-
1
-
-
14244272868
-
PHENIX: building new software for automated crystallographic structure determination
-
Adams P.D., Grosse-Kunstleve R.W., Hung L.W., Ioerger T.R., McCoy A.J., Moriarty N.W., Read R.J., Sacchettini J.C., Sauter N.K., Terwilliger T.C. PHENIX: building new software for automated crystallographic structure determination. Acta Crystallogr. D Biol. Crystallogr. 2002, 58:1948-1954.
-
(2002)
Acta Crystallogr. D Biol. Crystallogr.
, vol.58
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.W.3
Ioerger, T.R.4
McCoy, A.J.5
Moriarty, N.W.6
Read, R.J.7
Sacchettini, J.C.8
Sauter, N.K.9
Terwilliger, T.C.10
-
2
-
-
33745912405
-
A time- and cost-efficient system for high-level protein production in mammalian cells
-
Aricescu A.R., Lu W., Jones E.Y. A time- and cost-efficient system for high-level protein production in mammalian cells. Acta Crystallogr. D Biol. Crystallogr. 2006, 62:1243-1250.
-
(2006)
Acta Crystallogr. D Biol. Crystallogr.
, vol.62
, pp. 1243-1250
-
-
Aricescu, A.R.1
Lu, W.2
Jones, E.Y.3
-
3
-
-
57349090665
-
Very fast prediction and rationalization of pKa values for protein-ligand complexes
-
Bas D.C., Rogers D.M., Jensen J.H. Very fast prediction and rationalization of pKa values for protein-ligand complexes. Proteins 2008, 73:765-783.
-
(2008)
Proteins
, vol.73
, pp. 765-783
-
-
Bas, D.C.1
Rogers, D.M.2
Jensen, J.H.3
-
4
-
-
84858324994
-
Distinct roles in folding, CD81 receptor binding and viral entry for conserved histidine residues of hepatitis C virus glycoprotein E1 and E2
-
Boo I., teWierik K., Douam F., Lavillette D., Poumbourios P., Drummer H.E. Distinct roles in folding, CD81 receptor binding and viral entry for conserved histidine residues of hepatitis C virus glycoprotein E1 and E2. Biochem. J. 2012, 443:85-94.
-
(2012)
Biochem. J.
, vol.443
, pp. 85-94
-
-
Boo, I.1
teWierik, K.2
Douam, F.3
Lavillette, D.4
Poumbourios, P.5
Drummer, H.E.6
-
5
-
-
0035079046
-
Antiviral effect of N-butyldeoxynojirimycin against bovine viral diarrhea virus correlates with misfolding of E2 envelope proteins and impairment of their association into E1-E2 heterodimers
-
Branza-Nichita N., Durantel D., Carrouée-Durantel S., Dwek R.A., Zitzmann N. Antiviral effect of N-butyldeoxynojirimycin against bovine viral diarrhea virus correlates with misfolding of E2 envelope proteins and impairment of their association into E1-E2 heterodimers. J. Virol. 2001, 75:3527-3536.
-
(2001)
J. Virol.
, vol.75
, pp. 3527-3536
-
-
Branza-Nichita, N.1
Durantel, D.2
Carrouée-Durantel, S.3
Dwek, R.A.4
Zitzmann, N.5
-
6
-
-
84873106260
-
-
Global Phasing Ltd, Cambridge
-
Bricogne G., Blanc E., Brandl M., Flensburg C., Keller P., Paciorek W., Roversi P., Smart O.S., Vonrhein C., Womack T. BUSTER-TNT 2.5.1 and autoBUSTER 1.3.1 2008, Global Phasing Ltd, Cambridge.
