-
1
-
-
84887496026
-
-
Washington DC: Integrated Ocean Drilling Program Management International
-
Bickle, M., Arculus, R., Barrett, P., Decanto, R., Camoin, G., Edwards, K., Fisher, A., Inagaki, F., Ravelo, C., Saffer, D., and Teagle, D. (2011). Illuminating Earth's Past, Present, and Future: International Ocean Discovery Program Science Plan 2013-2023. Washington DC: Integrated Ocean Drilling Program Management International.
-
(2011)
Illuminating Earth's Past, Present, and Future: International Ocean Discovery Program Science Plan
, pp. 2013-2023
-
-
Bickle, M.1
Arculus, R.2
Barrett, P.3
Decanto, R.4
Camoin, G.5
Edwards, K.6
Fisher, A.7
Inagaki, F.8
Ravelo, C.9
Saffer, D.10
Teagle, D.11
-
2
-
-
0001729540
-
A theoretical model for the optimal timing of diapause
-
Cohen, D. (1970). A theoretical model for the optimal timing of diapause. Am. Nat. 104, 389-400.
-
(1970)
Am. Nat.
, vol.104
, pp. 389-400
-
-
Cohen, D.1
-
3
-
-
0024507744
-
Phylo-genetic stains-ribosomal RNA-based probes for the identification of single cells
-
Delong, E. F., Wickham, G. S., and Pace, N. R. (1989). Phylo-genetic stains-ryibosomal RNA-based probes for the identification of single cells. Science 243, 1360-1363.
-
(1989)
Science
, vol.243
, pp. 1360-1363
-
-
Delong, E.F.1
Wickham, G.S.2
Pace, N.R.3
-
4
-
-
25444459890
-
Windows NET network distributed Basic Local Alignment Search Toolkit (W. ND-BLAST)
-
doi:10.1186/1471-2105-6-93
-
Dowd, S. E., Zaragoza, J., Rodriguez, J. R., Oliver, M. J., and Payton, P. R. (2005). Windows.NET network distributed Basic Local Alignment Search Toolkit (W.ND-BLAST). BMC Bioinformatics 6, 93. doi:10.1186/1471-2105-6-93
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 93
-
-
Dowd, S.E.1
Zaragoza, J.2
Rodriguez, J.R.3
Oliver, M.J.4
Payton, P.R.5
-
5
-
-
0031734090
-
Implications of rRNA operon copy number and ribosome content in the marine oligotrophic ultramicrobac-terium Sphingomonas sp. strain RB2256
-
Fegatella, F., Lim, J., Kjelleberg, S., and Cavicchioli, R. (1998). Implications of rRNA operon copy number and ribosome content in the marine oligotrophic ultramicrobac-terium Sphingomonas sp. strain RB2256. Appl. Environ. Microbiol. 64, 4433-4438.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4433-4438
-
-
Fegatella, F.1
Lim, J.2
Kjelleberg, S.3
Cavicchioli, R.4
-
6
-
-
53949101331
-
Prokaryotic biodiversity and activity in the deep subseafloor biosphere
-
Fry, J. C., Parkes, R. J., Cragg, B. A., Weightman, A. J., and Webster, G. (2008). Prokaryotic biodiversity and activity in the deep subseafloor biosphere. FEMS Microbiol. Ecol. 66, 181-196.
-
(2008)
FEMS Microbiol. Ecol.
