Medical (visual) information retrieval

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 7757 LNCS, Issue , 2013, Pages 155-166

  Müller, Henning ^a,b  

^a UNIVERSITY OF APPLIED SCIENCES WESTERN SWITZERLAND   (Switzerland)

^b GENEVA UNIVERSITY HOSPITALS   (Switzerland)

Author keywords

content based image retrieval; Medical information retrieval; medical visual information retrieval

Indexed keywords

CONTENT BASED IMAGE RETRIEVAL; MEDICAL VISUAL INFORMATION; RESEARCH DOMAINS; SYSTEMATIC REVIEW;

BIOINFORMATICS; CONTENT BASED RETRIEVAL; INFORMATION SYSTEMS; RESEARCH LABORATORIES;

INFORMATION RETRIEVAL;

EID: 84873848203     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-36415-0_10     Document Type: Conference Paper

References (50)

1. Simel, D., Drummond, R.: The rational clinical examination: evidence-based clinical diagnosis. McGraw-Hill (August 2008)
2. Bui, A.A.T., Taira, R.K., Dionision, J.D.N., Aberle, D.R., El-Saden, S., Kangarloo, H.: Evidence-based radiology. Academic Radiology 9(6), 662-669 (2002)
3. Hunter, L., Cohen, K.B.: Biomedical language processing: What's beyond pubmed? Molecular Cell 21(5), 589-594 (2006)
4. Riding the wave: How europe can gain from the rising tide of scientific data. Submission to the European Comission (October 2010), http://cordis.europa. eu/fp7/ict/e-infrastructure/docs/hlg-sdi-report.pdf
5. Zhang, C., De Sterck, H., Aboulnaga, A., Djambazian, H., Sladek, R.: Case Study of Scientific Data Processing on a Cloud Using Hadoop. In: Mewhort, D.J.K., Cann, N.M., Slater, G.W., Naughton, T.J. (eds.) HPCS 2009. LNCS, vol. 5976, pp. 400-415. Springer, Heidelberg (2010)
6. Safran, C., Bloomrosen, M., Hammond, W.E., Labkoff, S., Markel-Fox, S., Tang, P.C., Detmer, D.E.: Toward a national framework for the secondary use of health data: An american medical informatics association white paper. MIM 14, 1-9 (2007)
7. Elger, B., Iavindrasana, J., Iacono, L.L., Müller, H., Roduit, N., Summers, P., Wright, J.: Strategies for health data exchange for secondary, cross-institutional clinical research. Computer Methods and Programs in Biomedicine 99(3), 230-251 (2010)
8. Hersh, W.: Information Retrieval - A health and Biomedical Perspective, 2nd edn. Springer (2003)
9. Hersh, W., Jensen, J., Müller, H., Gorman, P., Ruch, P.: A qualitative task analysis for developing an image retrieval test collection. In: ImageCLEF/MUSCLE Workshop on Image Retrieval Evaluation, Vienna, Austria, pp. 11-16 (2005)
10. Hoogendam, A., de Vries Robbé, P.F., Overbeke, A.J.: Answers to questions posed during daily patient care are more likely to be answered by uptodate than pubmed. Journal of Medical Internet Research 10(4) (2008)
11. Hersh, W.R., Hickam, D.H.: How well do physicians use electronic information retrieval systems? Journal of the American Medical Association 280(15), 1347-1352 (1998)
12. Müller, H., Despont-Gros, C., Hersh, W., Jensen, J., Lovis, C., Geissbuhler, A.: Health care professionals' image use and search behaviour. In: Proceedings of the Medical Informatics Europe Conference (MIE 2006), pp. 24-32. IOS Press, Studies in Health Technology and Informatics, Maastricht, The Netherlands (2006)
13. Glasgow, J., Jurisica, I.: Integration of case-based and image-based reasoning. In: AAAI Workshop on Case-Based Reasoning Integrations, pp. 67-74. AAAI Press, Menlo Park (1998)
14. Kahn Jr., C., Thao, C.: Goldminer: A radiology image search engine. American Journal of Roentgenology 188, 1475-1478 (2008)
15. Ruch, P., Baud, R., Geissbuhler, A.: Using lexical disambiguation and named-entity recognition to improve spelling correction in the electronique patient record. AIM 29, 169-184 (2003)
