MALDI-TOF mass spectrometry-based identification of group A Streptococcus isolated from areas of the 2011 scarlet fever outbreak in china

Infection, Genetics and Evolution

Volumn 14, Issue 1, 2013, Pages 320-326

  Xiao, Di ^a   You, Yuanhai ^a   Bi, Zhenwang ^b   Wang, Haibin ^a   Zhang, Yongchan ^a   Hu, Bin ^b   Song, Yanyan ^a   Zhang, Huifang ^a   Kou, Zengqiang ^b   Yan, Xiaomei ^a   Zhang, Menghan ^c   Jin, Lianmei ^a   Jiang, Xihong ^a   Su, Peng ^a   Bi, Zhenqiang ^b   Luo, Fengji ^a   Zhang, Jianzhong ^a  

^a CHINESE CENTER FOR DISEASE CONTROL AND PREVENTION   (China)

^b Shandong Province CDC   (China)

^c Suzhou Municipal Center for Disease Control and Prevention   (China)

Author keywords

Biotyper; MALDI TOF MS; Rapid identification; Scarlet fever; Streptococcus pyogenes

Indexed keywords

BACITRACIN;

ANTIBIOTIC SENSITIVITY; ARTICLE; BACILLUS CEREUS; BACTERIAL STRAIN; BACTERIUM DETECTION; BACTERIUM ISOLATE; CHINA; CONTROLLED STUDY; ENTEROBACTER; ENTEROBACTER CLOACAE; ENTEROBACTER KOBEI; EPIDEMIC; HUMAN; KLEBSIELLA PNEUMONIAE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NEISSERIA; NEISSERIA FLAVESCENS; NEISSERIA PERFLAVA; NONHUMAN; PRIORITY JOURNAL; REFERENCE DATABASE; SCARLET FEVER; STAPHYLOCOCCUS AUREUS; STREPTOCOCCUS AGALACTIAE; STREPTOCOCCUS GROUP A; THROAT CULTURE;

CHINA; CLUSTER ANALYSIS; DATABASES, FACTUAL; DISEASE OUTBREAKS; HUMANS; SCARLET FEVER; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; STREPTOCOCCUS PYOGENES;

EID: 84873186487     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2012.12.007     Document Type: Article

References (31)