, vol.66
, pp. 181-196
-
-
Fry, J.C.1
Parkes, R.J.2
Cragg, B.A.3
Weightman, A.J.4
Webster, G.5
-
7
-
-
33748353399
-
Annually reoccurring bacterial communities are predictable from ocean conditions
-
Fuhrman, J. A., Hewson, I., Schwal-bach, M. S., Steele, J. A., Brown, M. V., and Naeem, S. (2006). Annually reoccurring bacterial communities are predictable from ocean conditions. Proc. Natl. Acad. Sci. U.S.A. 103, 13104-13109.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 13104-13109
-
-
Fuhrman, J.A.1
Hewson, I.2
Schwal-bach, M.S.3
Steele, J.A.4
Brown, M.V.5
Naeem, S.6
-
8
-
-
0026409798
-
Isolation of molecular markers from specific chromosomal intervals using DNA pools from existing mapping populations
-
Giovannoni, J. J., Wing, R. A., Ganal, M. W., and Tanksley, S. D. (1991). Isolation of molecular markers from specific chromosomal intervals using DNA pools from existing mapping populations. Nucleic Acids Res. 19, 6553-6558.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 6553-6558
-
-
Giovannoni, J.J.1
Wing, R.A.2
Ganal, M.W.3
Tanksley, S.D.4
-
9
-
-
85056045969
-
Black box chimera check (B2C2): a windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets
-
Gontcharova, V., Youn, E., Wolcott, R. D., Hollister, E. B., Gentry, T. J., and Dowd, S. E. (2010). Black box chimera check (B2C2): a windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets. Open Microbiol. J. 4, 47-52.
-
(2010)
Open Microbiol. J.
, vol.4
, pp. 47-52
-
-
Gontcharova, V.1
Youn, E.2
Wolcott, R.D.3
Hollister, E.B.4
Gentry, T.J.5
Dowd, S.E.6
-
10
-
-
0027045138
-
Rapid, small-volume, flow-injection analysis for sigma CO2 and NH4+ in marine and fresh waters
-
Hall, P. O., and Aller, R. C. (1992). Rapid, small-volume, flow-injection analysis for sigma CO2 and NH4+ in marine and fresh waters. Limnol. Oceanogr. 37, 1113-1119.
-
(1992)
Limnol. Oceanogr.
, vol.37
, pp. 1113-1119
-
-
Hall, P.O.1
Aller, R.C.2
-
11
-
-
79953786183
-
Massive parallel 16S rRNA gene pyrose-quencing reveals highly diverse fecal bacterial and fungal communities in healthy dogs and cats
-
Handl, S., Dowd, S. E., Garcia-Mazcorro, J. F., Steiner, J. M., and Suchodolski, J. S. (2011). Massive parallel 16S rRNA gene pyrose-quencing reveals highly diverse fecal bacterial and fungal communities in healthy dogs and cats. FEMS Microbiol. Ecol. 76, 1-10.
-
(2011)
FEMS Microbiol. Ecol.
, vol.76
, pp. 1-10
-
-
Handl, S.1
Dowd, S.E.2
Garcia-Mazcorro, J.F.3
Steiner, J.M.4
Suchodolski, J.S.5
-
12
-
-
33748769754
-
Microbial community diversity associated with carbon and nitrogen cycling in permeable marine sediments
-
Hunter, E. M., Mills, H. J., and Kostka, J. E. (2006). Microbial community diversity associated with carbon and nitrogen cycling in permeable marine sediments. Appl. Environ. Microbiol. 72,5689-5701.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5689-5701
-
-
Hunter, E.M.1
Mills, H.J.2
Kostka, J.E.3
-
13
-
-
77950526876
-
Dormancy contributes to the maintenance of microbial diversity
-
Jones, S. E., and Lennon, J. T. (2010). Dormancy contributes to the maintenance of microbial diversity. Proc. Natl. Acad. Sci. U.S.A. 107, 5881-5886.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 5881-5886
-
-
Jones, S.E.1
Lennon, J.T.2
-
14
-
-
63849126616
-
Species-sorting may explain an apparent minimal effect of immigration on freshwater bacterial community dynamics
-
Jones, S. E., and McMahon, K. D. (2009). Species-sorting may explain an apparent minimal effect of immigration on freshwater bacterial community dynamics. Environ. Microbiol. 11,905-913.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 905-913
-
-
Jones, S.E.1
McMahon, K.D.2
-
15
-
-
81055130204
-
Deep sub-seafloor microbial cells on physiological standby
-
Jørgensen, B. B. (2011). Deep sub-seafloor microbial cells on physiological standby. Proc. Natl. Acad. Sci. U.S.A. 108, 18193-18194.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 18193-18194
-
-
Jørgensen, B.B.1
-
16
-
-
0027289343
-
Comparison of nucleic acid hybridization and fluorometry for measurement of RNA/DNA relationship with growth rate in a marine bacterium
-
Kerkhof, L. J., and Ward, B. B. (1993). Comparison of nucleic acid hybridization and fluorometry for measurement of RNA/DNA relationship with growth rate in a marine bacterium. Appl. Environ. Microbiol. 59, 1303-1307.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 1303-1307
-
-
Kerkhof, L.J.1
Ward, B.B.2
-
17
-
-
4244217675
-
Iron oxidation in sediment cores (site 1062) during six months of storage in the Ocean Drilling Program archive
-
eds L. D. Keigwin, D. Rio, G. D. Acton, and E. Arnold (College Station: Ocean Drilling Program)
-
König, I., Lougear, A., Bruns, P., Grützner, J., Trautwein, A. X., and Dullo,W.-C. (2000). Iron oxidation in sediment cores (site 1062) during six months of storage in the Ocean Drilling Program archive, " in Proceedings of the Ocean Drilling Program, Scientific Results, eds L. D. Keigwin, D. Rio, G. D. Acton, and E. Arnold (College Station: Ocean Drilling Program).
