메뉴 건너뛰기




Volumn 15, Issue 2, 2013, Pages 384-394

Population genetic structure of the tropical moss Acanthorrhynchium papillatum as measured with microsatellite markers

Author keywords

Allelic and haplotypic diversity; Habitat quality; Isolated populations; Microsatellite mutations; Plant population genetics

Indexed keywords

MICROSATELLITE DNA;

EID: 84873455488     PISSN: 14358603     EISSN: 14388677     Source Type: Journal    
DOI: 10.1111/j.1438-8677.2012.00640.x     Document Type: Article
Times cited : (8)

References (40)
  • 3
    • 58549111352 scopus 로고    scopus 로고
    • Genetic structure of East Antarctic populations of the moss Ceratodon purpureus
    • Clarke L.J., Ayre D.J., Robinson S.A. (2009) Genetic structure of East Antarctic populations of the moss Ceratodon purpureus. Antarctic Science, 21, 51-58.
    • (2009) Antarctic Science , vol.21 , pp. 51-58
    • Clarke, L.J.1    Ayre, D.J.2    Robinson, S.A.3
  • 4
    • 0029759465 scopus 로고    scopus 로고
    • High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco
    • El Mousadik A., Petit R.J. (1996) High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theoretical and Applied Genetics, 92, 832-839.
    • (1996) Theoretical and Applied Genetics , vol.92 , pp. 832-839
    • El Mousadik, A.1    Petit, R.J.2
  • 5
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
    • Excoffier L., Smouse P.E., Quattro J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 6
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin version 3.0: an integrated software package for population genetics data analysis
    • Excoffier L., Laval G., Schneider S. (2005b) Arlequin version 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47-50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 7
    • 0003437302 scopus 로고    scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, WA, USA.
    • Felsenstein J. (2005) PHYLIP (Phylogeny inference package) version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, WA, USA.
    • (2005) PHYLIP (Phylogeny inference package) version 3.6
    • Felsenstein, J.1
  • 8
    • 79955744844 scopus 로고    scopus 로고
    • Deep sequencing of Ptilidium (Ptilidiaceae) suggests evolutionary stasis in liverwort plastid genome structure
    • Forrest L.L., Wickett N.J., Cox C.J., Goffinet B. (2011) Deep sequencing of Ptilidium (Ptilidiaceae) suggests evolutionary stasis in liverwort plastid genome structure. Plant Ecology and Evolution, 144, 29-43.
    • (2011) Plant Ecology and Evolution , vol.144 , pp. 29-43
    • Forrest, L.L.1    Wickett, N.J.2    Cox, C.J.3    Goffinet, B.4
  • 9
    • 84873433270 scopus 로고    scopus 로고
    • Hallingbäck T., Hodgetts N. (Eds) () Mosses, liverworts, and hornworts. Status survey and conservation action plan for bryophytes. IUCN/SSC Bryophyte Specialist Group, Cambridge.
    • Hallingbäck T., Hodgetts N. (Eds) (2000) Mosses, liverworts, and hornworts. Status survey and conservation action plan for bryophytes. IUCN/SSC Bryophyte Specialist Group, Cambridge.
    • (2000)
  • 10
    • 26444601155 scopus 로고    scopus 로고
    • Genetic variation and structure in the expanding moss Pogonatum dentatum (Polytrichaceae) in its area of origin and in a recently colonized area
    • Hassel K., Såstad S.M., Gunnarson U., Söderström L. (2005) Genetic variation and structure in the expanding moss Pogonatum dentatum (Polytrichaceae) in its area of origin and in a recently colonized area. American Journal of Botany, 92, 1684-1690.
    • (2005) American Journal of Botany , vol.92 , pp. 1684-1690
    • Hassel, K.1    Såstad, S.M.2    Gunnarson, U.3    Söderström, L.4
  • 11
    • 4544293053 scopus 로고    scopus 로고
