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Volumn 11, Issue 1, 2013, Pages

Collectives of diagnostic biomarkers identify high-risk subpopulations of hematuria patients: Exploiting heterogeneity in large-scale biomarker data

Author keywords

biomarker; feature selection; hematuria; hierarchical clustering; proteinuria; Random Forests Classifier; risk stratification; urothelial cancer

Indexed keywords

BIOLOGICAL MARKER; C REACTIVE PROTEIN; CARCINOEMBRYONIC ANTIGEN; CREATININE; CYTOKERATIN 18; D DIMER; EPIDERMAL GROWTH FACTOR; GELATINASE B; HYALURONIDASE; INTERLEUKIN 1ALPHA; INTERLEUKIN 1BETA; INTERLEUKIN 2; INTERLEUKIN 4; INTERLEUKIN 6; INTERLEUKIN 8; MONOCYTE CHEMOTACTIC PROTEIN 1; NEURON SPECIFIC ENOLASE; PROSTATE SPECIFIC ANTIGEN; SOLUBLE TUMOR NECROSIS FACTOR RECEPTOR 1; SOLUBLE TUMOR NECROSIS FACTOR RECEPTOR 2; THROMBOMODULIN; TUMOR NECROSIS FACTOR ALPHA; TUMOR NECROSIS FACTOR RECEPTOR 1; TUMOR NECROSIS FACTOR RECEPTOR 2; UNCLASSIFIED DRUG; VASCULOTROPIN; VON WILLEBRAND FACTOR;

EID: 84872268345     PISSN: None     EISSN: 17417015     Source Type: Journal    
DOI: 10.1186/1741-7015-11-12     Document Type: Article
Times cited : (7)

