메뉴 건너뛰기




Volumn 29, Issue 2, 2013, Pages 286-289

Bioclipse-R: Integrating management and visualization of life science data with statistical analysis

Author keywords

[No Author keywords available]

Indexed keywords

ANTINEOPLASTIC AGENT;

EID: 84872575364     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts681     Document Type: Article
Times cited : (6)

References (22)
  • 1
    • 72949101619 scopus 로고    scopus 로고
    • Interpretation of nonlinear QSAR models applied to Ames mutagenicity data
    • Carlsson, L. et al. (2009) Interpretation of nonlinear QSAR models applied to Ames mutagenicity data. J. Chem. Inf. Model., 49, 2551-2558.
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 2551-2558
    • Carlsson, L.1
  • 3
    • 0038579386 scopus 로고    scopus 로고
    • The signature molecular descriptor: Part 1. Using extended valence sequences in QSAR and QSPR studies
    • Faulon, J. et al. (2003) The signature molecular descriptor: part 1. Using extended valence sequences in QSAR and QSPR studies. J. Chem. Inf. Comput. Sci., 43, 707-720.
    • (2003) J. Chem. Inf. Comput. Sci. , vol.43 , pp. 707-720
    • Faulon, J.1
  • 4
    • 28744458859 scopus 로고    scopus 로고
    • Bioconductor: Open software development for computational biology and bioinformatics
    • Gentleman, R.C. et al. (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biol., 5, R80.
    • (2004) Genome Biol. , vol.5
    • Gentleman, R.C.1
  • 5
    • 70349910465 scopus 로고    scopus 로고
    • Benchmark data set for in silico prediction of Ames muta-genicity
    • Hansen, K. et al. (2009) Benchmark data set for in silico prediction of Ames muta-genicity. J. Chem. Inf. Model., 49, 2077-2081.
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 2077-2081
    • Hansen, K.1
  • 6
    • 77957352833 scopus 로고    scopus 로고
    • Jmol- A paradigm shift in crystallographic visualization
    • Hanson, R.M. (2010) Jmol- A paradigm shift in crystallographic visualization. J. Appl. Crystallogr., 43 (5 Part 2), 1250-1260.
    • (2010) J. Appl. Crystallogr. , vol.43 , Issue.5 PART 2 , pp. 1250-1260
    • Hanson, R.M.1
  • 7
    • 78651287426 scopus 로고    scopus 로고
    • DrugBank 3.0: A comprehensive resource for 'omics' research on drugs
    • Knox, C. et al. (2011) DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Nucleic Acids Res., 39, D1035-D1041.
    • (2011) Nucleic Acids Res. , vol.39
    • Knox, C.1
  • 8
    • 0002024882 scopus 로고    scopus 로고
    • JChemPaint - Using the collaborative forces of the internet to develop a free editor for 2D chemical structures
    • Krause, S. et al. (2000) JChemPaint-using the collaborative forces of the internet to develop a free editor for 2D chemical structures. Molecules, 5, 93-98. (Pubitemid 38990174)
    • (2000) Molecules , vol.5 , Issue.1 , pp. 93-98
    • Krause, S.1    Willighagen, E.2    Steinbeck, C.3
  • 9
    • 0345040873 scopus 로고    scopus 로고
    • Classification and regression by randomForest
    • Liaw, A. and Wiener, M. (2002) Classification and regression by randomForest. R News, 2, 18-22.
    • (2002) R News , vol.2 , pp. 18-22
    • Liaw, A.1    Wiener, M.2
  • 11
    • 79961135005 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0
    • R Development Core Team. (2011) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0.
    • (2011) R: A Language and Environment for Statistical Computing
  • 12
    • 79952709519 scopus 로고    scopus 로고