1. Alispahic M., Christensen H., Hess C., Razzazi-Fazeli E., Bisgaard M., Hess M. Identification of Gallibacterium species by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry evaluated by multilocus sequence analysis. Int. J. Med. Microbiol. 2011, 301(6):513-522.
2. Alispahic M., Hummel K., Jandreski-Cvetkovic D., Nöbauer K., Razzazi-Fazeli E., Hess M. Species-specific identification and differentiation of Arcobacter, Helicobacter and Campylobacter by full-spectral matrix-associated laser desorption/ionization time of flight mass spectrometry analysis. J. Med. Microbiol. 2010, 59(3):295-301.
3. Bessen D.E., Carapetis J.R., Beall B., Katz R., Hibble M., Currie B.J., Collingridge T., Izzo M.W., Scaramuzzino D.A., Sriprakash K.S. Contrasting molecular epidemiology of group A streptococci causing tropical and nontropical infections of the skin and throat. J. Infect. Dis. 2000, 182(4):1109-1116.
4. Bizzini A., Durussel C., Bille J., Greub G., Prod'hom G. Performance of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of bacterial strains routinely isolated in a clinical microbiology laboratory. J. Clin. Microbiol. 2010, 48:1549-1554.
5. Cherkaoui A., J.Hibbs S., Emonet M., Tangomo M., Girard P., Francois J., Schrenzel Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level. J. Clin. Microbiol. 2010, 48:1169-1175.
6. Carbonnelle E., Mesquita C., Bille E., Day N., Dauphin B., Beretti J.L., Ferroni A., Gutmann L., Nassif X. MALDI-TOF mass spectrometry tools for bacterial identification in clinical microbiology laboratory. Clin. Biochem. 2011, 44(1):104-109.
7. Carapetis J.R., Steer A.C., Mulholland E.K., Weber M. The global burden of group A streptococcal diseases. Lancet Infect. Dis. 2005, 5(11):685-694.
8. Chen M., Yao W., Wang X., Li Y., Chen M., Wang G., Zhang X., Pan H., Hu J., Zeng M. Outbreak of scarlet fever associated with emm12 type group A Streptococcus in 2011 in Shanghai. China Pediatr. Infect. Dis. J. 2012, 31(9):e158-e162.
9. Degand N., Carbonnelle E., Dauphin B., Beretti J.L., Le Bourgeois M., Sermet-Gaudelus I., Segonds C., Berche P., Nassif X., Ferroni A. Matrix-assisted laser desorption ionization-time of flight mass spectrometry or identification of nonfermenting gram-negative bacilli isolated from cystic fibrosis patients. J. Clin. Microbiol. 2008, 46(8):3361-3367.
10. De Carolis E., Posteraro B., Lass-Flörl C., Vella A., Florio A.R., Torelli R. Effect of culture conditions on microorganism identification by matrix-assisted laser desorption ionization mass spectrometry. Appl. Environ. Microbiol. 2005, 71:58-64.
11. De Carolis E., Posteraro B., Lass-Flörl C., Vella A., Florio A.R., Torelli R., Girmenia C., Colozza C., Tortorano A.M., Sanguinetti M., Fadda G. Species identification of Aspergillus, Fusarium and Mucorales with direct surface analysis by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Microbiol. Infect. 2012, 28:475-484.
12. Dupont C., Sivadon-Tardy V., Bille E., Dauphin B., Beretti J.L., Alvarez A.S., Degand N., Ferroni A., Rottman M., Herrmann J.L., Nassif X., Ronco E., Carbonnelle E. Identification of clinical coagulase-negative staphylococci, isolated in microbiology laboratories, by matrix-assisted laser desorption/ionization time of flight mass spectrometry and two automated systems. Clin. Microbiol. Infect. 2012, 16(7):998-1004.
13. Ferreira L., Sánchez-Juanes F., García-Fraile P., Rivas R., Mateos P.F., Martínez-Molina E., González-Buitrago J.M., Velázquez E. MALDI-TOF mass spectrometry is a fast and reliable platform for identification and ecological studies of species from family Rhizobiaceae. PLoS ONE 2011, 6(5):e20223.
14. Fiedler T., Sugareva V., Patenge N., Kreikemeyer B. Insights into streptococcus pyogenes pathogenesis from transcriptome studies. Future Microbiol. 2010, 5(11):1675-1694.
15. Ilina E.N., Borovskaya A.D., Malakhova M.M., Vereshchagin V.A., Kubanova A.A., Kruglov A.N., Svistunova T.S., Gazarian A.O., Maier T., Kostrzewa M., Govorun V.M. Direct bacterial profiling by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry for identification of pathogenic Neisseria. J. Mol. Diagn. 2009, 11(1):75-86.