    • Counting alleles with rarefaction: private alleles and hierarchical sampling designs
    • Kalinowski S.T. (2004) Counting alleles with rarefaction: private alleles and hierarchical sampling designs. Conservation Genetics, 5, 530-543.
    • (2004) Conservation Genetics , vol.5 , pp. 530-543
    • Kalinowski, S.T.1
  • 12
    • 14844358868 scopus 로고    scopus 로고
    • HP-RARE 1.0: a computer program for performing rarefaction on measures of allelic richness
    • Kalinowski S.T. (2005) HP-RARE 1.0: a computer program for performing rarefaction on measures of allelic richness. Molecular Ecology Notes, 5, 187-189.
    • (2005) Molecular Ecology Notes , vol.5 , pp. 187-189
    • Kalinowski, S.T.1
  • 13
    • 79956080197 scopus 로고    scopus 로고
    • The peat moss Sphagnum cuspidatum in Australia: microsatellites provide a global perspective
    • Karlin E.F., Boles S.B., Seppelt R.D., Terracciano S., Shaw A.J. (2011) The peat moss Sphagnum cuspidatum in Australia: microsatellites provide a global perspective. Systematic Botany, 36, 22-32.
    • (2011) Systematic Botany , vol.36 , pp. 22-32
    • Karlin, E.F.1    Boles, S.B.2    Seppelt, R.D.3    Terracciano, S.4    Shaw, A.J.5
  • 14
    • 0033024114 scopus 로고    scopus 로고
    • Genetic variation in three species of epiphytic Octoblepharum (Leucobryaceae)
    • Korpelainen H., Salazar-Allen N. (1999) Genetic variation in three species of epiphytic Octoblepharum (Leucobryaceae). Nova Hedwigia, 68, 281-290.
    • (1999) Nova Hedwigia , vol.68 , pp. 281-290
    • Korpelainen, H.1    Salazar-Allen, N.2
  • 15
    • 34447544189 scopus 로고    scopus 로고
    • Microsatellite marker identification using genome screening and restriction-ligation
    • Korpelainen H., Kostamo K., Virtanen V. (2007) Microsatellite marker identification using genome screening and restriction-ligation. BioTechniques, 42, 479-486.
    • (2007) BioTechniques , vol.42 , pp. 479-486
    • Korpelainen, H.1    Kostamo, K.2    Virtanen, V.3
  • 16
    • 33646857714 scopus 로고    scopus 로고
    • Development of microsatellite markers for the tropical moss, Acanthorrhynchium papillatum
    • Leonardía A.A.P., Kumar P.P., Tan B.C. (2006) Development of microsatellite markers for the tropical moss, Acanthorrhynchium papillatum. Molecular Ecology Notes, 6, 396-398.
    • (2006) Molecular Ecology Notes , vol.6 , pp. 396-398
    • Leonardía, A.A.P.1    Kumar, P.P.2    Tan, B.C.3
  • 17
    • 0029984827 scopus 로고    scopus 로고
    • A generic estimation of population subdivision using distances between alleles with special reference for microsatellite loci
    • Michalakis Y., Excoffier L. (1996) A generic estimation of population subdivision using distances between alleles with special reference for microsatellite loci. Genetics, 142, 1061-1064.
    • (1996) Genetics , vol.142 , pp. 1061-1064
    • Michalakis, Y.1    Excoffier, L.2
  • 18
    • 0008950163 scopus 로고    scopus 로고
    • The biology of bryophytes-bryophytes aren't just small tracheophytes
    • Mishler B.D. (2001) The biology of bryophytes-bryophytes aren't just small tracheophytes. American Journal of Botany, 88, 2129-2131.
    • (2001) American Journal of Botany , vol.88 , pp. 2129-2131
    • Mishler, B.D.1
  • 19
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • Nei M. (1972) Genetic distance between populations. American Naturalist, 106, 283-292.
    • (1972) American Naturalist , vol.106 , pp. 283-292
    • Nei, M.1
  • 21
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenetic trees from molecular data
    • Nei M., Tajima F., Tateno Y. (1983) Accuracy of estimated phylogenetic trees from molecular data. Journal of Molecular Evolution, 19, 153-170.
