-
1
-
-
33747343208
-
Methicillin-resistant S-aureus infections among patients in the emergency department
-
E.M.I.N.S. Grp
-
G.J. Moran, A. Krishnadasan, R.J. Gorwitz, G.E. Fosheim, L.K. McDougal, R.B. Carey, D.A. Talan E.M.I.N.S. Grp Methicillin-resistant S-aureus infections among patients in the emergency department N. Engl. J. Med. 355 2006 666 674
-
(2006)
N. Engl. J. Med.
, vol.355
, pp. 666-674
-
-
Moran, G.J.1
Krishnadasan, A.2
Gorwitz, R.J.3
Fosheim, G.E.4
McDougal, L.K.5
Carey, R.B.6
Talan, D.A.7
-
2
-
-
79959764370
-
Comparison of Staphylococcus aureus from skin and soft-tissue infections in US emergency department patients, 2004 and 2008
-
E.M.I.N.S. Grp
-
D.A. Talan, A. Krishnadasan, R.J. Gorwitz, G.E. Fosheim, B. Limbago, V. Albrecht, G.J. Moran E.M.I.N.S. Grp Comparison of Staphylococcus aureus from skin and soft-tissue infections in US emergency department patients, 2004 and 2008 Clin. Infect. Dis. 53 2011 144 149
-
(2011)
Clin. Infect. Dis.
, vol.53
, pp. 144-149
-
-
Talan, D.A.1
Krishnadasan, A.2
Gorwitz, R.J.3
Fosheim, G.E.4
Limbago, B.5
Albrecht, V.6
Moran, G.J.7
-
3
-
-
0037371597
-
Mechanisms of antimicrobial peptide action and resistance
-
M.R. Yeaman, and N.Y. Yount Mechanisms of antimicrobial peptide action and resistance Pharmacol. Rev. 55 2003 27 55
-
(2003)
Pharmacol. Rev.
, vol.55
, pp. 27-55
-
-
Yeaman, M.R.1
Yount, N.Y.2
-
4
-
-
36248932202
-
Computer simulation of antimicrobial peptides
-
E. Matyus, C. Kandt, and D.P. Tieleman Computer simulation of antimicrobial peptides Curr. Med. Chem. 14 2007 2789 2798
-
(2007)
Curr. Med. Chem.
, vol.14
, pp. 2789-2798
-
-
Matyus, E.1
Kandt, C.2
Tieleman, D.P.3
-
6
-
-
68749115077
-
Rationalizing the membrane interactions of cationic amphipathic antimicrobial peptides by their molecular shape
-
B. Burkhard Rationalizing the membrane interactions of cationic amphipathic antimicrobial peptides by their molecular shape Curr. Opin. Colloid Interface Sci. 14 2009 349 355
-
(2009)
Curr. Opin. Colloid Interface Sci.
, vol.14
, pp. 349-355
-
-
Burkhard, B.1
-
7
-
-
77958085274
-
Describing the mechanism of antimicrobial peptide action with the interfacial activity model
-
W.C. Wimley Describing the mechanism of antimicrobial peptide action with the interfacial activity model ACS Chem. Biol. 5 2010 905 917
-
(2010)
ACS Chem. Biol.
, vol.5
, pp. 905-917
-
-
Wimley, W.C.1
-
8
-
-
0032717048
-
Diversity of antimicrobial peptides and their mechanisms of action
-
R.M. Epand, and H.J. Vogel Diversity of antimicrobial peptides and their mechanisms of action Biochim. Biophys. Acta Biomembr. 1462 1999 11 28
-
(1999)
Biochim. Biophys. Acta Biomembr.
, vol.1462
, pp. 11-28
-
-
Epand, R.M.1
Vogel, H.J.2
-
9
-
-
79951556373
-
Multivalent antimicrobial peptides as therapeutics: Design principles and structural diversities
-
S. Liu, L. Zhou, R. Lakshminarayanan, and R. Beuerman Multivalent antimicrobial peptides as therapeutics: design principles and structural diversities Int. J. Pept. Res. Ther. 16 2010 199 213
-
(2010)
Int. J. Pept. Res. Ther.