-
(2008)
BUSTER-TNT 2.5.1 and autoBUSTER 1.3.1
-
-
Bricogne, G.1
Blanc, E.2
Brandl, M.3
Flensburg, C.4
Keller, P.5
Paciorek, W.6
Roversi, P.7
Smart, O.S.8
Vonrhein, C.9
Womack, T.10
-
7
-
-
0141456064
-
Bovine viral diarrhea virus as a surrogate model of hepatitis C virus for the evaluation of antiviral agents
-
Buckwold V.E., Beer B.E., Donis R.O. Bovine viral diarrhea virus as a surrogate model of hepatitis C virus for the evaluation of antiviral agents. Antiviral Res. 2003, 60:1-15.
-
(2003)
Antiviral Res.
, vol.60
, pp. 1-15
-
-
Buckwold, V.E.1
Beer, B.E.2
Donis, R.O.3
-
8
-
-
0024094649
-
Comparisons of the pestivirus bovine viral diarrhoea virus with members of the flaviviridae
-
Collett M.S., Anderson D.K., Retzel E. Comparisons of the pestivirus bovine viral diarrhoea virus with members of the flaviviridae. J. Gen. Virol. 1988, 69:2637-2643.
-
(1988)
J. Gen. Virol.
, vol.69
, pp. 2637-2643
-
-
Collett, M.S.1
Anderson, D.K.2
Retzel, E.3
-
9
-
-
34547592557
-
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
-
Web Server issue
-
Davis I.W., Leaver-Fay A., Chen V.B., Block J.N., Kapral G.J., Wang X., Murray L.W., Arendall W.B., Snoeyink J., Richardson J.S., Richardson D.C. MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res. 2007, 35(Web Server issue):W375-W383.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
-
10
-
-
23944482649
-
Challenges and successes in developing new therapies for hepatitis C
-
De Francesco R., Migliaccio G. Challenges and successes in developing new therapies for hepatitis C. Nature 2005, 436:953-960.
-
(2005)
Nature
, vol.436
, pp. 953-960
-
-
De Francesco, R.1
Migliaccio, G.2
-
11
-
-
34047137160
-
Mutagenesis of a conserved fusion peptide-like motif and membrane-proximal heptad-repeat region of hepatitis C virus glycoprotein E1
-
Drummer H.E., Boo I., Poumbourios P. Mutagenesis of a conserved fusion peptide-like motif and membrane-proximal heptad-repeat region of hepatitis C virus glycoprotein E1. J. Gen. Virol. 2007, 88:1144-1148.
-
(2007)
J. Gen. Virol.
, vol.88
, pp. 1144-1148
-
-
Drummer, H.E.1
Boo, I.2
Poumbourios, P.3
-
12
-
-
0034849492
-
Study of the mechanism of antiviral action of iminosugar derivatives against bovine viral diarrhea virus
-
Durantel D., Branza-Nichita N., Carrouée-Durantel S., Butters T.D., Dwek R.A., Zitzmann N. Study of the mechanism of antiviral action of iminosugar derivatives against bovine viral diarrhea virus. J. Virol. 2001, 75:8987-8998.
-
(2001)
J. Virol.
, vol.75
, pp. 8987-8998
-
-
Durantel, D.1
Branza-Nichita, N.2
Carrouée-Durantel, S.3
Butters, T.D.4
Dwek, R.A.5
Zitzmann, N.6
-
14
-
-
0037444329
-
Proteomics computational analyses suggest that hepatitis C virus E1 and pestivirus E2 envelope glycoproteins are truncated class II fusion proteins
-
Garry R.F., Dash S. Proteomics computational analyses suggest that hepatitis C virus E1 and pestivirus E2 envelope glycoproteins are truncated class II fusion proteins. Virology 2003, 307:255-265.
-
(2003)
Virology
, vol.307
, pp. 255-265
-
-
Garry, R.F.1
Dash, S.2
-
15
-
-
0032961270
-
ESPript: analysis of multiple sequence alignments in PostScript
-
Gouet P., Courcelle E., Stuart D.I., Métoz F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 1999, 15:305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Métoz, F.4
-
16
-
-
77954288774
-
Dali server: conservation mapping in 3D
-
Web Server issue
-
Holm L., Rosenström P. Dali server: conservation mapping in 3D. Nucleic Acids Res. 2010, 38(Web Server issue):W545-W549.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Holm, L.1
Rosenström, P.2
-
17
-
-
0030704752
-
Inhibition of pestivirus infection in cell culture by envelope proteins E(rns) and E2 of classical swine fever virus: E(rns) and E2 interact with different receptors
-
Hulst M.M., Moormann R.J. Inhibition of pestivirus infection in cell culture by envelope proteins E(rns) and E2 of classical swine fever virus: E(rns) and E2 interact with different receptors. J. Gen. Virol. 1997, 78:2779-2787.
