Backbone and side chain 1H, 13C, and 15N assignments of the ubiquitin-like domain of human HOIL-1L, an essential component of linear ubiquitin chain assembly complex

Biomolecular NMR Assignments

Volumn 6, Issue 2, 2012, Pages 177-180

  Uekusa, Yoshinori ^a,b   Mimura, Syunsuke ^b   Sasakawa, Hiroaki ^a,b   Kurimoto, Eiji ^b,c   Sakata, Eri ^b   Olivier, Serve ^a,b   Yagi, Hirokazu ^b   Tokunaga, Fuminori ^d,e   Iwai, Kazuhiro ^d   Kato, Koichi ^a,b  

^a INSTITUTE FOR MOLECULAR SCIENCE   (Japan)

^b NAGOYA CITY UNIVERSITY   (Japan)

^c MEIJO UNIVERSITY   (Japan)

^d OSAKA UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^e GUNMA UNIVERSITY   (Japan)

Author keywords

HOIL 1L; NMR spectroscopy; Resonance assignment; Ubiquitin like domain

Indexed keywords

CARBON; HOIL 1 PROTEIN, HUMAN; HOIL-1 PROTEIN, HUMAN; NITROGEN; PROTON; UBIQUITIN; UBIQUITIN PROTEIN LIGASE;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; HUMAN; METABOLISM; MOLECULAR GENETICS; NUCLEAR MAGNETIC RESONANCE; PROTEIN TERTIARY STRUCTURE;

AMINO ACID SEQUENCE; CARBON ISOTOPES; HUMANS; MOLECULAR SEQUENCE DATA; NITROGEN ISOTOPES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN STRUCTURE, TERTIARY; PROTONS; UBIQUITIN; UBIQUITIN-PROTEIN LIGASES;

EID: 84873189921     PISSN: 18742718     EISSN: 1874270X     Source Type: Journal    
DOI: 10.1007/s12104-011-9350-1     Document Type: Article

References (14)

1. Delaglio F, Grzesiek S, Vuister G et al (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6:277-293
2. Dikic I, Wakatsuki S, Walters KJ (2009) Ubiquitin-binding domains: from structures to functions. Nat Rev Mol Cell Biol 10:659-671
3. Goddard T, Kneller D (1993) SPARKY 3. University of California, San Francisco
4. Hershko A, Ciechanover A (1998) The ubiquitin system. Annu Rev Biochem 67:425-479
5. Iwai K, Tokunaga F (2009) Linear polyubiquitination: a new regulator of NF-κB activation. EMBO Rep 10:706-713
6. Kirisako T, Kamei K, Murata S et al (2006) A ubiquitin ligase complex assembles linear polyubiquitin chains. EMBO J 25:4877-4887
7. Lowe ED, Hasan N, Trempe JF et al (2006) Structures of the Dsk2 UBL and UBA domains and their complex. Acta Crystallogr D Biol Crystallogr 62:177-188
8. Peng J, Schwartz D, Elias JE et al (2003) A proteomics approach to understanding protein ubiquitination. Nat Biotechnol 21:921-926
9. Tokunaga F, Sakata S, Saeki Y et al (2009) Involvement of linear polyubiquitylation of NEMO in NF-κB activation. Nat Cell Biol 11:123-132
10. Vijay-Kumar S, Bugg C, Cook W (1987) Structure of ubiquitin 1.8 Å resolution. J Mol Biol 194:531-544
11. Vranken WF, Boucher W, Stevens TJ et al (2005) The CCPN data model for NMR spectroscopy: development of a software pipeline. Proteins 59:687-696
12. 13C chemical-shift data. J Biomol NMR 4:171-180
13. Yagi-Utsumi M, Matsuo K, Yanagisawa K et al (2011) Spectroscopic characterization of intermolecular interaction of amyloid β promoted on GM1 micelles. Int J Alzheimers Dis 2011:925073
14. Zhang D, Raasi S, Fushman D (2008) Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains. J Mol Biol 377:162-180