
Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways
-
Marques S, Ramos JL, (1993) Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways. Molecular Microbiol 9: 923-929.
-
(1993)
Molecular Microbiol
, vol.9
, pp. 923-929
-
-
Marques, S.1
Ramos, J.L.2
-
37
-
-
22844441631
-
Substrate inhibition kinetics of phenol degradation by Pseudomonas aeruginosa and Pseudomonas fluorescence
-
Oboirien BO, Amigum B, Ojumu TV, Ogukunle OA, Adetunji OA, et al. (2005) Substrate inhibition kinetics of phenol degradation by Pseudomonas aeruginosa and Pseudomonas fluorescence. Biotechnol 4: 56-61.
-
(2005)
Biotechnol
, vol.4
, pp. 56-61
-
-
Oboirien, B.O.1
Amigum, B.2
Ojumu, T.V.3
Ogukunle, O.A.4
Adetunji, O.A.5
-
38
-
-
0036893658
-
Pseudomonas fluorescens encodes the Crohn's disease-associated I2 sequence and T-cell superantigen
-
Wei B, Huang T, Dalwadi H, Sutton CL, Bruckner D, et al. (2002) Pseudomonas fluorescens encodes the Crohn's disease-associated I2 sequence and T-cell superantigen. Infect Immun 70: 6567-6575.
-
(2002)
Infect Immun
, vol.70
, pp. 6567-6575
-
-
Wei, B.1
Huang, T.2
Dalwadi, H.3
Sutton, C.L.4
Bruckner, D.5
-
39
-
-
0037126667
-
The microbiology of butyrate formation in the human colon
-
Pryde SE, Duncan SH, Hold GL, Stewart CS, Flint HJ, (2002) The microbiology of butyrate formation in the human colon. FEMS Microbiol Lett 217: 133-139.
-
(2002)
FEMS Microbiol Lett
, vol.217
, pp. 133-139
-
-
Pryde, S.E.1
Duncan, S.H.2
Hold, G.L.3
Stewart, C.S.4
Flint, H.J.5
-
40
-
-
38449104720
-
Intestinal integrity and Akkermansia muciniphila, a mucin-degrading member of the intestinal microbiota present in infants, adults, and the elderly
-
Collado MC, Derrien M, Isolauri E, de Vos WM, Salminen S, (2007) Intestinal integrity and Akkermansia muciniphila, a mucin-degrading member of the intestinal microbiota present in infants, adults, and the elderly. Appl Environ Microbiol 73: 7767-7770.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 7767-7770
-
-
Collado, M.C.1
Derrien, M.2
Isolauri, E.3
de Vos, W.M.4
Salminen, S.5
-
41
-
-
57349131283
-
Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces
-
Scanlan PD, Marchesi JR, (2008) Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces. ISME J 2: 1183-1193.
-
(2008)
ISME J
, vol.2
, pp. 1183-1193
-
-
Scanlan, P.D.1
Marchesi, J.R.2
-
42
-
-
84864372801
-
Molecular typing of fecal eukaryotic microbiota of human infants and their respective mothers
-
Pandey PK, Siddharth J, Verma P, Bavdekar A, Patole MS, et al. (2012) Molecular typing of fecal eukaryotic microbiota of human infants and their respective mothers. J Biosci 37: 221-226.
-
(2012)
J Biosci
, vol.37
, pp. 221-226
-
-
Pandey, P.K.1
Siddharth, J.2
Verma, P.3
Bavdekar, A.4
Patole, M.S.5
-
43
-
-
0020121074
-
Microbial ecology and active ties in the rumen
-
Hobson PN, Wallace RJ, (1982) Microbial ecology and active ties in the rumen. Crit Rev Microbiol 9: 165-225.
-
(1982)
Crit Rev Microbiol
, vol.9
, pp. 165-225
-
-
Hobson, P.N.1
Wallace, R.J.2
-
44
-
-
46349085971
-
Fungi and inflammatory bowel diseases: Alterations of composition and diversity
-
Ott SJ, Kuhbacher T, Musfeldt M, Rosenstiel P, Hellmig S, et al. (2008) Fungi and inflammatory bowel diseases: Alterations of composition and diversity. Scand J Gastroenterol 43: 831-841.
