Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data

BMC Medical Genomics

Volumn 6, Issue 1, 2013, Pages

  Hettne, Kristina M ^a,b,c   Boorsma, André ^d   Van Dartel, Dorien A M ^e,f   Goeman, Jelle J ^c   De Jong, Esther ^e,g   Piersma, Aldert H ^e,g   Stierum, Rob H ^d   Kleinjans, Jos C ^a   Kors, Jan A ^b  

^a MAASTRICHT UNIVERSITY   (Netherlands)

^b ERASMUS MEDICAL CENTER   (Netherlands)

^c LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

^d TNO   (Netherlands)

^e NATIONAL INSTITUTE FOR PUBLIC HEALTH AND THE ENVIRONMENT   (Netherlands)

^f WAGENINGEN UNIVERSITY   (Netherlands)

^g UTRECHT UNIVERSITY   (Netherlands)

Author keywords

Gene set analysis; Text mining; Toxicogenomics

Indexed keywords

6 DEISOPROPYLATRAZINE; BEZAFIBRATE; CIPROFIBRATE; CLOFIBRATE; CLOMAZONE; CYPROCONAZOLE; CYPRODINIL; DIFENOCONAZOLE; DINICONAZOLE; ETHAMETSULFURON METHYL; FENBUCONAZOLE; FENOFIBRATE; FLUAZIFOP P BUTYL; FLUDIOXONIL; GEMFIBROZIL; IPRODIONE; MANCOZEB; MEPIQUAT CHLORIDE; METHAM SODIUM; MYCLOBUTANIL; NITRAPYRIN; PIRINIXIC ACID; PPRIMETHANIL; PRIMISULFURON METHYL; TOXIC SUBSTANCE; TRIADIMENOL; TRIAZOLE DERIVATIVE; UNCLASSIFIED DRUG;

ARTICLE; COMPARATIVE TOXICOGENOMICS DATABASE; CONNECTIVITY MAPPING; CONTROLLED STUDY; DATA BASE; DATA PROCESSING; EMBRYONIC STRUCTURES; GENE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE INACTIVATION; HUMAN; HUMAN CELL; MOUSE; NEXT GENERATION TEXT MINING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; TOXICOGENETICS; WHOLE EMBRYO CULTURE;

ANIMALS; CHOLECALCIFEROL; DATA MINING; DATABASES, FACTUAL; DIOXINS; DISCRIMINANT ANALYSIS; EPITHELIAL CELLS; ESTRADIOL; GENE EXPRESSION PROFILING; HUMANS; LIVER; MICE; MYOCYTES, SMOOTH MUSCLE; PPAR ALPHA; PRINCIPAL COMPONENT ANALYSIS; THYMUS GLAND; TOXICOGENETICS; TRIAZOLES; ZINC SULFATE;

EID: 84872911013     PISSN: None     EISSN: 17558794     Source Type: Journal    
DOI: 10.1186/1755-8794-6-2     Document Type: Article

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