Using ontology visualization to understand annotations and reason about them

CEUR Workshop Proceedings

Volumn 222, Issue , 2006, Pages 21-29

  Dolan, Mary E ^a   Blake, Judith A ^a  

^a JACKSON LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL ENTITIES; BIOLOGICAL INFORMATION; BIOMEDICAL ONTOLOGIES; COMPLEX DATA; GRAPHICAL REPRESENTATIONS; HIGH THROUGHPUT EXPERIMENTS; MODEL ORGANISMS;

BIOINFORMATICS; KNOWLEDGE REPRESENTATION; VISUALIZATION;

SEARCH ENGINES;

EID: 84872952677     PISSN: 16130073     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (13)

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4. Dolan ME, Ni L, Camon E, and Blake JA. A procedure for assessing GO annotation consistency. Bioinformatics 2005, 21(Suppl 1):i136-i143.
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8. Hamosh A, Scott AF, Amberger JS, Bocchini CA and McKusick VA. Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Research. 2005, 33: D514-D517.
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10. Hayamizu TF, Mangan M, Corradi JP, Kadin JA and Ringwald M. The Adult Mouse Anatomical Dictionary: a tool for annotating and integrating data. Genome Biology 2005, 6:R29 1-8.
11. Baldock RA, Bard JB, Burger A, Burton N, Christiansen J, Feng G, Hill B, Houghton D, Kaufman M, Rao J, et al. EMAP and EMAGE: a framework for understanding spatially organized data. Neuroinformatics 2003, 1:309-325.
12. Hill DP, Begley DA, Finger JH, Hayamizu TF, McCright IJ, Smith CM, Beal JS, Corbani LE, Blake JA, Eppig JT, et al. The mouse Gene Expression Database (GXD): updates and enhancements. Nucleic Acids Res 2004, 32: D568-D571.
13. Smith CL, Goldsmith CW and Eppig JT. The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information. Genome Biology 2004, 6:R7 1-9.