16. Franz, P., Zaiss, A., Hahn, U., Schulz, S., Klar, R.: Automated coding of diagnoses - three methods compared. In: Proceedings of the Annual Symposium of the American Society for Medical Informatics (AMIA), Los Angeles, CA, USA (November 2000)
17. Gobeill, J., Theodoro, D., Patsche, E., Ruch, P.: Taking benefit of query and document expansion using MeSH descriptors in medical ImageCLEF 2009. Working Notes of the 2009 CLEF Workshop, Corfu, Greece (September 2009)
18. Lanlotz, C.P.: Radlex: A new method for indexing online educational materials. Radiographics 26, 1595-1597 (2006)
19. Müller, H., Schumacher, M., Godel, D., Khaled, O.A., Mooser, F., Ding, S.: Medicoordination: A practical approach to interoperability in the swiss health system. In: The Medical Informatics Europe Conference (MIE 2009), Sarajevo, Bosnia- Herzegovina, pp. 210-214 (August 2009)
20. Ide, N.C., Loane, R.F., Demner-Fushman, D.: Application of information technology: Essie: A concept-based search engine for structured biomedical text. Journal of the American Medical Informatics Association 14(3), 253-263 (2007)
21. Demner-Fushman, D., Antani, S., Siadat, M.R., Soltanian-Zadeh, H., Fotouhi, F., Elisevich, K.: Automatically finding images for clinical decision support. In: Proceedings of the Seventh IEEE International Conference on DataMiningWorkshops, ICDMW 2007, pp. 139-144. IEEE Computer Society, Washington, DC (2007)
22. Salton, G., Buckley, C.: Term weighting approaches in automatic text retrieval. IPM 24(5), 513-523 (1988)
23. van Rijsbergen, C.J.: Information Retrieval. Prentice Hall, Englewood Cliffs (1979)
24. Müller, H., Michoux, N., Bandon, D., Geissbuhler, A.: A review of content-based image retrieval systems in medicine-clinical benefits and future directions. International Journal of Medical Informatics 73(1), 1-23 (2004)
25. Akgül, C., Rubin, D., Napel, S., Beaulieu, C., Greenspan, H., Acar, B.: Content-based image retrieval in radiology: Current status and future directions. Journal of Digital Imaging 24(2), 208-222 (2011)
26. Tang, L.H.Y., Hanka, R., Ip, H.H.S.: A review of intelligent content-based indexing and browsing of medical images. HIJ 5, 40-49 (1999)
27. Lowe, H.J., Antipov, I., Hersh, W., Smith, C.A.: Towards knowledge-based retrieval of medical images. The role of semantic indexing, image content representation and knowledge-based retrieval. In: Proceedings of the Annual Symposium of the American Society for Medical Informatics (AMIA), Nashville, TN, USA, pp. 882-886 (October 1998)
28. Tagare, H.D., Jaffe, C., Duncan, J.: Medical image databases: A content-based retrieval approach. Journal of the American Medical Informatics Association 4(3), 184-198 (1997)
29. Dahmen, J., Theiner, T., Keysers, D., Ney, H., Lehmann, T., Wein, B.: Classification of radiographs in the 'image retrieval in medical applications' - system (IRMA). In: 6th International RIAO Conference on Content-Based Multimedia Information Access, Paris, France, pp. 551-566 (April 2000)
30. Smeulders, A.W.M., Worring, M., Santini, S., Gupta, A., Jain, R.: Content-based image retrieval at the end of the early years. IEEE Transactions on Pattern Analysis and Machine Intelligence 22(12), 1349-1380 (2000)
31. Datta, R., Joshi, D., Li, J., Wang, J.Z.: Image retrieval: Ideas, influences, and trends of the new age. ACM Computing Surveys 40(2), 1-60 (2008)
32. Jörgensen, C.: Retrieving the unretrievable in electronic imaging systems: emotions, themes and stories. In: Rogowitz, B., Pappas, T.N. (eds.) Human Vision and Electronic Imaging IV, San Jose, California, USA, January 23-29. SPIE Proc., vol. 3644. SPIE Photonics West Conference (1999)
33. Aisen, A.M., Broderick, L.S., Winer-Muram, H., Brodley, C.E., Kak, A.C., Pavlopoulou, C., Dy, J., Shyu, C.R., Marchiori, A.: Automated storage and retrieval of thin-section CT images to assist diagnosis: System description and preliminary assessment. Radiology 228(1), 265-270 (2003)