, vol.16
, pp. 199-213
-
-
Liu, S.1
Zhou, L.2
Lakshminarayanan, R.3
Beuerman, R.4
-
10
-
-
78650519083
-
Antimicrobial and cell-penetrating peptides: Structure, assembly and mechanisms of membrane lysis via atomistic and coarse-grained molecular dynamic simulations
-
P.J. Bond, and S. Khalid Antimicrobial and cell-penetrating peptides: structure, assembly and mechanisms of membrane lysis via atomistic and coarse-grained molecular dynamic simulations Protein Pept. Lett. 17 2010 1313 1327
-
(2010)
Protein Pept. Lett.
, vol.17
, pp. 1313-1327
-
-
Bond, P.J.1
Khalid, S.2
-
11
-
-
78650293305
-
Targeting bacterial membrane function: An underexploited mechanism for treating persistent infections
-
J.G. Hurdle, A.J. O'Neill, I. Chopra, and R.E. Lee Targeting bacterial membrane function: an underexploited mechanism for treating persistent infections Nat. Rev. Microbiol. 9 2011 62 75
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 62-75
-
-
Hurdle, J.G.1
O'Neill, A.J.2
Chopra, I.3
Lee, R.E.4
-
12
-
-
0029873933
-
Structure and orientation of the mammalian antibacterial peptide cecropin P1 within phospholipid membranes
-
E. Gazit, I.R. Miller, P.C. Biggin, M.S.P. Sansom, and Y. Shai Structure and orientation of the mammalian antibacterial peptide cecropin P1 within phospholipid membranes J. Mol. Biol. 258 1996 860 870
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 860-870
-
-
Gazit, E.1
Miller, I.R.2
Biggin, P.C.3
Sansom, M.S.P.4
Shai, Y.5
-
13
-
-
0032774790
-
Membrane channel formation by antimicrobial protegrins
-
Y. Sokolov, T. Mirzabekov, D.W. Martin, R.I. Lehrer, and B.L. Kagan Membrane channel formation by antimicrobial protegrins Biochim. Biophys. Acta Biomembr. 1420 1999 23 29
-
(1999)
Biochim. Biophys. Acta Biomembr.
, vol.1420
, pp. 23-29
-
-
Sokolov, Y.1
Mirzabekov, T.2
Martin, D.W.3
Lehrer, R.I.4
Kagan, B.L.5
-
14
-
-
42449116949
-
Mechanism and kinetics of pore formation in membranes by water-soluble amphipathic peptides
-
M.T. Lee, W.C. Hung, F.Y. Chen, and H.W. Huang Mechanism and kinetics of pore formation in membranes by water-soluble amphipathic peptides Proc. Natl. Acad. Sci. U.S.A. 105 2008 5087 5092
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 5087-5092
-
-
Lee, M.T.1
Hung, W.C.2
Chen, F.Y.3
Huang, H.W.4
-
16
-
-
84857989917
-
Charge distribution and imperfect amphipathicity affect pore formation by antimicrobial peptides
-
M. Mihajlovic, and T. Lazaridis Charge distribution and imperfect amphipathicity affect pore formation by antimicrobial peptides Biochim. Biophys. Acta Biomembr. 1818 2012 1274 1283
-
(2012)
Biochim. Biophys. Acta Biomembr.
, vol.1818
, pp. 1274-1283
-
-
Mihajlovic, M.1
Lazaridis, T.2
-
17
-
-
49649110753
-
Probing structure-activity relationships in bactericidal peptide βpep-25
-
R.P.M. Dings, J.R. Haseman, and K.H. Mayo Probing structure-activity relationships in bactericidal peptide βpep-25 Biochem. J. 414 2008 143 150
-
(2008)
Biochem. J.