-
(2000)
Proceedings of the Ocean Drilling Program, Scientific Results
-
-
König, I.1
Lougear, A.2
Bruns, P.3
Grützner, J.4
Trautwein, A.X.5
Dullo, W.-C.6
-
18
-
-
36849026754
-
The identification and biogeochem-ical interpretation of fossil magne-totactic bacteria
-
Kopp,R. E.,andKirschvink, J. L. (2008). The identification and biogeochem-ical interpretation of fossil magne-totactic bacteria. Earth Sci. Rev. 86, 42-61.
-
(2008)
Earth Sci. Rev.
, vol.86
, pp. 42-61
-
-
Kopp, R.E.1
Kirschvink, J.L.2
-
19
-
-
0028991585
-
Dissolution and reduction of magnetite by bacteria
-
Kostka, J. E., and Nealson, K. H. (1995). Dissolution and reduction of magnetite by bacteria. Environ. Sci. Tech-nol. 29, 2535-2540.
-
(1995)
Environ. Sci. Tech-nol.
, vol.29
, pp. 2535-2540
-
-
Kostka, J.E.1
Nealson, K.H.2
-
20
-
-
0028082720
-
Single cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S ribosomal RNA targeted fluorescent probes
-
Lee, S. H., and Kemp, P. E (1994). Single cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S ribosomal RNA targeted fluorescent probes. Limnol. Oceanogr. 39, 869-879.
-
(1994)
Limnol. Oceanogr.
, vol.39
, pp. 869-879
-
-
Lee, S.H.1
Kemp, P.E.2
-
21
-
-
33845607284
-
Persister cells, dormancy and infectious disease
-
Lewis, K. (2007). Persister cells, dormancy and infectious disease. Nat. Rev. Microbiol. 5,48-56.
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 48-56
-
-
Lewis, K.1
-
22
-
-
77952228973
-
Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments
-
Lin, Y. S., Biddle, J. F., Lipp, J. S., Orcutt, B. N., Holler, T., Teske, A., and Hinrichs, K. U. (2010). Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments. Geomicrobiol. J. 27,261-272.
-
(2010)
Geomicrobiol. J.
, vol.27
, pp. 261-272
-
-
Lin, Y.S.1
Biddle, J.F.2
Lipp, J.S.3
Orcutt, B.N.4
Holler, T.5
Teske, A.6
Hinrichs, K.U.7
-
23
-
-
47749094350
-
Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico
-
Mills, H. J., Hunter, E., Humphrys, M., Kerkhof, L., Mcguinness, L. M., Huettel, M., and Kostka, J. E. (2008). Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico. Appl. Environ. Microbiol. 74, 4440-4453.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 4440-4453
-
-
Mills, H.J.1
Hunter, E.2
Humphrys, M.3
Kerkhof, L.4
Mcguinness, L.M.5
Huettel, M.6
Kostka, J.E.7
-
24
-
-
0033140436
-
Identification of the meta-bolically active members of a bacterial community in a polychlori-nated biphenyl-polluted moorland soil
-
Nogales, B., Moore, E. R. B., Abraham, W. R., and Timmis, K. N. (1999). Identification of the meta-bolically active members of a bacterial community in a polychlori-nated biphenyl-polluted moorland soil. Environ. Microbiol. 1,199-212.