References (30)
  • 1
    • 77149177963 scopus 로고    scopus 로고
    • Is it time to re-design the hematuria clinic?
    • 10.1111/j.1464-410X.2009.09108.x, 20002672
    • Mostafid H, Persad R, Kockelbergh R, Fawcett D. Is it time to re-design the hematuria clinic?. BJU Int 2010, 105:585-588. 10.1111/j.1464-410X.2009.09108.x, 20002672.
    • (2010) BJU Int , vol.105 , pp. 585-588
    • Mostafid, H.1    Persad, R.2    Kockelbergh, R.3    Fawcett, D.4
  • 2
    • 77954683305 scopus 로고    scopus 로고
    • Bladder cancer in 2010: how far have we come?
    • 10.3322/caac.20077, 20566675
    • Jacobs BL, Lee CT, Montie JE. Bladder cancer in 2010: how far have we come?. CA Cancer J Clin 2010, 60:244-272. 10.3322/caac.20077, 20566675.
    • (2010) CA Cancer J Clin , vol.60 , pp. 244-272
    • Jacobs, B.L.1    Lee, C.T.2    Montie, J.E.3
  • 4
    • 34848863373 scopus 로고    scopus 로고
    • Optimal management of high-risk T1G3 bladder cancer: a decision analysis
    • 10.1371/journal.pmed.0040284, 1989749, 17896857
    • Kulkarni GS, Finelli A, Fleshner NE, Jewett MA, Lopushinsky SR, Alibhai SM. Optimal management of high-risk T1G3 bladder cancer: a decision analysis. PLoS Med 2007, 4:e284. 10.1371/journal.pmed.0040284, 1989749, 17896857.
    • (2007) PLoS Med , vol.4
    • Kulkarni, G.S.1    Finelli, A.2    Fleshner, N.E.3    Jewett, M.A.4    Lopushinsky, S.R.5    Alibhai, S.M.6
  • 5
    • 71249136737 scopus 로고    scopus 로고
    • Cystoscopy revisited as the gold standard for detecting bladder cancer recurrence: diagnostic review bias in the randomized, prospective CEFUB trial
    • 10.1016/j.juro.2009.08.150, 19913254
    • van der Aa MN, Steyerberg EW, Bangma C, van Rhijn BW, Zwarthoff EC, van der Kwast TH. Cystoscopy revisited as the gold standard for detecting bladder cancer recurrence: diagnostic review bias in the randomized, prospective CEFUB trial. J Urol 2010, 183:76-80. 10.1016/j.juro.2009.08.150, 19913254.
    • (2010) J Urol , vol.183 , pp. 76-80
    • van der Aa, M.N.1    Steyerberg, E.W.2    Bangma, C.3    van Rhijn, B.W.4    Zwarthoff, E.C.5    van der Kwast, T.H.6
  • 6
    • 67349138615 scopus 로고    scopus 로고
    • Bladder cancer screening in a high risk asymptomatic population using a point of care urine based protein tumor marker
    • 10.1016/j.juro.2009.02.142, 19450825
    • Lotan Y, Elias K, Svatek RS, Bagrodia A, Nuss G, Moran B, Sagalowsky AI. Bladder cancer screening in a high risk asymptomatic population using a point of care urine based protein tumor marker. J Urol 2009, 182:52-57. 10.1016/j.juro.2009.02.142, 19450825.
    • (2009) J Urol , vol.182 , pp. 52-57
    • Lotan, Y.1    Elias, K.2    Svatek, R.S.3    Bagrodia, A.4    Nuss, G.5    Moran, B.6    Sagalowsky, A.I.7
  • 8
    • 0030727827 scopus 로고    scopus 로고
    • Rapid detection of bladder cancer: a comparative study of point of care tests
    • 10.1016/S0022-5347(01)68166-7, 9366321
    • Johnston B, Morales A, Emerson L, Lundie M. Rapid detection of bladder cancer: a comparative study of point of care tests. J Urol 1997, 158:2098-2101. 10.1016/S0022-5347(01)68166-7, 9366321.
    • (1997) J Urol , vol.158 , pp. 2098-2101
    • Johnston, B.1    Morales, A.2    Emerson, L.3    Lundie, M.4
  • 10
    • 24944558497 scopus 로고    scopus 로고
    • Polymorphisms in inflammation genes and bladder cancer: from initiation to recurrence, progression, and survival
    • 10.1200/JCO.2005.01.598, 16110031
    • Leibovici D, Grossman HB, Dinney CP, Millikan RE, Lerner S, Wang Y, Gu J, Dong Q, Wu X. Polymorphisms in inflammation genes and bladder cancer: from initiation to recurrence, progression, and survival. J Clin Oncol 2005, 23:5746-5756. 10.1200/JCO.2005.01.598, 16110031.
    • (2005) J Clin Oncol , vol.23 , pp. 5746-5756
    • Leibovici, D.1    Grossman, H.B.2    Dinney, C.P.3    Millikan, R.E.4    Lerner, S.5    Wang, Y.6    Gu, J.7    Dong, Q.8    Wu, X.9
  • 11
    • 78650253128 scopus 로고    scopus 로고
    • Stress proteins and cytokines are urinary biomarkers for diagnosis and staging of bladder cancer
    • 10.1016/j.eururo.2010.10.008, 20970244
    • Margel D, Pesvner-Fischer M, Baniel J, Yossepowitch O, Cohen IR. Stress proteins and cytokines are urinary biomarkers for diagnosis and staging of bladder cancer. Eur Urol 2011, 59:113-119. 10.1016/j.eururo.2010.10.008, 20970244.
    • (2011) Eur Urol , vol.59 , pp. 113-119
    • Margel, D.1    Pesvner-Fischer, M.2    Baniel, J.3    Yossepowitch, O.4    Cohen, I.R.5
  • 12
    • 71349087490 scopus 로고    scopus 로고
    • A unifying view of 21st century systems biology
    • 10.1016/j.febslet.2009.11.024, 19913537
    • Vidal M. A unifying view of 21st century systems biology. FEBS Lett 2009, 583:3891-3894. 10.1016/j.febslet.2009.11.024, 19913537.
    • (2009) FEBS Lett , vol.583 , pp. 3891-3894
    • Vidal, M.1
  • 13
    • 79958145357 scopus 로고    scopus 로고
    • Network biology: a direct approach to study biological function
    • 10.1002/wsbm.134, 21197659
    • Emmert-Streib F, Glazko GV. Network biology: a direct approach to study biological function. Wiley Interdiscip Rev Syst Biol Med 2011, 3:379-391. 10.1002/wsbm.134, 21197659.
    • (2011) Wiley Interdiscip Rev Syst Biol Med , vol.3 , pp. 379-391
    • Emmert-Streib, F.1    Glazko, G.V.2
  • 14
    • 0037230516 scopus 로고    scopus 로고