    • (1983) Journal of Molecular Evolution , vol.19 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 22
    • 0041020253 scopus 로고    scopus 로고
    • A revision of Acanthorrhynchium (Sematophyllaceae) in Africa
    • O'Shea B.J. (1997) A revision of Acanthorrhynchium (Sematophyllaceae) in Africa. Tropical Bryology, 13, 125-130.
    • (1997) Tropical Bryology , vol.13 , pp. 125-130
    • O'Shea, B.J.1
  • 23
    • 84873482841 scopus 로고
    • DISPAN: genetic distance and phylogenetic analysis. Available from (accessed 1 June 2006).
    • Ota T. (1993) DISPAN: genetic distance and phylogenetic analysis. Available from http://www.bio.psu.edu/People/Faculty/Nei/Lab/software.htm (accessed 1 June 2006).
    • (1993)
    • Ota, T.1
  • 24
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: an application to display phylogenetic trees on personal computers
    • Page R.D.M. (1996) TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences, 12, 357-358.
    • (1996) Computer Applications in the Biosciences , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 25
    • 84873421109 scopus 로고    scopus 로고
    • Trypanotolerance in West African cattle and the population genetic effects of selection. Ph.D. thesis, University of Dublin.
    • Park S.D.E. (2001) Trypanotolerance in West African cattle and the population genetic effects of selection. Ph.D. thesis, University of Dublin.
    • (2001)
    • Park, S.D.E.1
  • 26
    • 33645319953 scopus 로고    scopus 로고
    • Vegetative reproduction and clonal diversity in Rhytidium rugosum (Rhytidiaceae, Bryopsida) inferred by morpho-anatomical and molecular analyses
    • Pfeiffer T., Fritz S., Stech M., Frey W. (2006) Vegetative reproduction and clonal diversity in Rhytidium rugosum (Rhytidiaceae, Bryopsida) inferred by morpho-anatomical and molecular analyses. Journal of Plant Research, 119, 125-135.
    • (2006) Journal of Plant Research , vol.119 , pp. 125-135
    • Pfeiffer, T.1    Fritz, S.2    Stech, M.3    Frey, W.4
  • 27
    • 33847365298 scopus 로고    scopus 로고
    • Development of microsatellites for the peat moss Sphagnum capillifolium using ISSR cloning
    • Provan J., Wilson P.J. (2006) Development of microsatellites for the peat moss Sphagnum capillifolium using ISSR cloning. Molecular Ecology Notes, 7, 254-256.
    • (2006) Molecular Ecology Notes , vol.7 , pp. 254-256
    • Provan, J.1    Wilson, P.J.2
  • 28
    • 0029178096 scopus 로고
    • An exact test for population differentiation
    • Raymond M., Rousset F. (1995a) An exact test for population differentiation. Evolution, 49, 1280-1283.
    • (1995) Evolution , vol.49 , pp. 1280-1283
    • Raymond, M.1    Rousset, F.2
  • 29
    • 0000262278 scopus 로고
    • GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism
    • Raymond M., Rousset F. (1995b) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248-249.
    • (1995) Journal of Heredity , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 44, 406-425.
    • (1987) Molecular Biology and Evolution , vol.44 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 43449091577 scopus 로고    scopus 로고
    • Genetic variation in three Chinese peat mosses (Sphagnum) based on microsatellite markers, with primer information and analysis of ascertainment bias
    • Shaw A.J., Tong Cao T., Wang L.S., Flatberg K.I., Flatberg B., Shaw B., Zhou P., Boles S., Terracciano S. (2008) Genetic variation in three Chinese peat mosses (Sphagnum) based on microsatellite markers, with primer information and analysis of ascertainment bias. The Bryologist, 111, 271-281.
    • (2008) The Bryologist , vol.111 , pp. 271-281
    • Shaw, A.J.1    Tong Cao, T.2    Wang, L.S.3    Flatberg, K.I.4    Flatberg, B.5    Shaw, B.6    Zhou, P.7    Boles, S.8    Terracciano, S.9