, vol.414
, pp. 143-150
-
-
Dings, R.P.M.1
Haseman, J.R.2
Mayo, K.H.3
-
18
-
-
80051743947
-
Peptide-induced asymmetric distribution of charged lipids in a vesicle bilayer revealed by small-angle neutron scattering
-
S. Qian, and W.T. Heller Peptide-induced asymmetric distribution of charged lipids in a vesicle bilayer revealed by small-angle neutron scattering J. Phys. Chem. B 115 2011 9831 9837
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 9831-9837
-
-
Qian, S.1
Heller, W.T.2
-
19
-
-
84864556578
-
Progressive Structuring of a Branched Antimicrobial Peptide on the Path to the Inner Membrane Target
-
Y. Bai, S. Liu, R. Lakshminarayanan, P. Sarawathi, C. Tang, D. Ho, C. Verma, R.W. Beuerman, and K. Pervushin Progressive Structuring of a Branched Antimicrobial Peptide on the Path to the Inner Membrane Target J. Biol. Chem. 287 2012 26606 26617
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 26606-26617
-
-
Bai, Y.1
Liu, S.2
Lakshminarayanan, R.3
Sarawathi, P.4
Tang, C.5
Ho, D.6
Verma, C.7
Beuerman, R.W.8
Pervushin, K.9
-
20
-
-
58549115686
-
Mechanism of a prototypical synthetic membrane-active antimicrobial: Efficient hole-punching via interaction with negative intrinsic curvature lipids
-
L. Yang, V.D. Gordon, D.R. Trinkle, N.W. Schmidt, M.A. Davis, C. DeVries, A. Som, J.E. Cronan, G.N. Tew, and G.C.L. Wong Mechanism of a prototypical synthetic membrane-active antimicrobial: efficient hole-punching via interaction with negative intrinsic curvature lipids Proc. Natl. Acad. Sci. 105 2008 20595 20600
-
(2008)
Proc. Natl. Acad. Sci.
, vol.105
, pp. 20595-20600
-
-
Yang, L.1
Gordon, V.D.2
Trinkle, D.R.3
Schmidt, N.W.4
Davis, M.A.5
Devries, C.6
Som, A.7
Cronan, J.E.8
Tew, G.N.9
Wong, G.C.L.10
-
21
-
-
84861797429
-
Antimicrobial selectivity based on zwitterionic lipids and underlying balance of interactions
-
C.I.E. von Deuster, and V. Knecht Antimicrobial selectivity based on zwitterionic lipids and underlying balance of interactions Biochim. Biophys. Acta Biomembr. 1818 2012 2192 2201
-
(2012)
Biochim. Biophys. Acta Biomembr.
, vol.1818
, pp. 2192-2201
-
-
Von Deuster, C.I.E.1
Knecht, V.2
-
22
-
-
78751585357
-
The structural parameters for antimicrobial activity, human epithelial cell cytotoxicity and killing mechanism of synthetic monomer and dimer analogues derived from hBD3 C-terminal region
-
L. Zhou, S.P. Liu, L.Y. Chen, J. Li, L.B. Ong, L. Guo, T. Wohland, C.C. Tang, R. Lakshminarayanan, J. Mavinahalli, C. Verma, and R.W. Beuerman The structural parameters for antimicrobial activity, human epithelial cell cytotoxicity and killing mechanism of synthetic monomer and dimer analogues derived from hBD3 C-terminal region Amino Acids 40 2011 123 133
-
(2011)
Amino Acids
, vol.40
, pp. 123-133
-
-
Zhou, L.1
Liu, S.P.2
Chen, L.Y.3
Li, J.4
Ong, L.B.5
Guo, L.6
Wohland, T.7
Tang, C.C.8
Lakshminarayanan, R.9
Mavinahalli, J.10
Verma, C.11
Beuerman, R.W.12
-
23
-
-
0141799911
-
Defensins: Antimicrobial peptides of innate immunity
-
T. Ganz Defensins: antimicrobial peptides of innate immunity Nat. Rev. Immunol. 3 2003 710 720
-
(2003)
Nat. Rev. Immunol.
, vol.3
, pp. 710-720
-
-
Ganz, T.1
-
24
-
-
43149121350
-
Does arginine remain protonated in the lipid membrane? Insights from microscopic pKa calculations
-
J. Yoo, and Q. Cui Does arginine remain protonated in the lipid membrane? Insights from microscopic pKa calculations Biophys. J. 94 2008 L61 L63
-
(2008)
Biophys. J.
, vol.94
-
-
Yoo, J.1
Cui, Q.2
-
25
-
-
34247240560
-
Interaction of poly(l-lysines) with negatively charged membranes: An FT-IR and DSC study
-
C. Schwieger, and A. Blume Interaction of poly(l-lysines) with negatively charged membranes: an FT-IR and DSC study Eur. Biophys. J. 36 2007 437 450
-
(2007)
Eur. Biophys. J.