34. Depeursinge, A., Sage, D., Hidki, A., Platon, A., Poletti, P.A., Unser, M., Müller, H.: Lung tissue classification using Wavelet frames. In: 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2007, Lyon, France, pp. 6259-6262. IEEE Computer Society (2007)
35. Hsu, W., Antani, S., Long, L.R., Neve, L., Thoma, G.R.: Spirs: A web-based image retrieval system for large biomedical databases. International Journal of Medical Informatics 78(suppl. 1), S13-S24 (2009);
36. MedInfo 2007
37. Costa, M.J., Tsymbal, A., Hammon, M., Cavallaro, A., Sühling, M., Seifert, S., Comaniciu, D.: A Discriminative Distance Learning-Based CBIR Framework for Characterization of Indeterminate Liver Lesions. In: Müller, H., Greenspan, H., Syeda-Mahmood, T. (eds.) MCBR-CDS 2011. LNCS, vol. 7075, pp. 92-104. Springer, Heidelberg (2012)
38. Depeursinge, A., Fischer, B., Müller, H., Deserno, T.M.: Prototypes for content-based image retrieval in clinical practice. The Open Medical Informatics Journal 5, 58-72 (2011)
39. Clough, P., Müller, H., Sanderson, M.: The CLEF 2004 Cross-Language Image Retrieval Track. In: Peters, C., Clough, P., Gonzalo, J., Jones, G.J.F., Kluck, M., Magnini, B. (eds.) CLEF 2004. LNCS, vol. 3491, pp. 597-613. Springer, Heidelberg (2005)
40. Hersh, W., Müller, H., Kalpathy-Cramer, J., Kim, E., Zhou, X.: The consolidated ImageCLEFmed medical image retrieval task test collection. Journal of Digital Imaging 22(6), 648-655 (2009)
41. Müller, H., Clough, P., Deselaers, T., Caputo, B. (eds.): ImageCLEF - Experimental Evaluation in Visual Information Retrieval. The Springer International Series on Information Retrieval, vol. 32. Springer, Heidelberg (2010)
42. Kalpathy-Cramer, J., Müller, H., Bedrick, S., Eggel, I., García Seco de Herrera, A., Tsikrika, T.: The CLEF 2011 medical image retrieval and classification tasks. Working Notes of CLEF 2011 (Cross Language Evaluation Forum) (September 2011)
43. Dean, J., Ghemawat, S.: Mapreduce: simplified data processing on large clusters. In: Proceedings of the 6th Conference on Symposium on Opearting Systems Design & Implementation, OSDI 2004, vol. 6, p. 10. USENIX Association, Berkeley (2004)
44. Markonis, D., Holzer, M., Dung, S., Vargas, A., Langs, G., Kriewel, S., Müller, H.: A survey on visual information search behavior and requirements of radiologists. Methods of Information in Medicine (forthcoming 2012)
45. Quellec, G., Lamard, M., Cazuguel, G., Roux, C., Cochener, B.: Case retrieval in medical databases by fusing heterogeneous information. IEEE Transactions on Medical Imaging 30(1), 108-118 (2011)
46. Depeursinge, A., Vargas, A., Platon, A., Geissbuhler, A., Poletti, P.-A., Müller, H.: 3D Case-Based Retrieval for Interstitial Lung Diseases. In: Caputo, B., Müller, H., Syeda-Mahmood, T., Duncan, J.S., Wang, F., Kalpathy-Cramer, J. (eds.) MCBRCDS 2009. LNCS, vol. 5853, pp. 39-48. Springer, Heidelberg (2010)
47. Zhou, X., Depeursinge, A., Stern, R., Lovis, C., Müller, H.: Case-based visual retrieval of fractures. International Journal of Computer Assisted Radiology and Surgery 5(suppl. 1), 11548/S162-11548/S163 (2010)
48. Depeursinge, A., Zrimec, T., Busayarat, S., Müller, H.: 3D lung image retrieval using localized features. In: Medical Imaging 2011: Computer-Aided Diagnosis. SPIE, vol. 7963, p. 79632E (2011)
49. Funkhouser, T., Min, P., Kazhdan, M., Chen, J., Halderman, A., Dobkin, D., Jacobs, D.: A search engine for 3d models. ACM Transactions on Graphics 22(1), 83-105 (2003)
50. Johnson, T.R.C., Krauß, B., Sedlmair, M., Grasruck, M., Bruder, H., Morhard, D., Fink, C., Weckbach, S., Lenhard, M., Schmidt, B., Flohr, T., Reiser, M.F., Becker, C.R.: Material differentiation by dual energy CT: initial experience. European Radiology 17(6), 1510-1517 (2007)