-
(1997)
J. Gen. Virol.
, vol.78
, pp. 2779-2787
-
-
Hulst, M.M.1
Moormann, R.J.2
-
18
-
-
84872109157
-
Expression, purification and crystallization of the ectodomain of the envelope glycoprotein E2 from Bovine viral diarrhoea virus
-
Published online December 15, 2012
-
Iourin O., Harlos K., El Omari K., Lu W., Kadlec J., Iqbal M., Meier C., Palmer A., Ian J., Brownlie J., Grimes J.M., et al. Expression, purification and crystallization of the ectodomain of the envelope glycoprotein E2 from Bovine viral diarrhoea virus. Acta Crystallogr. F 2012, Published online December 15, 2012. 10.1107/S1744309112049184.
-
(2012)
Acta Crystallogr. F
-
-
Iourin, O.1
Harlos, K.2
El Omari, K.3
Lu, W.4
Kadlec, J.5
Iqbal, M.6
Meier, C.7
Palmer, A.8
Ian, J.9
Brownlie, J.10
Grimes, J.M.11
-
19
-
-
33749266195
-
The Role of histidine residues in low-pH-mediated viral membrane fusion
-
Kampmann T., Mueller D.S., Mark A.E., Young P.R., Kobe B. The Role of histidine residues in low-pH-mediated viral membrane fusion. Structure 2006, 14:1481-1487.
-
(2006)
Structure
, vol.14
, pp. 1481-1487
-
-
Kampmann, T.1
Mueller, D.S.2
Mark, A.E.3
Young, P.R.4
Kobe, B.5
-
20
-
-
29144497159
-
Class II virus membrane fusion proteins
-
Kielian M. Class II virus membrane fusion proteins. Virology 2006, 344:38-47.
-
(2006)
Virology
, vol.344
, pp. 38-47
-
-
Kielian, M.1
-
21
-
-
31344432402
-
Virus membrane-fusion proteins: more than one way to make a hairpin
-
Kielian M., Rey F.A. Virus membrane-fusion proteins: more than one way to make a hairpin. Nat. Rev. Microbiol. 2006, 4:67-76.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 67-76
-
-
Kielian, M.1
Rey, F.A.2
-
22
-
-
15244344835
-
Acid-resistant bovine pestivirus requires activation for pH-triggered fusion during entry
-
Krey T., Thiel H.J., Rümenapf T. Acid-resistant bovine pestivirus requires activation for pH-triggered fusion during entry. J. Virol. 2005, 79:4191-4200.
-
(2005)
J. Virol.
, vol.79
, pp. 4191-4200
-
-
Krey, T.1
Thiel, H.J.2
Rümenapf, T.3
-
23
-
-
84861041347
-
Crystal structure of the pestivirus envelope glycoprotein E(rns) and mechanistic analysis of its ribonuclease activity
-
Krey T., Bontems F., Vonrhein C., Vaney M.C., Bricogne G., Rümenapf T., Rey F.A. Crystal structure of the pestivirus envelope glycoprotein E(rns) and mechanistic analysis of its ribonuclease activity. Structure 2012, 20:862-873.