, vol.36
, pp. 437-450
-
-
Schwieger, C.1
Blume, A.2
-
26
-
-
21244475101
-
Phosphatidylethanolamine-phosphatidylglycerol bilayer as a model of the inner bacterial membrane
-
K. Murzyn, T. Róg, and M. Pasenkiewicz-Gierula Phosphatidylethanolamine-phosphatidylglycerol bilayer as a model of the inner bacterial membrane Biophys. J. 88 2005 1091 1103
-
(2005)
Biophys. J.
, vol.88
, pp. 1091-1103
-
-
Murzyn, K.1
Róg, T.2
Pasenkiewicz-Gierula, M.3
-
27
-
-
44449167975
-
Role of phosphatidylglycerols in the stability of bacterial membranes
-
W. Zhao, T. Róg, A.A. Gurtovenko, I. Vattulainen, and M. Karttunen Role of phosphatidylglycerols in the stability of bacterial membranes Biochimie 90 2008 930 938
-
(2008)
Biochimie
, vol.90
, pp. 930-938
-
-
Zhao, W.1
Róg, T.2
Gurtovenko, A.A.3
Vattulainen, I.4
Karttunen, M.5
-
28
-
-
84870910821
-
Molecular dynamics simulations of a new branched antimicrobial peptide: A comparison of force fields
-
J. Li, R. Lakshminarayanan, Y. Bai, S. Liu, L. Zhou, K. Pervushin, C. Verma, and R.W. Beuerman Molecular dynamics simulations of a new branched antimicrobial peptide: a comparison of force fields J. Chem. Phys. 137 2012 215101
-
(2012)
J. Chem. Phys.
, vol.137
, pp. 215101
-
-
Li, J.1
Lakshminarayanan, R.2
Bai, Y.3
Liu, S.4
Zhou, L.5
Pervushin, K.6
Verma, C.7
Beuerman, R.W.8
-
29
-
-
56049100497
-
Coarse-grained simulations of the membrane-active antimicrobial peptide maculatin 1.1
-
P.J. Bond, D.L. Parton, J.F. Clark, and M.S.P. Sansom Coarse-grained simulations of the membrane-active antimicrobial peptide maculatin 1.1 Biophys. J. 95 2008 3802 3815
-
(2008)
Biophys. J.
, vol.95
, pp. 3802-3815
-
-
Bond, P.J.1
Parton, D.L.2
Clark, J.F.3
Sansom, M.S.P.4
-
30
-
-
67650076379
-
Incorporation of antimicrobial peptides into membranes: A combined liquid-state NMR and molecular dynamics study of alamethicin in DMPC/DHPC bicelles
-
J. Dittmer, L. Thøgersen, J. Underhaug, K. Bertelsen, T. Vosegaard, J.M. Pedersen, B. Schiøtt, E. Tajkhorshid, T. Skrydstrup, and N.C. Nielsen Incorporation of antimicrobial peptides into membranes: a combined liquid-state NMR and molecular dynamics study of alamethicin in DMPC/DHPC bicelles J. Phys. Chem. B 113 2009 6928 6937
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 6928-6937
-
-
Dittmer, J.1
Thøgersen, L.2
Underhaug, J.3
Bertelsen, K.4
Vosegaard, T.5
Pedersen, J.M.6
Schiøtt, B.7
Tajkhorshid, E.8
Skrydstrup, T.9
Nielsen, N.C.10
-
31
-
-
61549084018
-
2 (1 42) peptide and phospholipid bilayers: A molecular dynamics study
-
2 (1 42) peptide and phospholipid bilayers: a molecular dynamics study Biophys. J. 96 2009 785 797
-
(2009)
Biophys. J.
