Light-mediated control of DNA transcription in yeast

Methods

Volumn 58, Issue 4, 2012, Pages 385-391

  Hughes, Robert M ^a   Bolger, Steven ^b   Tapadia, Hersh ^b   Tucker, Chandra L ^a,c  

^a DUKE UNIVERSITY   (United States)

^b Duke University   (United States)

^c UNIVERSITY OF COLORADO SCHOOL OF MEDICINE   (United States)

Author keywords

Cryptochrome; DNA transcription; Optogenetics; Photoreceptor; Phytochrome; Two hybrid

Indexed keywords

CRYPTOCHROME; LEXA PROTEIN; PHYTOCHROME;

ARTICLE; BLUE LIGHT; DNA TRANSCRIPTION; GENE INDUCTION; GENETIC TRANSCRIPTION; HOMOLOGOUS RECOMBINATION; IN VIVO STUDY; LIGHT; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN INTERACTION; RED LIGHT; REPORTER GENE; TWO HYBRID SYSTEM; YEAST;

ARABIDOPSIS PROTEINS; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; BETA-GALACTOSIDASE; CRYPTOCHROMES; DNA-BINDING PROTEINS; GALACTOKINASE; GENE EXPRESSION REGULATION, FUNGAL; GENES, REPORTER; LIGHT; PHYCOBILINS; PHYCOCYANIN; PHYTOCHROME B; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC; TWO-HYBRID SYSTEM TECHNIQUES;

EID: 84872383336     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.08.004     Document Type: Article

References (30)

1. Louvion J.F., Havaux-Copf B., Picard D. Gene 1993, 131(1):129-134.
2. Gossen M., Bujard H. Proc. Natl. Acad. Sci. USA 1992, 89(12):5547-5551.
3. Johnston M., Davis R.W. Mol. Cell. Biol. 1984, 4(8):1440-1448.
4. Ronicke V., Graulich W., Mumberg D., Muller R., Funk M. Methods Enzymol. 1997, 283:313-322.
5. Ideker T., Thorsson V., Ranish J.A., Christmas R., Buhler J., Eng J.K., Bumgarner R., Goodlett D.R., Aebersold R., Hood L. Science 2001, 292(5518):929-934.
6. Lashkari D.A., DeRisi J.L., McCusker J.H., Namath A.F., Gentile C., Hwang S.Y., Brown P.O., Davis R.W. Proc. Natl. Acad. Sci. USA 1997, 94(24):13057-13062.
7. Butt T.R., Sternberg E.J., Gorman J.A., Clark P., Hamer D., Rosenberg M., Crooke S.T. Proc. Natl. Acad. Sci. USA 1984, 81(11):3332-3336.
8. Labbe S., Thiele D.J. Methods Enzymol. 1999, 306:145-153.
9. Cherest H., Kerjan P., Surdin-Kerjan Y. Mol. Gen. Genet. 1987, 210(2):307-313.
10. Kerjan P., Cherest H., Surdin-Kerjan Y. Nucleic Acids Res. 1986, 14(20):7861-7871.
11. Sangsoda S., Cherest H., Surdin-Kerjan Y. Mol. Gen. Genet. 1985, 200(3):407-414.
12. Gossen M., Freundlieb S., Bender G., Muller G., Hillen W., Bujard H. Science 1995, 268(5218):1766-1769.
13. McIsaac R.S., Silverman S.J., McClean M.N., Gibney P.A., Macinskas J., Hickman M.J., Petti A.A., Botstein D. Mol. Biol. Cell 2011, 22(22):4447-4459.
14. Wishart J.A., Hayes A., Wardleworth L., Zhang N., Oliver S.G. Yeast 2005, 22(7):565-569.
15. Kennedy M.J., Hughes R.M., Peteya L.A., Schwartz J.W., Ehlers M.D., Tucker C.L. Nat. Methods 2010, 7(12):973-975.
16. Shimizu-Sato S., Huq E., Tepperman J.M., Quail P.H. Nat. Biotechnol. 2002, 20(10):1041-1044.
17. Yazawa M., Sadaghiani A.M., Hsueh B., Dolmetsch R.E. Nat. Biotechnol. 2009, 27(10):941-945.
18. Ohlendorf R., Vidavski R.R., Eldar A., Moffat K., Moglich A. J. Mol. Biol. 2012, 416(4):534-542.
19. Wang X., Chen X., Yang Y. Nat. Methods 2012, 9(3):266-269.
20. Bodvard K., Wrangborg D., Tapani S., Logg K., Sliwa P., Blomberg A., Kvarnstrom M., Kall M. Biochim. Biophys. Acta 2011, 1813(2):358-366.
21. Fields S., Song O. Nature 1989, 340(6230):245-246.
22. Ni M., Tepperman J.M., Quail P.H. Nature 1999, 400(6746):781-784.
23. James P., Halladay J., Craig E.A. Genetics 1996, 144(4):1425-1436.
24. Tucker C.L., Peteya L.A., Pittman A.M., Zhong J. Genetics 2009, 182(4):1377-1379.
25. Baugh L.R., Demodena J., Sternberg P.W. Science 2009, 324(5923):92-94.
26. Verma R., Annan R.S., Huddleston M.J., Carr S.A., Reynard G., Deshaies R.J. Science 1997, 278(5337):455-460.
27. Arciero D.M., Bryant D.A., Glazer A.N. J. Biol. Chem. 1988, 263(34):18343-18349.
28. Liu H., Yu X., Li K., Klejnot J., Yang H., Lisiero D., Lin C. Science 2008, 322(5907):1535-1539.
29. Sadowski I., Ma J., Triezenberg S., Ptashne M. Nature 1988, 335(6190):563-564.
30. Costanzo M., Nishikawa J.L., Tang X., Millman J.S., Schub O., Breitkreuz K., Dewar D., Rupes I., Andrews B., Tyers M. Cell 2004, 117(7):899-913.