-
(2012)
Structure
, vol.20
, pp. 862-873
-
-
Krey, T.1
Bontems, F.2
Vonrhein, C.3
Vaney, M.C.4
Bricogne, G.5
Rümenapf, T.6
Rey, F.A.7
-
24
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., et al. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
-
25
-
-
70349973419
-
Mutagenesis of the fusion peptide-like domain of hepatitis C virus E1 glycoprotein: involvement in cell fusion and virus entry
-
Li H.F., Huang C.H., Ai L.S., Chuang C.K., Chen S.S. Mutagenesis of the fusion peptide-like domain of hepatitis C virus E1 glycoprotein: involvement in cell fusion and virus entry. J. Biomed. Sci. 2009, 16:89.
-
(2009)
J. Biomed. Sci.
, vol.16
, pp. 89
-
-
Li, H.F.1
Huang, C.H.2
Ai, L.S.3
Chuang, C.K.4
Chen, S.S.5
-
26
-
-
78649891889
-
Structural changes of envelope proteins during alphavirus fusion
-
Li L., Jose J., Xiang Y., Kuhn R.J., Rossmann M.G. Structural changes of envelope proteins during alphavirus fusion. Nature 2010, 468:705-708.
-
(2010)
Nature
, vol.468
, pp. 705-708
-
-
Li, L.1
Jose, J.2
Xiang, Y.3
Kuhn, R.J.4
Rossmann, M.G.5
-
27
-
-
79959769528
-
Identification of host cell binding peptide from an overlapping peptide library for inhibition of classical swine fever virus infection
-
Li X., Wang L., Zhao D., Zhang G., Luo J., Deng R., Yang Y. Identification of host cell binding peptide from an overlapping peptide library for inhibition of classical swine fever virus infection. Virus Genes 2011, 43:33-40.
-
(2011)
Virus Genes
, vol.43
, pp. 33-40
-
-
Li, X.1
Wang, L.2
Zhao, D.3
Zhang, G.4
Luo, J.5
Deng, R.6
Yang, Y.7
-
28
-
-
0037650057
-
The envelope glycoprotein E2 is a determinant of cell culture tropism in ruminant pestiviruses
-
Liang D., Sainz I.F., Ansari I.H., Gil L.H., Vassilev V., Donis R.O. The envelope glycoprotein E2 is a determinant of cell culture tropism in ruminant pestiviruses. J. Gen. Virol. 2003, 84:1269-1274.
-
(2003)
J. Gen. Virol.
, vol.84
, pp. 1269-1274
-
-
Liang, D.1
Sainz, I.F.2
Ansari, I.H.3
Gil, L.H.4
Vassilev, V.5
Donis, R.O.6
-
29
-
-
84872112636
-
-
Lippincott Williams & Wilkins, Philadelphia, PA
-
Lindenbach B.D., Rice C.M. The Pestiviruses 2001, Volume 1. Lippincott Williams & Wilkins, Philadelphia, PA.
-
(2001)
The Pestiviruses
, vol.1
-
-
Lindenbach, B.D.1
Rice, C.M.2
-
30
-
-
0842304523
-
CD46 is a cellular receptor for bovine viral diarrhea virus
-
Maurer K., Krey T., Moennig V., Thiel H.J., Rümenapf T. CD46 is a cellular receptor for bovine viral diarrhea virus. J. Virol. 2004, 78:1792-1799.
-
(2004)
J. Virol.
, vol.78
, pp. 1792-1799
-
-
Maurer, K.1
Krey, T.2
Moennig, V.3
Thiel, H.J.4
Rümenapf, T.5
-
31
-
-
0033375441
-
A model to estimate the financial consequences of classical swine fever outbreaks: principles and outcomes
-
Meuwissen M.P., Horst S.H., Huirne R.B., Dijkhuizen A.A. A model to estimate the financial consequences of classical swine fever outbreaks: principles and outcomes. Prev. Vet. Med. 1999, 42:249-270.
-
(1999)
Prev. Vet. Med.
