Spoligotyping of multidrug-resistant Mycobacterium tuberculosis isolates in Ethiopia

International Journal of Tuberculosis and Lung Disease

Volumn 17, Issue 2, 2013, Pages

  Diriba, B ^a,b   Berkessa, T ^b,c   Mamo, G ^b   Tedla, Y ^d   Ameni, Gobena ^b  

^a ST PAUL S HOSPITAL MILLENNIUM MEDICAL COLLEGE   (Ethiopia)

^b ADDIS ABABA UNIVERSITY   (Ethiopia)

^c Sheki Health Centre   (Ethiopia)

^d St Peter TB Specialized Hospital   (Ethiopia)

Author keywords

Clustering; Drug resistance; Lineage; Recent transmission; Tuberculosis

Indexed keywords

TUBERCULOSTATIC AGENT;

ADOLESCENT; ADULT; ARTICLE; BACTERIAL STRAIN; BACTERIAL TRANSMISSION; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CONTROLLED STUDY; ETHIOPIA; EUROPEAN AMERICAN; FEMALE; GENOTYPE; HUMAN; MAJOR CLINICAL STUDY; MALE; MOLECULAR TYPING; MULTIDRUG RESISTANT TUBERCULOSIS; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PRIORITY JOURNAL;

ADOLESCENT; ADULT; BACTERIAL TYPING TECHNIQUES; CLUSTER ANALYSIS; DNA FINGERPRINTING; DNA, BACTERIAL; ETHIOPIA; FEMALE; GENOTYPE; HUMANS; MALE; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RETROSPECTIVE STUDIES; TUBERCULOSIS, MULTIDRUG-RESISTANT; YOUNG ADULT;

EID: 84872325640     PISSN: 10273719     EISSN: None     Source Type: Journal    
DOI: 10.5588/ijtld.12.0195     Document Type: Article

References (25)

1. World Health Organization. Global tuberculosis control: WHO report. WHO/HTM/TB/2010.7. Geneva, Switzerland: WHO, 2010.
2. Federal Ministry of Health, Tuberculosis Prevention and Control Programme. Annual bulletin. Addis Ababa, Ethiopia: FMOH, 2011.
3. World Health Organization. Multidrug and extensively drug-resistant TB (M/XDR-TB): 2010 global report on surveillance and response. WHO/HTM/TB/2010.3. Geneva, Switzerland: WHO, 2010.
4. Raviglione M C, Smith I M. XDR tuberculosis - implications for global public health. N Engl J Med 2007; 356: 656-659.
5. Weyer K. The management of multidrug-resistant tuberculosis in South Africa. 2nd ed. Pretoria, South Africa: Department of Health, Republic of South Africa, 1999.
6. World Health Organization. Global tuberculosis control: surveillance, planning and financing. WHO report. WHO/HTM/TB/2008.393. Geneva, Switzerland: WHO, 2008.
7. Federal Ministry of Health. Guide line for programme and clinical management of drug resistant tuberculosis. 1st ed. Addis Ababa, Ethiopia: FMOH, 2009.
8. World Health Organization. Towards universal access to diagnosis and treatment of multidrug-resistant and extensively drug-resistant tuberculosis by 2015: WHO progress report 2011. WHO/HTM/TB/2011.3. Geneva, Switzerland: WHO, 2011.
9. Van Soolingen D. Utility of molecular epidemiology of tuberculosis. Eur Respir J 1998; 11: 795-797. (Pubitemid 28231267)
10. Kamerbeek J L, Schouls A, Kolk M, et al. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 1997; 35: 907-914.
11. Goguet de la Salmoniere Y O, Li H M, Torrea G, Bunschoten A, van Embden J, Gicquel B. Evaluation of spoligotyping in a study of the transmission of Mycobacterium tuberculosis. J Clin Microbiol 1997; 35: 2210-2214. (Pubitemid 27349783)
12. Goyal M, Saunders N A, van Embden J D A, Young D B, Shaw R J. Differentiation of Mycobacterium tuberculosis isolates by spoligotyping and IS6110 restriction fragment length polymorphism. J Clin Microbiol 1997; 35: 647-651. (Pubitemid 27083854)
13. Diaz R, Kremer K, de Haas P E W, et al. Molecular epidemiology of tuberculosis in Cuba outside of Havana, July 1994-June 1995: utility of spoligotyping versus IS6110 restriction fragment length polymorphism. Int J Tuberc Lung Dis 1998; 2: 743-750.
14. Horgen L, Sola C, Devallois A, Goh K S, Rastogi N. Follow-up of Mycobacterium tuberculosis transmission in the French West Indies by IS6110-DNA fi ngerprinting and DR-based spoligotyping. FEMS Immunol Med Microbiol 1998; 21: 203-210.
15. Sola C, Horgen L, Devallois A, Rastogi N. Combined numerical analysis based on the molecular description of Mycobacterium tuberculosis by four repetitive sequence-based DNA typing systems. Res Microbiol 1998; 149: 349-360. (Pubitemid 28293896)
16. Haddad N, Masselot M, Durand B: Molecular differentiation of Mycobacterium bovis isolates. Review of main techniques and applications. Res Vet Sci 2004; 76: 1-18. (Pubitemid 38035528)
17. Parsons M L, Brosch R, Stewart T, et al. Rapid and simple approach for identification of Mycobacterium tuberculosis complex isolates by PCR-based genomic deletion analysis. J Clin Microbiol 2002; 40: 2339-2345. (Pubitemid 34747330)
18. Small P M, Hopewell P C, Singh S P. The epidemiology of tuberculosis in San Francisco. A population-based study using conventional and molecular methods. N Eng J Med 1994; 330: 1703-1709.
19. Luciani F, Francis R A, Tanaka M M. Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping. Infect Genet Evol 2008; 8: 182-190.
20. Sepkowitz K A, Friedman C R, Hafner A, et al. Tuberculosis among urban health care workers: a study using restriction fragment length polymorphism typing. Clin Infect Dis 1995; 21: 1098-1101.
21. Agonafir M, Lemma E, Wolde-Meskel D, et al. Phenotypic and genotypic analysis of multidrug-resistant tuberculosis in Ethiopia. Int J Tuberc Lung Dis 2010; 14: 1259-1265.
22. Brudey K, Driscoll R J, Rigouts L, et al. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol 2006; 6: 23.
23. Gagneuxa S, DeRiemer K, Van T, et al. Variable host-pathogen compatibility in Mycobacterium tuberculosis. J Microbiol 2006; 103: 2869-2873.
24. Grassberger P. Critical behavior of the general epidemic process and dynamical percolation. Math Biosci 1983; 63: 157-172. (Pubitemid 13085555)
25. Bruchfeld J, Aderaye G, Palme I B, et al. Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection. J Clin Microbiol 2002; 1636-1643. (Pubitemid 34493131)