    • PROC: An open-source package for R and S+ to analyze and compare ROC curves
    • Robin, X. et al. (2011) pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics, 12, 77.
    • (2011) BMC Bioinformatics , vol.12 , pp. 77
    • Robin, X.1
  • 13
    • 33749011163 scopus 로고    scopus 로고
    • The NCI60 human tumour cell line anticancer drug screen
    • DOI 10.1038/nrc1951, PII NRC1951
    • Shoemaker, R.H. (2006) The NCI60 human tumour cell line anticancer drug screen. Nat. Rev. Cancer, 6, 813-823. (Pubitemid 44450469)
    • (2006) Nature Reviews Cancer , vol.6 , Issue.10 , pp. 813-823
    • Shoemaker, R.H.1
  • 14
    • 33847772616 scopus 로고    scopus 로고
    • Bioclipse: An open source workbench for chemo-and bioinformatics
    • Spjuth, O. et al. (2007) Bioclipse: an open source workbench for chemo-and bioinformatics. BMC Bioinformatics, 8, 59.
    • (2007) BMC Bioinformatics , vol.8 , pp. 59
    • Spjuth, O.1
  • 15
    • 74049154443 scopus 로고    scopus 로고
    • Bioclipse 2: A scriptable integration platform for the life sciences
    • Spjuth, O. et al. (2009) Bioclipse 2: a scriptable integration platform for the life sciences. BMC Bioinformatics, 10, 397.
    • (2009) BMC Bioinformatics , vol.10 , pp. 397
    • Spjuth, O.1
  • 16
    • 77954978807 scopus 로고    scopus 로고
    • Towards interoperable and reproducible QSAR analyses: Exchange of datasets
    • Spjuth, O. et al. (2010) Towards interoperable and reproducible QSAR analyses: exchange of datasets. J. Cheminform., 2, 5.
    • (2010) J. Cheminform. , vol.2 , pp. 5
    • Spjuth, O.1
  • 17
    • 80051962255 scopus 로고    scopus 로고
    • Integrated decision support for assessing chemical liabilities
    • Spjuth, O. et al. (2011) Integrated decision support for assessing chemical liabilities. J. Chem. Inf. Model., 51, 1840-1847.
    • (2011) J. Chem. Inf. Model. , vol.51 , pp. 1840-1847
    • Spjuth, O.1
  • 18
    • 0037361967 scopus 로고    scopus 로고
    • The Chemistry Development Kit (CDK): An open-source java library for chemo-and bioinformatics
    • Steinbeck, C. et al. (2003) The Chemistry Development Kit (CDK): an open-source java library for chemo-and bioinformatics. J. Chem. Inf. Comput. Sci., 43, 493-500.
    • (2003) J. Chem. Inf. Comput. Sci. , vol.43 , pp. 493-500
    • Steinbeck, C.1
  • 19
    • 37249065124 scopus 로고    scopus 로고
    • Generating conformer ensembles using a multiobjective genetic algorithm
    • DOI 10.1021/Ci6005646
    • Vainio, M.J. and Johnson, M.S. (2007) Generating conformer ensembles using a multiobjective genetic algorithm. J. Chem. Inf. Model, 47, 2462-2474. (Pubitemid 350275111)
    • (2007) Journal of Chemical Information and Modeling , vol.47 , Issue.6 , pp. 2462-2474
    • Vainio, M.J.1    Johnson, M.S.2
  • 21
    • 84865126690 scopus 로고    scopus 로고
    • Scientific workflow systems: Pipeline pilot and KNIME
    • Warr, W.A. (2012) Scientific workflow systems: pipeline pilot and KNIME. J. Comput. Aided Mol. Des., 26, 801-804.
    • (2012) J. Comput. Aided Mol. Des. , vol.26 , pp. 801-804
    • Warr, W.A.1
  • 22
    • 84879984716 scopus 로고    scopus 로고
    • Linking the resource description framework to cheminformatics and proteochemometrics
    • Willighagen, E. et al. (2011) Linking the resource description framework to cheminformatics and proteochemometrics. J. Biomed. Semantics, 2 (Suppl. 1), S6.
    • (2011) J. Biomed. Semantics , vol.2 , Issue.SUPPL. 1
    • Willighagen, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.