Electrochemical analysis of Shewanella oneidensis engineered to bind gold electrodes

ACS Synthetic Biology

Volumn 2, Issue 2, 2013, Pages 93-101

  Kane, Aunica L ^a   Bond, Daniel R ^a   Gralnick, Jeffrey A ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

biocatalysis; gold binding peptide; metal reduction

Indexed keywords

GOLD; IRON; OUTER MEMBRANE PROTEIN; RIBOFLAVIN; SYNTHETIC GOLD BINDING PEPTIDE; SYNTHETIC PEPTIDE; UNCLASSIFIED DRUG;

ARTICLE; CELL ADHESION; CELL RESPIRATION; CELL SURFACE; CONTROLLED STUDY; ELECTROCHEMISTRY; ELECTRODE; ELECTRON TRANSPORT; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN EXPRESSION; SHEWANELLA ONEIDENSIS; SURFACE PROPERTY;

BACTERIAL OUTER MEMBRANE PROTEINS; BIOFILMS; CARBON; CYTOCHROMES; DINITROCRESOLS; ELECTRODES; ELECTRON TRANSPORT; ELECTRONS; ESCHERICHIA COLI; FERRIC COMPOUNDS; GOLD; IRON; PORINS; RECEPTORS, VIRUS; RIBOFLAVIN; SHEWANELLA;

EID: 84874062525     PISSN: None     EISSN: 21615063     Source Type: Journal    
DOI: 10.1021/sb300042w     Document Type: Article

References (36)