-
(2008)
Scand J Gastroenterol
, vol.43
, pp. 831-841
-
-
Ott, S.J.1
Kuhbacher, T.2
Musfeldt, M.3
Rosenstiel, P.4
Hellmig, S.5
-
45
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, et al. (2006) An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444: 1027-1031.
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
-
46
-
-
67651160690
-
Characterization of genotypes of Enterocytozoon bieneusi in immunosuppressed and immunocompetent patient groups
-
Ten Hove RJ, Van Lieshout L, Beadsworth MB, Perez MA, Spee K, et al. (2009) Characterization of genotypes of Enterocytozoon bieneusi in immunosuppressed and immunocompetent patient groups. J Eukaryot Microbiol 56: 388-393.
-
(2009)
J Eukaryot Microbiol
, vol.56
, pp. 388-393
-
-
Ten Hove, R.J.1
Van Lieshout, L.2
Beadsworth, M.B.3
Perez, M.A.4
Spee, K.5
-
47
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
-
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, et al. (2007) Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res 14: 169-181.
-
(2007)
DNA Res
, vol.14
, pp. 169-181
-
-
Kurokawa, K.1
Itoh, T.2
Kuwahara, T.3
Oshima, K.4
Toh, H.5
-
48
-
-
58649098940
-
Methanogenic archaea in health and disease: a novel paradigm of microbial pathogenesis
-
Conway de Macario E, Macario AJ, (2009) Methanogenic archaea in health and disease: a novel paradigm of microbial pathogenesis. Int J Med Microbiol 299: 99-108.
-
(2009)
Int J Med Microbiol
, vol.299
, pp. 99-108
-
-
Conway de Macario, E.1
Macario, A.J.2
-
49
-
-
60549086580
-
Human gut microbiota in obesity and after gastric bypass
-
Zhang HS, DiBaise JK, Zuccolo A, Kudrna D, Braidotti M, et al. (2009) Human gut microbiota in obesity and after gastric bypass. PNAS 106: 2365-2370.
-
(2009)
PNAS
, vol.106
, pp. 2365-2370
-
-
Zhang, H.S.1
DiBaise, J.K.2
Zuccolo, A.3
Kudrna, D.4
Braidotti, M.5
-
50
-
-
84863825584
-
Methanogens in the gastro-intestinal tract of animals
-
In: Hackstein JHP (ed), Springer, Heidelberg
-
Hackstein JHP, van Alen TA (2010) Methanogens in the gastro-intestinal tract of animals. In: Hackstein JHP (ed) (Endo) symbiotic methanogens. Springer, Heidelberg.
-
(2010)
(Endo) symbiotic methanogens
-
-
Hackstein, J.H.P.1
van Alen, T.A.2
-
51
-
-
1942486000
-
Ecology of prokaryotic viruses
-
Weinbauer MG, (2004) Ecology of prokaryotic viruses. FEMS Microbiol Rev 28: 127-181.
-
(2004)
FEMS Microbiol Rev
, vol.28
, pp. 127-181
-
-
Weinbauer, M.G.1
-
52
-
-
15244342831
-
The potential role of endogenous bacteriophages in controlling invading pathogens
-
Gorski A, Weber-Dabrowska B, (2005) The potential role of endogenous bacteriophages in controlling invading pathogens. Cell Mol Life Sci 62: 511-519.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 511-519
-
-
Gorski, A.1
Weber-Dabrowska, B.2
-
53
-
-
0141891348
-
Metagenomic analyses of an uncultured viral community from human feces
-
Breitbart M, Hewson I, Felts B, Mahaffy JM, Nulton J, et al. (2003) Metagenomic analyses of an uncultured viral community from human feces. J Bacteriol 185: 6220-6223.
-
(2003)
J Bacteriol
, vol.185
, pp. 6220-6223
-
-
Breitbart, M.1
Hewson, I.2
Felts, B.3
Mahaffy, J.M.4
Nulton, J.5
-
54
-
-
44949202470
-
Phylogeny and geography predict pathogen community similarity in wild primates and humans
-
Davies TJ, Pedersen AB, (2008) Phylogeny and geography predict pathogen community similarity in wild primates and humans. Proc Biol Sci 275: 1695-1701.
