Chloride-dependent spectral tuning mechanism of L-group cone visual pigments

Biochemistry

Volumn 52, Issue 7, 2013, Pages 1192-1197

  Yamashita, Takahiro ^a   Nakamura, Shuhei ^a   Tsutsui, Kei ^a,b   Morizumi, Takefumi ^a,c   Shichida, Yoshinori ^a  

^a KYOTO UNIVERSITY   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c UNIVERSITY OF TORONTO   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION MAXIMA; AMINO ACID RESIDUES; AMINO ACID SEQUENCE; COLOR DISCRIMINATION; FOUR-GROUP; GREEN PIGMENTS; GUINEA PIGS; MUTATIONAL ANALYSIS; PROTEIN MOIETY; RED SHIFT; SPECTRAL SENSITIVITY; SPECTRAL SHIFT; SPECTRAL TUNING; TYROSINE RESIDUES; VISUAL PIGMENTS;

AMINO ACIDS; COLOR VISION; MAMMALS; SPECTROSCOPY;

CHLORINE COMPOUNDS;

AMINO ACID; TYROSINE; VISUAL PIGMENT;

AMINO ACID SEQUENCE; ARTICLE; CHIMERA; COLOR DISCRIMINATION; EXPERIMENTAL GUINEA PIG; GENE MUTATION; MOLE RAT; MOUSE; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OUTCOME ASSESSMENT; PRIORITY JOURNAL; SPECTRAL SENSITIVITY;

ANIMALS; CHLORIDES; COLOR; GUINEA PIGS; HISTIDINE; MICE; MUTATION; RETINAL PIGMENTS;

EID: 84874025028     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi3016058     Document Type: Article

References (24)

1. Shichida, Y. and Imai, H. (1998) Visual pigment: G-protein-coupled receptor for light signals Cell. Mol. Life Sci. 54, 1299-1315
2. Yokoyama, S. (2000) Molecular evolution of vertebrate visual pigments Prog. Retinal Eye Res. 19, 385-419
3. Okano, T., Kojima, D., Fukada, Y., Shichida, Y., and Yoshizawa, T. (1992) Primary structures of chicken cone visual pigments: vertebrate rhodopsins have evolved out of cone visual pigments Proc. Natl. Acad. Sci. U. S. A. 89, 5932-5936
4. Crescitelli, F. (1977) Ionochromic behavior of Grecko visual pigments Science 195, 187-188
5. Fager, L. Y. and Fager, R. S. (1979) Halide control of color of the chicken cone pigment iodopsin Exp. Eye Res. 29, 401-408
6. Shichida, Y., Kato, T., Sasayama, S., Fukada, Y., and Yoshizawa, T. (1990) Effects of chloride on chicken iodopsin and the chromophore transfer reactions from iodopsin to scotopsin and B-photopsin Biochemistry 29, 5843-5848
7. Hirano, T., Imai, H., Kandori, H., and Shichida, Y. (2001) Chloride effect on iodopsin studied by low-temperature visible and infrared spectroscopies Biochemistry 40, 1385-1392
8. Hirano, T., Imai, H., and Shichida, Y. (2003) Effect of anion binding on the thermal reverse reaction of bathoiodopsin: anion stabilizes two forms of iodopsin Biochemistry 42, 12700-12707
9. Tachibanaki, S., Imamoto, Y., Imai, H., and Shichida, Y. (1995) Effect of chloride on the thermal reverse reaction of intermediates of iodopsin Biochemistry 34, 13170-13175
10. Wang, Z., Asenjo, A. B., and Oprian, D. D. (1993) Identification of the Cl(-)-binding site in the human red and green color vision pigments Biochemistry 32, 2125-2130
11. Sun, H., Macke, J. P., and Nathans, J. (1997) Mechanisms of spectral tuning in the mouse green cone pigment Proc. Natl. Acad. Sci. U. S. A. 94, 8860-8865
12. Janssen, J. W., David-Gray, Z. K., Bovee-Geurts, P. H., Nevo, E., Foster, R. G., and DeGrip, W. J. (2003) A green cone-like pigment in the 'blind' mole-rat Spalax ehrenbergi: functional expression and photochemical characterization Photochem. Photobiol. Sci. 2, 1287-1291
13. Morizumi, T., Sato, K., and Shichida, Y. (2012) Spectroscopic Analysis of Chloride Effect on the Active Intermediates of Primate L group Cone Visual Pigment Biochemistry 51, 10017-10023
14. Takebe, Y., Seiki, M., Fujisawa, J., Hoy, P., Yokota, K., Arai, K., Yoshida, M., and Arai, N. (1988) SR alpha promoter: an efficient and versatile mammalian cDNA expression system composed of the simian virus 40 early promoter and the R-U5 segment of human T-cell leukemia virus type 1 long terminal repeat Mol. Cell. Biol. 8, 466-472
15. Yokoyama, S. and Radlwimmer, F. B. (1998) The "five-sites" rule and the evolution of red and green color vision in mammals Mol. Biol. Evol. 15, 560-567
16. Yokoyama, S. and Radlwimmer, F. B. (2001) The molecular genetics and evolution of red and green color vision in vertebrates Genetics 158, 1697-1710
17. Okada, T., Fujiyoshi, Y., Silow, M., Navarro, J., Landau, E. M., and Shichida, Y. (2002) Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography Proc. Natl. Acad. Sci. U. S. A. 99, 5982-5987
18. Davies, W. I., Wilkie, S. E., Cowing, J. A., Hankins, M. W., and Hunt, D. M. (2012) Anion sensitivity and spectral tuning of middle- and long-wavelength-sensitive (MWS/LWS) visual pigments Cell. Mol. Life Sci. 69, 2455-2464
19. Radlwimmer, F. B. and Yokoyama, S. (1998) Genetic analyses of the green visual pigments of rabbit (Oryctolagus cuniculus) and rat (Rattus norvegicus) Gene 218, 103-109
20. Yokoyama, S. and Radlwimmer, F. B. (1999) The molecular genetics of red and green color vision in mammals Genetics 153, 919-932
21. Yokoyama, S., Radlwimmer, F. B., and Kawamura, S. (1998) Regeneration of ultraviolet pigments of vertebrates FEBS Lett. 423, 155-158
22. Yan, E. C., Kazmi, M. A., De, S., Chang, B. S., Seibert, C., Marin, E. P., Mathies, R. A., and Sakmar, T. P. (2002) Function of extracellular loop 2 in rhodopsin: glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II Biochemistry 41, 3620-3627
23. Piechnick, R., Ritter, E., Hildebrand, P. W., Ernst, O. P., Scheerer, P., Hofmann, K. P., and Heck, M. (2012) Effect of channel mutations on the uptake and release of the retinal ligand in opsin Proc. Natl. Acad. Sci. U. S. A. 109, 5247-5252
24. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods Mol. Biol. Evol. 28, 2731-2739