-
(1999)
Environ. Microbiol.
, vol.1
, pp. 199-212
-
-
Nogales, B.1
Moore, E.R.B.2
Abraham, W.R.3
Timmis, K.N.4
-
25
-
-
79958053971
-
Microbial ecology of the dark ocean above, at, and below the seafloor
-
Orcutt, B. N., Sylvan, J. B., Knab, N. J., and Edwards, K. J. (2011). Microbial ecology of the dark ocean above, at, and below the seafloor. Microbiol. Mol. Biol. Rev. 75, 361-422.
-
(2011)
Microbiol. Mol. Biol. Rev.
, vol.75
, pp. 361-422
-
-
Orcutt, B.N.1
Sylvan, J.B.2
Knab, N.J.3
Edwards, K.J.4
-
26
-
-
84875621472
-
-
Geomicrobiology (in press)
-
Reese, B. K., Mills, H. J., Dowd, S., and Morse, J. W. (2012). Benthic biogeo-chemistry of microbial iron and sul-fate reduction in the Gulf of Mexico hypoxic zone. Geomicrobiology (in press).
-
(2012)
Benthic biogeo-chemistry of microbial iron and sul-fate reduction in the Gulf of Mexico hypoxic zone
-
-
Reese, B.K.1
Mills, H.J.2
Dowd, S.3
Morse, J.W.4
-
27
-
-
0028028182
-
A place for DNA-DNA reassociation and 16S ribosomal RNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt, E., and Goebel, B. M. (1994). A place for DNA-DNA reassociation and 16S ribosomal RNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44, 846-849.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
28
-
-
13244296957
-
Marini-lactibacillus piezotolerans sp nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor ediment of the Nankai Trough
-
Toffin, L., Zink, K., Kato, C., Pignet, P., Bidault, A., Bienvenu, N., Birrien, J. L., and Prieur, D. (2005). Marini-lactibacillus piezotolerans sp nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor ediment of the Nankai Trough. Int. J. Syst. Evol. Microbiol. 55, 345-351.
-
(2005)
Int. J. Syst. Evol. Microbiol.
, vol.55
, pp. 345-351
-
-
Toffin, L.1
Zink, K.2
Kato, C.3
Pignet, P.4
Bidault, A.5
Bienvenu, N.6
Birrien, J.L.7
Prieur, D.8
-
29
-
-
83455229713
-
IODP Expedition 325 Great Barrier Reefs reveals past sea-level climate and environmental changes since the last ice age
-
Yusuke, Y., Webster, J. M., Cotterill, C., Braga, J. C., Jovane, J., Mills, H. J., Morgan, S., Suzuki, A., and Scientists, T. I. E. (2011). IODP Expedition 325: Great Barrier Reefs reveals past sea-level, climate and environmental changes since the last ice age. Sci. Drilling 12, 32-45.
-
(2011)
Sci. Drilling
, vol.12
, pp. 32-45
-
-
Yusuke, Y.1
Webster, J.M.2
Cotterill, C.3
Braga, J.C.4
Jovane, J.5
Mills, H.J.6
Morgan, S.7
Suzuki, A.8
Scientists, T.I.E.9
-
30
-
-
0032433868
-
Bacterial reduction of crystalline Fe3+ oxides in single phase suspensions and subsurface materials
-
Zachara, J. M., Fredrickson, J. K., Li, S. M., Kennedy, D. W., Smith, S. C., and Gassman, P. L. (1998). Bacterial reduction of crystalline Fe3+ oxides in single phase suspensions and subsurface materials. Am. Mineral. 83, 1426-1443.
-
(1998)
Am. Mineral.
, vol.83
, pp. 1426-1443
-
-
Zachara, J.M.1
Fredrickson, J.K.2
Li, S.M.3
Kennedy, D.W.4
Smith, S.C.5
Gassman, P.L.6
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