, vol.96
, pp. 785-797
-
-
Davis, C.H.1
Berkowitz, M.L.2
-
32
-
-
77954256616
-
G-membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation
-
M.G. Wolf, M. Hoefling, C. Aponte-Santamaría, H. Grubmüller, and G. Groenhof g-membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation J. Comput. Chem. 31 2010 2169 2174
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 2169-2174
-
-
Wolf, M.G.1
Hoefling, M.2
Aponte-Santamaría, C.3
Grubmüller, H.4
Groenhof, G.5
-
33
-
-
77953377650
-
Update of the CHARMM all-atom additive force field for lipids: Validation on six lipid types
-
J.B. Klauda, R.M. Venable, J.A. Freites, J.W. O'Connor, D.J. Tobias, C. Mondragon-Ramirez, I. Vorobyov, A.D. MacKerell, and R.W. Pastor Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types J. Phys. Chem. B 114 2010 7830 7843
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 7830-7843
-
-
Klauda, J.B.1
Venable, R.M.2
Freites, J.A.3
O'Connor, J.W.4
Tobias, D.J.5
Mondragon-Ramirez, C.6
Vorobyov, I.7
MacKerell, A.D.8
Pastor, R.W.9
-
35
-
-
33645961739
-
A smooth particle mesh Ewald method
-
U. Essmann, L. Perera, M.L. Berkowitz, T. Darden, H. Lee, and L.G. Pedersen A smooth particle mesh Ewald method J. Chem. Phys. 103 1995 8577 8593
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
36
-
-
84926811618
-
Constant pressure molecular dynamics for molecular systems
-
S. Nosé, and M.L. Klein Constant pressure molecular dynamics for molecular systems Mol. Phys. 50 1983 1055 1076
-
(1983)
Mol. Phys.
, vol.50
, pp. 1055-1076
-
-
Nosé, S.1
Klein, M.L.2
-
37
-
-
77950106854
-
Implementation of the CHARMM force field in GROMACS: Analysis of protein stability effects from correction maps, virtual interaction sites, and water models
-
P. Bjelkmar, P. Larsson, M.A. Cuendet, B. Hess, and E. Lindahl Implementation of the CHARMM force field in GROMACS: analysis of protein stability effects from correction maps, virtual interaction sites, and water models J. Chem. Theory Comput. 6 2010 459 466
-
(2010)
J. Chem. Theory Comput.
, vol.6
, pp. 459-466
-
-
Bjelkmar, P.1
Larsson, P.2
Cuendet, M.A.3
Hess, B.4
Lindahl, E.5
-
38
-
-
33748573642
-
The influence of geometry, surface character, and flexibility on the permeation of ions and water through biological pores
-
O. Beckstein, and M.S.P. Sansom The influence of geometry, surface character, and flexibility on the permeation of ions and water through biological pores Phys. Biol. 1 2004 42
-
(2004)
Phys. Biol.
, vol.1
, pp. 42
-
-
Beckstein, O.1
Sansom, M.S.P.2
-
39
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
N.A. Baker, D. Sept, S. Joseph, M.J. Holst, and J.A. McCammon Electrostatics of nanosystems: application to microtubules and the ribosome Proc. Natl. Acad. Sci. 98 2001 10037 10041
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
40
-
-
34547559704
-
PDB2PQR: Expanding and upgrading automated preparation of biomolecular structures for molecular simulations
-
T.J. Dolinsky, P. Czodrowski, H. Li, J.E. Nielsen, J.H. Jensen, G. Klebe, and N.A. Baker PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations Nucleic Acids Res. 35 2007 W522 W525
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Dolinsky, T.J.1
Czodrowski, P.2
Li, H.3
Nielsen, J.E.4
Jensen, J.H.5
Klebe, G.6
Baker, N.A.7
-
41
-
-
68949116150
-
Alternative mechanisms for the interaction of the cell-penetrating peptides penetratin and the TAT peptide with lipid bilayers
-
S. Yesylevskyy, S.-J. Marrink, and A.E. Mark Alternative mechanisms for the interaction of the cell-penetrating peptides penetratin and the TAT peptide with lipid bilayers Biophys. J. 97 2009 40 49
-
(2009)
Biophys. J.
, vol.97
, pp. 40-49
-
-
Yesylevskyy, S.1
Marrink, S.-J.2
Mark, A.E.3
-
42
-
-
35949011154
-
Curvature elasticity of pure and mixed surfactant films
-
I. Szleifer, D. Kramer, A. Ben-Shaul, D. Roux, and W.M. Gelbart Curvature elasticity of pure and mixed surfactant films Phys. Rev. Lett. 60 1988 1966 1969
-
(1988)
Phys. Rev. Lett.
, vol.60
, pp. 1966-1969
-
-
Szleifer, I.1
Kramer, D.2
Ben-Shaul, A.3
Roux, D.4
Gelbart, W.M.5
-
43
-
-
11044233935
-
Coarse-grained simulations of lipid bilayers
-
M.J. Stevens Coarse-grained simulations of lipid bilayers J. Chem. Phys. 121 2004 11942 11948
-
(2004)
J. Chem. Phys.
, vol.121
, pp. 11942-11948
-
-
Stevens, M.J.1
-
44
-
-
0038778549
-
Evidence for membrane thinning effect as the mechanism for peptide-induced pore formation
-
F.-Y. Chen, M.-T. Lee, and H.W. Huang Evidence for membrane thinning effect as the mechanism for peptide-induced pore formation Biophys. J. 84 2003 3751 3758
-
(2003)
Biophys. J.
, vol.84
, pp. 3751-3758
-
-
Chen, F.-Y.1
Lee, M.-T.2
Huang, H.W.3
-
45
-
-
33749535555
-
Interaction of protegrin-1 with lipid bilayers: Membrane thinning effect
-
H. Jang, B. Ma, T.B. Woolf, and R. Nussinov Interaction of protegrin-1 with lipid bilayers: membrane thinning effect Biophys. J. 91 2006 2848 2859
-
(2006)
Biophys. J.
, vol.91
, pp. 2848-2859
-
-
Jang, H.1
Ma, B.2
Woolf, T.B.3
Nussinov, R.4
-
46
-
-
0034635136
-
Membrane thinning effect of the β-sheet antimicrobial protegrin †
-
W.T. Heller, A.J. Waring, R.I. Lehrer, T.A. Harroun, T.M. Weiss, L. Yang, and H.W. Huang Membrane thinning effect of the β-sheet antimicrobial protegrin † Biochemistry 39 1999 139 145
-
(1999)
Biochemistry
, vol.39
, pp. 139-145
-
-
Heller, W.T.1
Waring, A.J.2
Lehrer, R.I.3
Harroun, T.A.4
Weiss, T.M.5
Yang, L.6
Huang, H.W.7
-
47
-
-
25144486270
-
Order parameters of unsaturated phospholipids in membranes and the effect of cholesterol: A 1H-13C solid-state NMR study at natural abundance
-
D. Warschawski, and P. Devaux Order parameters of unsaturated phospholipids in membranes and the effect of cholesterol: a 1H-13C solid-state NMR study at natural abundance Eur. Biophys. J. 34 2005 987 996
-
(2005)
Eur. Biophys. J.
, vol.34
, pp. 987-996
-
-
Warschawski, D.1
Devaux, P.2
-
48
-
-
34548065978
-
Simulation studies of pore and domain formation in a phospholipid monolayer
-
V. Knecht, M. Muller, M. Bonn, S.-J. Marrink, and A.E. Mark Simulation studies of pore and domain formation in a phospholipid monolayer J. Chem. Phys. 122 2005 024704
-
(2005)
J. Chem. Phys.
, vol.122
, pp. 024704
-
-
Knecht, V.1
Muller, M.2
Bonn, M.3
Marrink, S.-J.4
Mark, A.E.5
-
49
-
-
76149102555
-
Force field dependence of phospholipid headgroup and acyl chain properties: Comparative molecular dynamics simulations of DMPC bilayers
-
P. Prakash, and R. Sankararamakrishnan Force field dependence of phospholipid headgroup and acyl chain properties: comparative molecular dynamics simulations of DMPC bilayers J. Comput. Chem. 31 2010 266 277
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 266-277
-
-
Prakash, P.1
Sankararamakrishnan, R.2
-
50
-
-
33749529387
-
Enhanced membrane disruption and antibiotic action against pathogenic bacteria by designed histidine-rich peptides at acidic pH
-
A.J. Mason, C. Gasnier, A. Kichler, G. Prevost, D. Aunis, M.H. Metz-Boutigue, and B. Bechinger Enhanced membrane disruption and antibiotic action against pathogenic bacteria by designed histidine-rich peptides at acidic pH Antimicrob. Agents Chemother. 50 2006 3305 3311
-
(2006)
Antimicrob. Agents Chemother.
, vol.50
, pp. 3305-3311
-
-
Mason, A.J.1
Gasnier, C.2
Kichler, A.3
Prevost, G.4
Aunis, D.5
Metz-Boutigue, M.H.6
Bechinger, B.7
-
51
-
-
33845527174
-
Correction of apparent finite size effects in the area per lipid of lipid membranes simulations
-
H.D. Herce, and A.E. Garcia Correction of apparent finite size effects in the area per lipid of lipid membranes simulations J. Chem. Phys. 125 2006 224711
-
(2006)
J. Chem. Phys.
, vol.125
, pp. 224711
-
-
Herce, H.D.1
Garcia, A.E.2
-
52
-
-
33846118354
-
Investigation of finite system-size effects in molecular dynamics simulations of lipid bilayers
-
F. Castro-Román, R.W. Benz, S.H. White, and D.J. Tobias Investigation of finite system-size effects in molecular dynamics simulations of lipid bilayers J. Phys. Chem. B 110 2006 24157 24164
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 24157-24164
-
-
Castro-Román, F.1
Benz, R.W.2
White, S.H.3
Tobias, D.J.4
-
53
-
-
0033932839
-
Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations
-
E. Lindahl, and O. Edholm Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations Biophys. J. 79 2000 426 433
-
(2000)
Biophys. J.
, vol.79
, pp. 426-433
-
-
Lindahl, E.1
Edholm, O.2
-
54
-
-
16644389728
-
The range and shielding of dipole-dipole interactions in phospholipid bilayers
-
J. Wohlert, and O. Edholm The range and shielding of dipole-dipole interactions in phospholipid bilayers Biophys. J. 87 2004 2433 2445
-
(2004)
Biophys. J.
, vol.87
, pp. 2433-2445
-
-
Wohlert, J.1
Edholm, O.2
-
55
-
-
80052835357
-
Competing interactions for antimicrobial selectivity based on charge complementarity
-
C.I.E. von Deuster, and V. Knecht Competing interactions for antimicrobial selectivity based on charge complementarity Biochim. Biophys. Acta Biomembr. 1808 2011 2867 2876
-
(2011)
Biochim. Biophys. Acta Biomembr.
, vol.1808
, pp. 2867-2876
-
-
Von Deuster, C.I.E.1
Knecht, V.2
-
56
-
-
25844488331
-
Interaction of the antimicrobial peptide cyclo(RRWWRF) with membranes by molecular dynamics simulations
-
C. Appelt, F. Eisenmenger, R. Kühne, P. Schmieder, and J.A. Söderhäll Interaction of the antimicrobial peptide cyclo(RRWWRF) with membranes by molecular dynamics simulations Biophys. J. 89 2005 2296 2306
-
(2005)
Biophys. J.
, vol.89
, pp. 2296-2306
-
-
Appelt, C.1
Eisenmenger, F.2
Kühne, R.3
Schmieder, P.4
Söderhäll, J.A.5
-
57
-
-
79960015637
-
Structural basis for the enhanced activity of cyclic antimicrobial peptides: The case of BPC194
-
J.T. Mika, G. Moiset, A.D. Cirac, L. Feliu, E. Bardají, M. Planas, D. Sengupta, S.J. Marrink, and B. Poolman Structural basis for the enhanced activity of cyclic antimicrobial peptides: the case of BPC194 Biochim. Biophys. Acta Biomembr. 1808 2011 2197 2205
-
(2011)
Biochim. Biophys. Acta Biomembr.
, vol.1808
, pp. 2197-2205
-
-
Mika, J.T.1
Moiset, G.2
Cirac, A.D.3
Feliu, L.4
Bardají, E.5
Planas, M.6
Sengupta, D.7
Marrink, S.J.8
Poolman, B.9
-
58
-
-
79959680205
-
The molecular basis for antimicrobial activity of pore-forming cyclic peptides
-
Anna D. Cirac, G. Moiset, Jacek T. Mika, A. Koçer, P. Salvador, B. Poolman, Siewert J. Marrink, and D. Sengupta The molecular basis for antimicrobial activity of pore-forming cyclic peptides Biophys. J. 100 2011 2422 2431
-
(2011)
Biophys. J.