-
(2008)
Proc Biol Sci
, vol.275
, pp. 1695-1701
-
-
Davies, T.J.1
Pedersen, A.B.2
-
55
-
-
0035374841
-
Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR
-
Tajima K, Aminov RI, Nagamine T, Matsui H, Nakamura M, et al. (2001) Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR. Appl Environ Microbiol 67: 2766-2774.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2766-2774
-
-
Tajima, K.1
Aminov, R.I.2
Nagamine, T.3
Matsui, H.4
Nakamura, M.5
-
56
-
-
58149327025
-
Dietary protein concentration affects intestinal microbiota of adult cats: a study using DGGE and qPCR to evaluate differences in microbial populations in the feline gastrointestinal tract
-
Lubbs DC, Vester BM, Fastinger ND, Swanson KS, (2009) Dietary protein concentration affects intestinal microbiota of adult cats: a study using DGGE and qPCR to evaluate differences in microbial populations in the feline gastrointestinal tract. J Anim Physiol Anim Nutr (Berl) 93: 113-121.
-
(2009)
J Anim Physiol Anim Nutr (Berl)
, vol.93
, pp. 113-121
-
-
Lubbs, D.C.1
Vester, B.M.2
Fastinger, N.D.3
Swanson, K.S.4
-
57
-
-
41849127118
-
Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome
-
Turnbaugh PJ, Backhed F, Fulton L, Gordon JI, (2008) Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host Microbe 3: 213-223.
-
(2008)
Cell Host Microbe
, vol.3
, pp. 213-223
-
-
Turnbaugh, P.J.1
Backhed, F.2
Fulton, L.3
Gordon, J.I.4
-
58
-
-
70350332205
-
Diets enriched in oat bran or wheat bran temporally and differentially alter the composition of the fecal community of rats
-
Abnous K, Brooks SPJ, Kwan J, Matias F, Green-Johnson J, et al. (2009) Diets enriched in oat bran or wheat bran temporally and differentially alter the composition of the fecal community of rats. J Nutr 139: 2024-2031.
-
(2009)
J Nutr
, vol.139
, pp. 2024-2031
-
-
Abnous, K.1
Brooks, S.P.J.2
Kwan, J.3
Matias, F.4
Green-Johnson, J.5
-
59
-
-
69549091772
-
Human gut bacterial communities are altered by addition of cruciferous vegetables to a controlled fruit- and vegetable-free diet
-
Li F, Hullar MAJ, Schwarz Y, Lampe JW, (2009) Human gut bacterial communities are altered by addition of cruciferous vegetables to a controlled fruit- and vegetable-free diet. J Nutr 139: 1685-1691.
-
(2009)
J Nutr
, vol.139
, pp. 1685-1691
-
-
Li, F.1
Hullar, M.A.J.2
Schwarz, Y.3
Lampe, J.W.4
-
60
-
-
0034333059
-
Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases
-
Harvey AJ, Hrmova M, De Gori R, Varghese JN, Fincher GB, (2000) Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases. Proteins 41: 257-269.
-
(2000)
Proteins
, vol.41
, pp. 257-269
-
-
Harvey, A.J.1
Hrmova, M.2
De Gori, R.3
Varghese, J.N.4
Fincher, G.B.5
-
61
-
-
0038413775
-
Bifunctional family 3 glycoside hydrolases from barley with alpha-L-arabinofuranosidase and beta-D-xylosidase activity. Characterization, primary structures, and COOH-terminal processing
-
Lee RC, Hrmova M, Burton RA, Lahnstein J, Fincher GB, (2003) Bifunctional family 3 glycoside hydrolases from barley with alpha-L-arabinofuranosidase and beta-D-xylosidase activity. Characterization, primary structures, and COOH-terminal processing. J Biol Chem 278: 5377-5387.