, vol.42
, pp. 249-270
-
-
Meuwissen, M.P.1
Horst, S.H.2
Huirne, R.B.3
Dijkhuizen, A.A.4
-
32
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997, 276:307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
33
-
-
27744474818
-
The glycosylation pattern of baculovirus expressed envelope protein E2 affects its ability to prevent infection with bovine viral diarrhoea virus
-
Pande A., Carr B.V., Wong S.Y., Dalton K., Jones I.M., McCauley J.W., Charleston B. The glycosylation pattern of baculovirus expressed envelope protein E2 affects its ability to prevent infection with bovine viral diarrhoea virus. Virus Res. 2005, 114:54-62.
-
(2005)
Virus Res.
, vol.114
, pp. 54-62
-
-
Pande, A.1
Carr, B.V.2
Wong, S.Y.3
Dalton, K.4
Jones, I.M.5
McCauley, J.W.6
Charleston, B.7
-
34
-
-
0032582538
-
Binding of hepatitis C virus to CD81
-
Pileri P., Uematsu Y., Campagnoli S., Galli G., Falugi F., Petracca R., Weiner A.J., Houghton M., Rosa D., Grandi G., Abrignani S. Binding of hepatitis C virus to CD81. Science 1998, 282:938-941.
-
(1998)
Science
, vol.282
, pp. 938-941
-
-
Pileri, P.1
Uematsu, Y.2
Campagnoli, S.3
Galli, G.4
Falugi, F.5
Petracca, R.6
Weiner, A.J.7
Houghton, M.8
Rosa, D.9
Grandi, G.10
Abrignani, S.11
-
35
-
-
0034643316
-
The 1997-1998 epidemic of classical swine fever in the Netherlands
-
Stegeman A., Elbers A., de Smit H., Moser H., Smak J., Pluimers F. The 1997-1998 epidemic of classical swine fever in the Netherlands. Vet. Microbiol. 2000, 73:183-196.
-
(2000)
Vet. Microbiol.
, vol.73
, pp. 183-196
-
-
Stegeman, A.1
Elbers, A.2
de Smit, H.3
Moser, H.4
Smak, J.5
Pluimers, F.6
-
36
-
-
0018792428
-
Crystal structure of cat muscle pyruvate kinase at a resolution of 2.6 A
-
Stuart D.I., Levine M., Muirhead H., Stammers D.K. Crystal structure of cat muscle pyruvate kinase at a resolution of 2.6 A. J. Mol. Biol. 1979, 134:109-142.
-
(1979)
J. Mol. Biol.
, vol.134
, pp. 109-142
-
-
Stuart, D.I.1
Levine, M.2
Muirhead, H.3
Stammers, D.K.4
-
37
-
-
0000560808
-
MOLREP: an automated program for molecular replacement
-
Vagin A., Teplyakov A. MOLREP: an automated program for molecular replacement. J. Appl. Crystallogr. 1997, 30:1022-1025.
-
(1997)
J. Appl. Crystallogr.
, vol.30
, pp. 1022-1025
-
-
Vagin, A.1
Teplyakov, A.2
-
38
-
-
7444268500
-
Characterization of classical swine fever virus entry by using pseudotyped viruses: E1 and E2 are sufficient to mediate viral entry
-
Wang Z., Nie Y., Wang P., Ding M., Deng H. Characterization of classical swine fever virus entry by using pseudotyped viruses: E1 and E2 are sufficient to mediate viral entry. Virology 2004, 330:332-341.
-
(2004)
Virology
, vol.330
, pp. 332-341
-
-
Wang, Z.1
Nie, Y.2
Wang, P.3
Ding, M.4
Deng, H.5
-
39
-
-
0025307406
-
Pestivirus glycoprotein which induces neutralizing antibodies forms part of a disulfide-linked heterodimer
-
Weiland E., Stark R., Haas B., Rümenapf T., Meyers G., Thiel H.J. Pestivirus glycoprotein which induces neutralizing antibodies forms part of a disulfide-linked heterodimer. J. Virol. 1990, 64:3563-3569.
-
(1990)
J. Virol.
, vol.64
, pp. 3563-3569
-
-
Weiland, E.1
Stark, R.2
Haas, B.3
Rümenapf, T.4
Meyers, G.5
Thiel, H.J.6
|