    • Towards complete and accurate reporting of studies of diagnostic accuracy: the STARD initiative. Standards for Reporting of Diagnostic Accuracy
    • 10.1373/49.1.1, 12507953, Standards for Reporting of Diagnostic Accuracy
    • Bossuyt PM, Reitsma JB, Bruns DE, Gatsonis CA, Glasziou PP, Irwig LM, Lijmer JG, Moher D, Rennie D, de Vet HC, . Standards for Reporting of Diagnostic Accuracy Towards complete and accurate reporting of studies of diagnostic accuracy: the STARD initiative. Standards for Reporting of Diagnostic Accuracy. Clin Chem 2003, 49:1-6. 10.1373/49.1.1, 12507953, Standards for Reporting of Diagnostic Accuracy.
    • (2003) Clin Chem , vol.49 , pp. 1-6
    • Bossuyt, P.M.1    Reitsma, J.B.2    Bruns, D.E.3    Gatsonis, C.A.4    Glasziou, P.P.5    Irwig, L.M.6    Lijmer, J.G.7    Moher, D.8    Rennie, D.9    de Vet, H.C.10
  • 15
    • 0037232979 scopus 로고    scopus 로고
    • The STARD statement for reporting studies of diagnostic accuracy: explanation and elaboration
    • 10.1373/49.1.7, 12507954, Standards for Reporting of Diagnostic Accuracy
    • Bossuyt PM, Reitsma JB, Bruns DE, Gatsonis CA, Glasziou PP, Irwig LM, Moher D, Rennie D, de Vet HC, Lijmer JG, . Standards for Reporting of Diagnostic Accuracy The STARD statement for reporting studies of diagnostic accuracy: explanation and elaboration. Clin Chem 2003, 49:7-18. 10.1373/49.1.7, 12507954, Standards for Reporting of Diagnostic Accuracy.
    • (2003) Clin Chem , vol.49 , pp. 7-18
    • Bossuyt, P.M.1    Reitsma, J.B.2    Bruns, D.E.3    Gatsonis, C.A.4    Glasziou, P.P.5    Irwig, L.M.6    Moher, D.7    Rennie, D.8    de Vet, H.C.9    Lijmer, J.G.10
  • 16
    • 34548359247 scopus 로고    scopus 로고
    • Urine proteomics: the present and future of measuring urinary protein components in disease
    • 10.1503/cmaj.061590, 1942114, 17698825
    • Barratt J, Topham P. Urine proteomics: the present and future of measuring urinary protein components in disease. CMAJ 2007, 177:361-368. 10.1503/cmaj.061590, 1942114, 17698825.
    • (2007) CMAJ , vol.177 , pp. 361-368
    • Barratt, J.1    Topham, P.2
  • 17
    • 23444449314 scopus 로고    scopus 로고
    • Development of a high-throughput automated analyzer using biochip array technology
    • 10.1373/clinchem.2005.049429, 15890889
    • Fitzgerald SP, Lamont JV, McConnell RI, Benchikh el O. Development of a high-throughput automated analyzer using biochip array technology. Clin Chem 2005, 51:1165-1176. 10.1373/clinchem.2005.049429, 15890889.
    • (2005) Clin Chem , vol.51 , pp. 1165-1176
    • Fitzgerald, S.P.1    Lamont, J.V.2    McConnell, R.I.3    Benchikh el, O.4
  • 19
    • 0030211964 scopus 로고    scopus 로고
    • Bagging predictors
    • Breiman L. Bagging predictors. Machine Learning 1996, 24:123-140.
    • (1996) Machine Learning , vol.24 , pp. 123-140
    • Breiman, L.1
  • 21
    • 84891731965 scopus 로고    scopus 로고
    • Haematuria guidelines
    • Haematuria guidelines. , http://www.baus.org.uk/AboutBAUS/publications/haematuria-guidelines
  • 23
    • 83755228827 scopus 로고    scopus 로고
    • Acute kidney injury biomarkers: renal angina and the need for a renal troponin I
    • 10.1186/1741-7015-9-135, 3287120, 22189039
    • Goldstein SL. Acute kidney injury biomarkers: renal angina and the need for a renal troponin I. BMC Med 2011, 9:135. 10.1186/1741-7015-9-135, 3287120, 22189039.
    • (2011) BMC Med , vol.9 , pp. 135
    • Goldstein, S.L.1
  • 24
    • 41149144686 scopus 로고    scopus 로고
    • Neutrophil gelatinase-associated lipocalin (NGAL) is a predictor of poor prognosis in human primary breast cancer
    • 10.1007/s10549-007-9619-3, 17554627
    • Bauer M, Eickhoff JC, Gould MN, Mundhenke C, Maass N, Friedl A. Neutrophil gelatinase-associated lipocalin (NGAL) is a predictor of poor prognosis in human primary breast cancer. Breast Cancer Res Treat 2008, 108:389-397. 10.1007/s10549-007-9619-3, 17554627.
    • (2008) Breast Cancer Res Treat , vol.108 , pp. 389-397
    • Bauer, M.1    Eickhoff, J.C.2    Gould, M.N.3    Mundhenke, C.4    Maass, N.5    Friedl, A.6
  • 26
    • 67650447331 scopus 로고    scopus 로고
    • EGFR pathway polymorphisms and bladder cancer susceptibility and prognosis
    • 10.1093/carcin/bgp077, 2704279, 19372140
    • Mason RA, Morlock EV, Karagas MR, Kelsey KT, Marsit CJ, Schned AR, Andrew AS. EGFR pathway polymorphisms and bladder cancer susceptibility and prognosis. Carcinogenesis 2009, 30:1155-1160. 10.1093/carcin/bgp077, 2704279, 19372140.
    • (2009) Carcinogenesis , vol.30 , pp. 1155-1160
    • Mason, R.A.1    Morlock, E.V.2    Karagas, M.R.3    Kelsey, K.T.4    Marsit, C.J.5    Schned, A.R.6    Andrew, A.S.7
  • 27
    • 84890122240 scopus 로고    scopus 로고
    • Statistical challenges in the development and evaluation of marker-based clinical tests
    • 10.1186/1741-7015-10-52, 3379945, 22642713
    • McShane LM. Statistical challenges in the development and evaluation of marker-based clinical tests. BMC Medicine 2012, 10:52. 10.1186/1741-7015-10-52, 3379945, 22642713.
    • (2012) BMC Medicine , vol.10 , pp. 52
    • McShane, L.M.1
  • 28
    • 79955077801 scopus 로고    scopus 로고
    • Revisiting the technical validation of tumour biomarker assays: how to open a Pandora's box
    • 10.1186/1741-7015-9-41, 3102629, 21504565
    • