Automatic detection of fast ripples

Journal of Neuroscience Methods

Volumn 213, Issue 2, 2013, Pages 236-249

  Birot, Gwénaël ^a   Kachenoura, Amar ^a   Albera, Laurent ^a   Bénar, Christian ^b,c   Wendling, Fabrice ^a  

^a UNIVERSITÉ DE RENNES 1   (France)

^b INSERM   (France)

^c TIMONE HOSPITAL   (France)

Author keywords

Detection; EEG; Epilepsy; Fast ripple; Filtering; Fourier transform; Interictal epileptic spike; Time frequency; Wavelet transform

Indexed keywords

ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; ELECTROENCEPHALOGRAPHY; EPILEPSY; FAST RIPPLE; HIGH FREQUENCY OSCILLATION; HUMAN; INFRARED SPECTROSCOPY; MOUSE; NONHUMAN; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SIGNAL DETECTION; SPIKE WAVE; WAVELET ANALYSIS;

ANIMALS; BRAIN; ELECTROENCEPHALOGRAPHY; HUMANS; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED;

EID: 84873801121     PISSN: 01650270     EISSN: 1872678X     Source Type: Journal    
DOI: 10.1016/j.jneumeth.2012.12.013     Document Type: Article

References (33)

1. Baker S.N., Curio G., Lemon R.N. EEG oscillations at 600Hz are macroscopic markers for cortical spike bursts. J Physiol 2003, 550:529-534.
2. Bartolomei F., Guye M., Gavaret M., Regis J., Wendling F., Raybaud C., et al. The presurgical evaluation of epilepsies. Rev Neurol (Paris) 2002, 158:4S55-64S.
3. Benar C.G., Chauviere L., Bartolomei F., Wendling F. Pitfalls of high-pass filtering for detecting epileptic oscillations: a technical note on " false" ripples. Clin Neurophysiol 2010, 121:301-310.
4. Blanco J.A., Stead M., Krieger A., Viventi J., Marsh W.R., Lee K.H., et al. Unsupervised classification of high-frequency oscillations in human neocortical epilepsy and control patients. J Neurophysiol 2010, 104:2900-2912.
5. Bouilleret V., Loup F., Kiener T., Marescaux C., Fritschy J.M. Early loss of interneurons and delayed subunit-specific changes in GABA(A)-receptor expression in a mouse model of mesial temporal lobe epilepsy. Hippocampus 2000, 10:305-324.
6. Bragin A., Engel J., Wilson C.L., Fried I., Buzsaki G. High-frequency oscillations in human brain. Hippocampus 1999, 9:137-142.
7. Bragin A., Engel J., Wilson C.L., Vizentin E., Mathern G.W. Electrophysiologic analysis of a chronic seizure model after unilateral hippocampal KA injection. Epilepsia 1999, 40:1210-1221.
8. Bragin A., Wilson C.L., Staba R.J., Reddick M., Fried I., Engel J. Interictal high-frequency oscillations (80-500Hz) in the human epileptic brain: entorhinal cortex. Ann Neurol 2002, 52:407-415.
9. Buzsaki G., Lopes da Silva F. High frequency oscillations in the intact brain. Prog Neurobiol 2012, 98:241-249.
10. Casson A.J., Luna E., Rodriguez-Villegas E. Performance metrics for the accurate characterisation of interictal spike detection algorithms. J Neurosci Methods. 2009, 177(2):479-487.
11. Crepon B., Navarro V., Hasboun D., Clemenceau S., Martinerie J., Baulac M., et al. Mapping interictal oscillations greater than 200Hz recorded with intracranial macroelectrodes in human epilepsy. Brain 2010, 133:33-45.
12. Demont-Guignard S., Benquet P., Gerber U., Biraben A., Martin B., Wendling F. Distinct hyperexcitability mechanisms underlie fast ripples and epileptic spikes. Ann Neurol 2012, 71:342-352.
13. Engel J., Bragin A., Staba R., Mody I. High-frequency oscillations: what is normal and what is not?. Epilepsia 2009, 50:598-604.
14. Fleureau J., Kachenoura A., Albera L., Nunes J., Senhadji L. Multivariate empirical mode decomposition and application to multichannel filtering. Elsevier Signal Process 2011, 91:2783-2792.
15. Fleureau J., Nunes J., Kachenoura A., Albera L., Senhadji L. Turning tangent empirical mode decomposition: a unified framework for mono- and multivariate signals. IEEE Trans Signal Process 2011, 59:1309-1316.
16. Gardner A.B., Worrell G.A., Marsh E., Dlugos D., Litt B. Human and automated detection of high-frequency oscillations in clinical intracranial EEG recordings. Clin Neurophysiol 2007, 118:1134-1143.
17. Gotman J. Automatic detection of seizures and spikes. J Clin Neurophysiol 1999, 16:130-140.
18. Gotman J., Gloor P. Automatic recognition and quantification of interictal epileptic activity in the human scalp EEG. Electroencephalogr Clin Neurophysiol 1976, 41:513-529.
19. Jacobs J., LeVan P., Chander R., Hall J., Dubeau F., Gotman J. Interictal high-frequency oscillations (80-500Hz) are an indicator of seizure onset areas independent of spikes in the human epileptic brain. Epilepsia 2008, 49:1893-1907.
20. Jacobs J., Levan P., Chatillon C.E., Olivier A., Dubeau F., Gotman J. High frequency oscillations in intracranial EEGs mark epileptogenicity rather than lesion type. Brain 2009, 132:1022-1037.
21. Jefferys J.G., de la Prida L.M., Wendling F., Bragin A., Avoli M., Timofeev I., et al. Mechanisms of physiological and epileptic HFO generation. Prog Neurobiol 2012.
22. Jmail N., Gavaret M., Wendling F., Kachouri A., Hamadi G., Badier J.M., et al. A comparison of methods for separation of transient and oscillatory signals in EEG. J Neurosci Methods 2011, 199:273-289.
23. Mallat S., Zhang Z. Matching pursuit in a time-frequency dictionary. IEEE Trans Signal Process 1993, 41:3397-3415.
24. Papoulis A. Probability, random variables and stochastic processes 1991, McGraw Hill, New York, USA. 3th ed.
25. Staba R.J., Wilson C.L., Bragin A., Fried I., Engel J. Quantitative analysis of high-frequency oscillations (80-500Hz) recorded in human epileptic hippocampus and entorhinal cortex. J Neurophysiol 2002, 88:1743-1752.
26. Suzuki F., Junier M.P., Guilhem D., Sorensen J.C., Onteniente B. Morphogenetic effect of kainate on adult hippocampal neurons associated with a prolonged expression of brain-derived neurotrophic factor. Neuroscience 1995, 64:665-674.
27. Tzallas A.T., Oikonomou V.P., Fotiadis D.I. Epileptic spike detection using a kalman filter based approach. Conf Proc IEEE Eng Med Biol Soc 2006, 1:501-504.
28. Wendling F., Bartolomei F., Bellanger J.J., Chauvel P. Epileptic fast activity can be explained by a model of impaired GABAergic dendritic inhibition. Eur J Neurosci 2002, 15:1499-1508.
29. Wendling F., Hernandez A., Bellanger J.J., Chauvel P., Bartolomei F. Interictal to ictal transition in human temporal lobe epilepsy: insights from a computational model of intracerebral EEG. J Clin Neurophysiol 2005, 22:343-356.
30. Worrell G., Gotman J. High-frequency oscillations and other electrophysiological biomarkers of epilepsy: clinical studies. Biomark Med 2011, 5:557-566.
31. Worrell G.A., Parish L., Cranstoun S.D., Jonas R., Baltuch G., Litt B. High-frequency oscillations and seizure generation in neocortical epilepsy. Brain 2004, 127:1496-1506.
32. Zelmann R., Mari F., Jacobs J., Zijlmans M., Dubeau F., Gotman J. A comparison between detectors of high frequency oscillations. Clin Neurophysiol 2012, 123:106-116.
33. Zijlmans M., Jacobs J., Zelmann R., Dubeau F., Gotman J. High-frequency oscillations mirror disease activity in patients with epilepsy. Neurology 2009, 72:979-986.