, vol.100
, pp. 2422-2431
-
-
Cirac, A.D.1
Moiset, G.2
Mika, J.T.3
Koçer, A.4
Salvador, P.5
Poolman, B.6
Marrink, S.J.7
Sengupta, D.8
-
59
-
-
47549101006
-
Efficient free energy calculation of water across lipid membranes
-
K. Shinoda, W. Shinoda, and M. Mikami Efficient free energy calculation of water across lipid membranes J. Comput. Chem. 29 2008 1912 1918
-
(2008)
J. Comput. Chem.
, vol.29
, pp. 1912-1918
-
-
Shinoda, K.1
Shinoda, W.2
Mikami, M.3
-
60
-
-
84864227931
-
Multiscale simulations of the antimicrobial peptide caculatin 1.1: Water permeation through disordered aggregates
-
D.L. Parton, E.V. Akhmatskaya, and M.S.P. Sansom Multiscale simulations of the antimicrobial peptide caculatin 1.1: water permeation through disordered aggregates J. Phys. Chem. B 116 2012 8485 8493
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 8485-8493
-
-
Parton, D.L.1
Akhmatskaya, E.V.2
Sansom, M.S.P.3
-
61
-
-
33751158845
-
Simulation of water transport through a lipid membrane
-
S.-J. Marrink, and H.J.C. Berendsen Simulation of water transport through a lipid membrane J. Phys. Chem. 98 1994 4155 4168
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 4155-4168
-
-
Marrink, S.-J.1
Berendsen, H.J.C.2
-
62
-
-
77955801316
-
Solubilization of aromatic and hydrophobic moieties by arginine in aqueous solutions
-
J.G. Li, M. Garg, D. Shah, and R. Rajagopalan Solubilization of aromatic and hydrophobic moieties by arginine in aqueous solutions J. Chem. Phys. 133 2010
-
(2010)
J. Chem. Phys.
, vol.133
-
-
Li, J.G.1
Garg, M.2
Shah, D.3
Rajagopalan, R.4
-
63
-
-
77954831684
-
Membrane-bound dynamic structure of an arginine-rich cell-penetrating peptide, the protein transduction domain of HIV TAT, from solid-state NMR
-
Y. Su, A.J. Waring, P. Ruchala, and M. Hong Membrane-bound dynamic structure of an arginine-rich cell-penetrating peptide, the protein transduction domain of HIV TAT, from solid-state NMR Biochemistry 49 2010 6009 6020
-
(2010)
Biochemistry
, vol.49
, pp. 6009-6020
-
-
Su, Y.1
Waring, A.J.2
Ruchala, P.3
Hong, M.4
-
65
-
-
4544325461
-
The structure of aqueous guanidinium chloride solutions
-
P.E. Mason, G.W. Neilson, J.E. Enderby, M.-L. Saboungi, C.E. Dempsey, A.D. MacKerell, and J.W. Brady The structure of aqueous guanidinium chloride solutions J. Am. Chem. Soc. 126 2004 11462 11470
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 11462-11470
-
-
Mason, P.E.1
Neilson, G.W.2
Enderby, J.E.3
Saboungi, M.-L.4
Dempsey, C.E.5
MacKerell, A.D.6
Brady, J.W.7
-
66
-
-
78650910224
-
The role of electrostatic interactions in the membrane binding of melittin
-
K. Hall, T.-H. Lee, and M.-I. Aguilar The role of electrostatic interactions in the membrane binding of melittin J. Mol. Recognit. 24 2011 108 118
-
(2011)
J. Mol. Recognit.
, vol.24
, pp. 108-118
-
-
Hall, K.1
Lee, T.-H.2
Aguilar, M.-I.3
-
67
-
-
84870904624
-
Electrostatic interactions between antimicrobial peptides and anionic membranes: Insights from an implicit membrane model
-
Y. He, L. Prieto, and T. Lazaridis Electrostatic interactions between antimicrobial peptides and anionic membranes: insights from an implicit membrane model Biophys. J. 100 2011 497a
-
(2011)
Biophys. J.
, vol.100
-
-
He, Y.1
Prieto, L.2
Lazaridis, T.3
-
68
-
-
58749101895
-
Pore formation induced by an antimicrobial peptide: Electrostatic effects
-
F. Jean-François, J. Elezgaray, P. Berson, P. Vacher, and E.J. Dufourc Pore formation induced by an antimicrobial peptide: electrostatic effects Biophys. J. 95 2008 5748 5756
-
(2008)
Biophys. J.
, vol.95
, pp. 5748-5756
-
-
Jean-François, F.1
Elezgaray, J.2
Berson, P.3
Vacher, P.4
Dufourc, E.J.5
|