Data Definition Ontology for clinical data integration and querying

Studies in Health Technology and Informatics

Volumn 180, Issue , 2012, Pages 38-42

  Assele Kama, Ariane ^a   Primadhanty, Audi ^a   Choquet, Rémy ^a   Teodoro, Douglas ^b   Enders, Frank ^c   Duclos, Catherine ^d   Jaulent, Marie Christine ^a  

^a INSERM   (France)

^b UNIVERSITY OF GENEVA   (Switzerland)

^c AVERBIS GMBH   (Germany)

^d UNIVERSITÉ PARIS 13   (France)

Author keywords

D2RQ; Database information model; Database integration and mapping; Ontology

Indexed keywords

BACTERIA; DATABASE SYSTEMS; DIGITAL STORAGE; INFORMATION THEORY; MAPPING; ONTOLOGY; QUERY PROCESSING; REVERSE ENGINEERING;

CONTROL AND MONITOR; D2RQ; DATABASE INFORMATION; DATABASE INTEGRATION; DOMAIN ONTOLOGIES; HETEROGENEOUS DATA; SCHEMA MAPPING APPROACH; SEMANTIC INTEROPERABILITY;

DATA INTEGRATION;

ARTICLE; CLASSIFICATION; DATA BASE; DATA MINING; DOCUMENTATION; ELECTRONIC MEDICAL RECORD; FACTUAL DATABASE; MEDICAL RECORD; METHODOLOGY; NATURAL LANGUAGE PROCESSING; NOMENCLATURE; SYSTEM ANALYSIS;

DATA MINING; DATABASE MANAGEMENT SYSTEMS; DATABASES, FACTUAL; DOCUMENTATION; ELECTRONIC HEALTH RECORDS; MEDICAL RECORDS; NATURAL LANGUAGE PROCESSING; SYSTEMS INTEGRATION; TERMINOLOGY AS TOPIC;

EID: 84872559193     PISSN: 09269630     EISSN: 18798365     Source Type: Book Series    
DOI: 10.3233/978-1-61499-101-4-38     Document Type: Conference Paper

References (18)

1. http://www.debugit.eu/ (last access May 2012)
2. http://www.ehr4cr.eu/ (last access May 2012)
3. Wache H, Vogele T, Visser U, Stuckenschmidt H, Schuster G, Neumann H, Hubner S. Ontologybased integration of information - a survey of existing approaches. In Stuckenschmidt H. ed. IJCAI-01 Workshop: Ontologies and Information Sharing. 2001; 108-117
4. Ghawi R, Cullot N. Database-to-Ontology Mapping Generation for Semantic Interoperability. Third International Workshop on Database Interoperability (InterDB 2007), held in conjunction with VLDB 2007. Vienna, Austria: 2007.
5. Schulz S, Schober D, Daniel C, Jaulent MC. Bridging the semantics gap between terminologies, ontologies, and information models. Stud Health Technol Inform. 2010; 160(Pt 2):1000-4
6. http://www.w3.org/RDF/ (last access May 2012)
7. Gomez-Pérez A, Fernandez-Lopez M, Corcho O. Ontology Development Methods and Methodologies. Ontological Engineering, Springer Verlag, 113-153. Madrid, Espagne. 2004.
8. Ding L, Kolari P, Ding Z, Avancha S, Finin T, Joshi A. Using Ontologies in the Semantic Web: A Survey. In TR-CS-05-07 UMBC. 2005.
9. Sahoo SS, Halb W, Hellmann S, Idehen K, Thibodeau T, Auer S, Sequeda J, Ezzat A. A Survey of Current Approaches for Mapping of Relational Databases to RDF. 2009.
10. Lovis C, Colaert D, Stroetmann VN. DebugIT for patient safety - improving the treatment with antibiotics through multimedia data mining of heterogeneous clinical data. Stud Health Technol Inform. 2008 ; 136: 641-6
11. http://www.w3.org/TR/rdf-sparql-query/ (last access May 2012)
12. http://www.whocc.no/atcddd/ (last access May 2012)
13. http://www.uniprot.org/taxonomy/ (last access May 2012)
14. Bizer C, Cyganiak R. D2R Server - Publishing Relational Datbases on the Semantic Web. Poster at the 5th International Semantic Web Conference (ISWC2006). 2006.
15. http://metadata-stds.org/11179/ (last access May 2012)
16. Cullot N, Ghawi R, Ytongnon K. DB2OWL: A Tool for Automatic Database-to-Ontology Mapping. Université de Bourgogne. 2007.
17. http://debugit3.spim.jussieu.fr/rules-ddo.html (last access May 2012)
18. http://d2rq.org/ (last access May 2012)