-
(2003)
J Biol Chem
, vol.278
, pp. 5377-5387
-
-
Lee, R.C.1
Hrmova, M.2
Burton, R.A.3
Lahnstein, J.4
Fincher, G.B.5
-
62
-
-
49449087287
-
Glycosyltransferases: structures, functions, and mechanisms
-
Lairson LL, Henrissat B, Davies GJ, Withers SG, (2008) Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem 77: 521-555.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 521-555
-
-
Lairson, L.L.1
Henrissat, B.2
Davies, G.J.3
Withers, S.G.4
-
63
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
Lindblad-Toh, K.2
Birney, E.3
Rogers, J.4
Abril, J.F.5
-
64
-
-
0025812763
-
Regulation of benzoate-CoA ligase in Rhodopseudomonas palustri
-
Kim M-K, Harwood CS, (1991) Regulation of benzoate-CoA ligase in Rhodopseudomonas palustri. FEMS Microbiol Let 83: 199-203.
-
(1991)
FEMS Microbiol Let
, vol.83
, pp. 199-203
-
-
Kim, M.-K.1
Harwood, C.S.2
-
65
-
-
0025787605
-
Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenases
-
Harayama S, Rekik M, Bairoch A, Neidle EL, Ornston LN, (1991) Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenases. J Bacteriol 173: 7540-7548.
-
(1991)
J Bacteriol
, vol.173
, pp. 7540-7548
-
-
Harayama, S.1
Rekik, M.2
Bairoch, A.3
Neidle, E.L.4
Ornston, L.N.5
-
66
-
-
0021996594
-
Hydroxylation of benzoate and its chlorinated derivatives in Aspergillus niger
-
Sahasrabudhe SR, Modi VV, (1985) Hydroxylation of benzoate and its chlorinated derivatives in Aspergillus niger. Biochem Int 10: 525-529.
-
(1985)
Biochem Int
, vol.10
, pp. 525-529
-
-
Sahasrabudhe, S.R.1
Modi, V.V.2
-
67
-
-
84858957859
-
Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways
-
Valderrama JA, Durante-Rodríguez G, Blázquez B, García JL, Carmona M, et al. (2012) Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways. J Biol Chem 287: 10494-10508.
-
(2012)
J Biol Chem
, vol.287
, pp. 10494-10508
-
-
Valderrama, J.A.1
Durante-Rodríguez, G.2
Blázquez, B.3
García, J.L.4
Carmona, M.5
-
68
-
-
0014201785
-
Microbial degradation of aromatic compounds
-
Gibson DT, (1967) Microbial degradation of aromatic compounds. Science 161: 1093-1097.
-
(1967)
Science
, vol.161
, pp. 1093-1097
-
-
Gibson, D.T.1
-
69
-
-
0006430486
-
Benzoic acid as a natural product in cultured dairy products and cheese
-
Sieber R, Bütikofer U, Bosset JO, (1995) Benzoic acid as a natural product in cultured dairy products and cheese. Int Dairy Journal 5: 227-246.
-
(1995)
Int Dairy Journal
, vol.5
, pp. 227-246
-
-
Sieber, R.1
Bütikofer, U.2
Bosset, J.O.3
-
70
-
-
33749507179
-
Effect of tea phenolics and their aromatic fecal bacterial metabolites on intestinal microbiota
-
Lee HC, Jenner AM, Low CS, Lee YK, (2006) Effect of tea phenolics and their aromatic fecal bacterial metabolites on intestinal microbiota. Res Microbiol 157: 876-884.
-
(2006)
Res Microbiol
, vol.157
, pp. 876-884
-
-
Lee, H.C.1
Jenner, A.M.2
Low, C.S.3
Lee, Y.K.4
-
71
-
-
28844472631
-
Taxonomy, distribution and status of the lesser slow loris Nycticebus pygmaeus and their implications for captive management
-
Ratajszczak R, (1998) Taxonomy, distribution and status of the lesser slow loris Nycticebus pygmaeus and their implications for captive management. Folia Primatologica 69 (suppl 1) (): 171-174.
-
(1998)
Folia Primatologica
, vol.69
, Issue.SUPPL. 1
, pp. 171-174
-
-
Ratajszczak, R.1
|