1. Hau, H. H. and Gralnick, J. A. (2007) Ecology and biotechnology of the genus Shewanella Annu. Rev. Microbiol. 61, 237-258
2. Nealson, K. H. and Scott, J. (2006) Ecophysiology of the Genus Shewanella, in The Prokaryotes (Dworkin, M., Ed.), 3 rd ed., pp 1133-1151, Springer, New York.
3. Gralnick, J. A. and Newman, D. K. (2007) Extracellular respiration Mol. Microbiol. 65, 1-11
4. Coursolle, D. and Gralnick, J. A. (2010) Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1 Mol. Microbiol. 77, 995-1008
5. Shi, L., Rosso, K. M., Clarke, T. A., Richardson, D. J., Zachara, J. M., and Fredrickson, J. K. (2012) Molecular underpinnings of Fe(III) oxide reduction by Shewanella oneidensis MR-1 Front. Microbiol. 3, 50
6. Marritt, S. J., Lowe, T. G., Bye, J., McMillan, D. G. G., Shi, L., Fredrickson, J., Zachara, J., Richardson, D. J., Cheesman, M. R., Jeuken, L. J. C., and Butt, J. N. (2012) A functional description of CymA, an electron-transfer hub supporting anaerobic respiratory flexibility in Shewanella Bacteriol. J. 444, 465-474
7. Schwalb, C., Chapman, S. K., and Reid, G. A. (2003) The tetraheme cytochrome CymA is required for anaerobic respiration with dimethyl sulfoxide and nitrite in Shewanella oneidensis Biochemistry 42, 9491-9497
8. Shi, L., Squier, T. C., Zachara, J. M., and Fredrickson, J. K. (2007) Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c -type cytochromes Mol. Microbiol. 65, 12-20
9. Hartshorne, R. S., Reardon, C. L., Ross, D., Nuester, J., Clarke, T. A., Gates, A. J., Mills, P. C., Fredrickson, J. K., Zachara, J. M., Shi, L., Beliaev, A. S., Marshall, M. J., Tien, M., Brantley, S., Butt, J. N., and Richardson, D. J. (2009) Characterization of an electron conduit between bacteria and the extracellular environment Proc. Natl. Acad. Sci. U.S.A. 106, 22169-22174
10. Pitts, K. E., Dobbin, P. S., Reyes-Ramirez, F., Thomson, A. J., Richardson, D. J., and Seward, H. E. (2003) Characterization of the Shewanella oneidensis MR-1 decaheme cytochrome MtrA J. Biol. Chem. 278, 27758-27765
11. Myers, C. R. and Myers, J. M. (2002) MtrB is required for proper incorporation of the cytochromes OmcA and OmcB into the outer membrane of Shewanella putrefaciens MR-1 Appl. Environ. Microbiol. 68, 5585-5594
12. Marsili, E., Baron, D. B., Shikhare, I. D., Coursolle, D., Gralnick, J. A., and Bond, D. R. (2008) Shewanella secretes flavins that mediate extracellular electron transfer Proc. Natl. Acad. Sci. U.S.A. 105, 3968-3973
13. von Canstein, H., Ogawa, J., Shimizu, S., and Lloyd, J. R. (2008) Secretion of flavins by Shewanella species and their role in extracellular electron transfer Appl. Environ. Microbiol. 74, 615-623
14. Coursolle, D., Baron, D. B., Bond, D. R., and Gralnick, J. A. (2010) The Mtr respiratory pathway is essential for reducing flavins and electrodes in Shewanella oneidensis J. Bacteriol. 192, 467-474
15. Crittenden, S. R., Sund, C. J., and Sumner, J. J. (2006) Mediating electron transfer from bacteria to a gold electrode via a self-assembled monolayer Langmuir 22, 9473-9476
16. Sun, M., Zhang, F., Tong, Z., Sheng, G., Chen, Y., Zhao, Y., Chen, Y., Zhou, S., Liu, G., Tian, Y., and Yu, H. (2010) A gold-sputtered carbon paper as an anode for improved electricity generation from a microbial fuel cell inoculated with Shewanella oneidensis MR-1 Biosens. Bioelectron. 26, 338-343
17. Brown, S. (1997) Metal-recognition by repeating polypeptides Nat. Biotechnol. 15, 269-272
18. Sukchawalit, R., Vattanaviboon, P., Sallabhan, R., and Mongkolsuk, S. (1999) Construction and characterization of regulated L-arabinose-inducible broad host range expression vectors in Xanthomonas FEMS Microbiol. Lett. 181, 217-223
19. Thomas, P. E., Ryan, D., and Levin, W. (1976) An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels Anal. Biochem. 75, 168-176
20. Ross, D. E., Ruebush, S. S., Brantley, S. L., Hartshorne, R. S., Clarke, T. A., Richardson, D. J., and Tien, M. (2007) Characterization of protein-protein interactions involved in iron reduction by Shewanella oneidensis MR-1 Appl. Environ. Microbiol. 73, 5797-5808
21. Bretschger, O., Obraztsova, A., Sturm, C. A., Chang, I. S., Gorby, Y. A., Reed, S. B., Culley, D. E., Reardon, C. L., Barua, S., Romine, M. F., Zhou, J., Beliaev, A. S., Bouhenni, R., Saffarini, D., Mansfeld, F., Kim, B. H., Fredrickson, J. K., and Nealson, K. H. (2007) Current production and metal oxide reduction by Shewanella oneidensis MR-1 Wild Type and Mutants Appl. Environ. Microbiol. 73, 7003-7012
22. Picioreanu, C., van Loosdrecht, M. C. M., Curtis, T. P., and Scott, K. (2010) Model based evaluation of the effect of pH and electrode geometry on microbial fuel cell performance Bioelectrochemistry 78, 8-24
23. Baron, D., LaBelle, E., Coursolle, D., Gralnick, J. A., and Bond, D. R. (2009) Electrochemical measurement of electron transfer kinetics by Shewanella oneidensis MR-1 J. Biol. Chem. 284, 28865-28873
24. Firer-Sherwood, M., Pulcu, G. S., and Elliott, S. J. (2008) Electrochemical interrogations of the Mtr cytochromes from Shewanella: opening a potential window J. Biol. Inorg. Chem. 13, 849-854
25. Gorby, Y. A., Yanina, S., McLean, J. S., Rosso, K. M., Moyles, D., Dohnalkova, A., Beveridge, T. J., Chang, I. S., Kim, B. H., Kim, K. S., Culley, D. E., Reed, S. B., Romine, M. F., Saffarini, D. A., Hill, E. A., Shi, L., Elias, D. A., Kennedy, D. W., Pinchuk, G., Watanabe, K., Ishii, S., Logan, B., Nealson, K. H., and Fredrickson, J. K. (2006) Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms Proc. Natl. Acad. Sci. U.S.A. 103, 11358-11363
26. Lies, D. P., Hernandez, M. E., Kappler, A., Mielke, R. E., Gralnick, J. A., and Newman, D. K. (2005) Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms Appl. Environ. Microbiol. 71, 4414-4426
27. Ross, D. E., Brantley, S. L., and Tien, M. (2009) Kinetic characterization of OmcA and MtrC, terminal reductases involved in respiratory electron transfer for dissimilatory iron reduction in Shewanella oneidensis MR-1 Appl. Environ. Microbiol. 75, 5218-5226
28. Ruebush, S. S., Icopini, G. A., Brantley, S. L., and Tien, M. (2006) In vitro enzymatic reduction kinetics of mineral oxides by membrane fractions from Shewanella oneidensis MR-1 Geochim. Cosmochim. Acta 70, 56-70
29. Weber, G. (1950) Fluorescence of riboflavin and flavin-adenine dinucleotide Biochem. J. 47, 114-121
30. Richter, H., McCarthy, K., Nevin, K. P., Johnson, J. P., Rotello, V. M., and Lovley, D. R. (2008) Electricity generation by Geobacter sulfurreducens attached to gold electrodes Langmuir 24, 4376-4379
31. Rollefson, J. B., Stephen, C. S., Tien, M., and Bond, D. R. (2011) Identification of an extracellular polysaccharide network essential for cytochrome anchoring and biofilm formation in Geobacter sulfurreducens J. Bacteriol. 193, 1023-1033
32. Myers, C. R. and Nealson, K. H. (1988) Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor Science 240, 1319-1321
33. Saltikov, C. W. and Newman, D. K. (2003) Genetic identification of a respiratory arsenate reductase Proc. Natl. Acad. Sci. U.S.A. 100, 10983-10988
34. Hau, H. H., Gilbert, A., Coursolle, D., and Gralnick, J. A. (2008) Mechanism and consequences of anaerobic respiration of cobalt by Shewanella oneidensis strain MR-1 Appl. Environ. Microbiol. 74, 6880-6886
35. Myers, C. R. and Myers, J. M. (1992) Localization of cytochromes to the outer membrane of anaerobically grown Shewanella putrefaciens MR-1 J. Bacteriol. 174, 3429-3438
36. Ruebush, S. S., Brantley, S. L., and Tien, M. (2006) Reduction of soluble and insoluble iron forms by membrane fractions of Shewanella oneidensis grown under aerobic and anaerobic conditions Appl. Environ. Microbiol. 72, 2925-2935