16. Liu G. Acute pharyngitis, tonsillitis and scarlet fever caused by group A Streptococcus. J. Clin. Pediatr. 2006, 24:447-448.
17. Murugaiyan J., Ahrholdt J., Kowbel V., Roesler U. Establishment of a matrix-assisted laser desorption ionization time-of-flight mass spectrometry database for rapid identification of infectious achlorophyllous green micro-algae of the genus Prototheca. Clin. Microbiol. Infect. 2012, 18:461-467.
18. Mellmann A., Cloud J., Maier T., Keckevoet U., Ramminger I., Iwen P., Dunn J., Hall G., Wilson D., Lasala P., Kostrzewa M., Harmsen D. Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria. J. Clin. Microbiol. 2008, 46:1946-1954.
19. McShan W.M., Ferretti J.J., Karasawa T., Suvorov A.N., Lin S., Qin B., Jia H., Kenton S., Najar F., Wu H., Scott J., Roe B.A., Savic D.J. Genome sequence of a nephritogenic and highly transformable M49 strain of Streptococcus pyogenes. J. Bacteriol. 2008, 190(23):7773-7785.
20. Risch M., Radjenoyic D., Han J.N., Wydler M., Nydegger U., Risch L. Comparison of MALDI TOF with conyentional identification of clinically relevant bacteria. Swiss Med. Wkly. 2010, 140:w13095.
21. Smoot J.C., Barbian K.D., Van Gompel J.J., Smoot L.M., Chaussee M.S., Sylva G.L., Sturdevant D.E., Ricklefs S.M., Porcella S.F., Parkins L.D., Beres S.B., Campbell D.S., Smith T.M., Zhang Q., Kapur V., Daly J.A., Veasy L.G., Musser J.M. Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks. Proc. Natl. Acad. Sci. 2002, 99(7):4668-4673.
22. Saffert R.T., Cunningham S.A., Ihde S.M., Jobe K.E., Mandrekar J., Patel R. Comparison of Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometer to BD Phoenix automated microbiology system for identification of gram-negative bacilli. J. Clin. Microbiol. 2011, 49(3):887-892.
23. Seng P., Drancourt M., Gouriet F., La Scola B., Fournier P.E., Rolain J.M., Raoult D. Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Infect. Dis. 2009, 49:543-551.
24. Sparbier K., Weller U., Boogen C., Kostrzewa M. Rapid detection of Salmonella sp. by means of a combination of selective enrichment broth and MALDI-TOF MS. Eur. J. Clin. Microbiol. Infect. Dis. 2012, 31(5):767-773.
25. Szabados F., Woloszyn J., Kaase M. False-negative test results in the Slidex Staph Plus (bioMerieux) agglutination test are mainly caused by spa-type t001 and t001-related strains. Eur. J. Clin. Microbiol. Infect. Dis. 2011, 30:201-208.
26. Sogawa K., Watanabe M., Sato K., Segawa S., Ishii C., Miyabe A., Murata S., Saito T., Nomura F. Use of the MALDI BioTyper system with MALDI-TOF mass spectrometry for rapid identification of microorganisms. Anal. Bioanal. Chem. 2011, 400(7):1905-1911.
27. Tse H., Bao J.Y., Davies M.R., Maamary P., Tsoi H.W., Tong A.H., Ho T.C., Lin C.H., Gillen C.M., Barnett T.C., Chen J.H., Lee M., Yam W.C., Wong C.K., Ong C.L., Chan Y.W., Wu C.W., Ng T., Lim W.W., Tsang T.H., Tse C.W., Dougan G., Walker M.J., Lok S., Yuen K.Y. Molecular characterization of the 2011 hong kong scarlet fever outbreak. J. Infect Dis. 2012, 206(3):341-351.
28. Van Veen.S.Q., Claas E.C., Kuijper E.J. High-throughput identification of bacteria and yeast by matrix-assisted laser desorption ionization mass spectrometry in routine medical microbiology laboratory. J. Clin. Microbiol. 2010, 48:900-907.
29. Verroken A., Janssens M., Berhin C., Bogaerts P., Huang T.D., Wauters G., Glupczynski Y. Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of Nocardia species. J. Clin. Microbiol. 2010, 48(11):4015-4021.
30. Xiao D., Zhao F., Lv M., Zhang H.F., Zhang Y.C., Huang H., Su P., Zhang Z., Zhang J.Z. Rapid identification of microorganisms isolated from throat swab specimens of community-acquired pneumonia patients by two MALDI-TOF MS systems. Diagn. Microbiol. Infect Dis. 2012, 73(4):301-307.
31. Yan Y., He Y., Maier T., Quinn C., Shi G., Li H., Stratton C.W., Kostrzewa M., Tang Y.W. Improved identification of yeast species directly from positive blood culture media by combining sepsityper specimen processing and Microflex analysis with the matrix-assisted laser desorption ionization Biotypr system. J Clin Microbiol. 2011, 49(7):2528-2532.