  • 32
    • 84963034277 scopus 로고
    • Multiple regression and correlation extensions of the Mantel test of matrix correspondence
    • Smouse P.E., Long J.C., Sokal R.R. (1986) Multiple regression and correlation extensions of the Mantel test of matrix correspondence. Systematic Zoology, 35, 627-632.
    • (1986) Systematic Zoology , vol.35 , pp. 627-632
    • Smouse, P.E.1    Long, J.C.2    Sokal, R.R.3
  • 33
    • 0034493542 scopus 로고    scopus 로고
    • Genetic variability in the rare Norwegian peat moss Sphagnum troendelagicum
    • Stenøien H.K., Flatberg K.I. (2000) Genetic variability in the rare Norwegian peat moss Sphagnum troendelagicum. The Bryologist, 103, 794-801.
    • (2000) The Bryologist , vol.103 , pp. 794-801
    • Stenøien, H.K.1    Flatberg, K.I.2
  • 34
    • 0000361246 scopus 로고    scopus 로고
    • Amplified fragment length polymorphism between populations of Amblystegium tenax exposed to contrasting water chemistries
    • Vanderpoorten A., Tignon M. (2000) Amplified fragment length polymorphism between populations of Amblystegium tenax exposed to contrasting water chemistries. Journal of Bryology, 22, 257-262.
    • (2000) Journal of Bryology , vol.22 , pp. 257-262
    • Vanderpoorten, A.1    Tignon, M.2
  • 35
    • 0034480192 scopus 로고    scopus 로고
    • Amount and structure of intra- and interspecific genetic variation in the moss genus Polytrichum
    • van der Velde M., Bijlsma R. (2000) Amount and structure of intra- and interspecific genetic variation in the moss genus Polytrichum. Heredity, 85, 328-337.
    • (2000) Heredity , vol.85 , pp. 328-337
    • van der Velde, M.1    Bijlsma, R.2
  • 37
    • 2542436219 scopus 로고    scopus 로고
    • Hybridization and asymmetric reproductive isolation between the closely related bryophyte taxa Polytrichum commune and P. uliginosum
    • van der Velde M., Bijlsma R. (2004) Hybridization and asymmetric reproductive isolation between the closely related bryophyte taxa Polytrichum commune and P. uliginosum. Molecular Ecology, 13, 1447-1454.
    • (2004) Molecular Ecology , vol.13 , pp. 1447-1454
    • van der Velde, M.1    Bijlsma, R.2
  • 38
    • 0033770863 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellites in the moss species Polytrichum formosum
    • van der Velde M., van der Strate H.J., van de Zande L., Bijlsma R. (2000) Isolation and characterization of microsatellites in the moss species Polytrichum formosum. Molecular Ecology, 9, 1678-1680.
    • (2000) Molecular Ecology , vol.9 , pp. 1678-1680
    • van der Velde, M.1    van der Strate, H.J.2    van de Zande, L.3    Bijlsma, R.4
  • 39
    • 0037461297 scopus 로고    scopus 로고
    • Effect of habitat fragmentation on levels and patterns of genetic diversity in natural populations of the peat moss Polytrichum commune
    • Wilson P.J., Provan J. (2003) Effect of habitat fragmentation on levels and patterns of genetic diversity in natural populations of the peat moss Polytrichum commune. Proceedings of the Royal Society of London B, 270, 881-886.
    • (2003) Proceedings of the Royal Society of London B , vol.270 , pp. 881-886
    • Wilson, P.J.1    Provan, J.2
  • 40
    • 0034085868 scopus 로고    scopus 로고
    • RAPD markers for genetic differentiation of species within Polytrichum (Polytrichaceae, Musci): a preliminary survey
    • Zouhair R., Corradini P., Defontaine A., Hallet J.N. (2000) RAPD markers for genetic differentiation of species within Polytrichum (Polytrichaceae, Musci): a preliminary survey. Taxon, 49, 217-229.
    • (2000) Taxon , vol.49 , pp. 217-229
    • Zouhair, R.1    Corradini, P.2    Defontaine, A.3    Hallet, J.N.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.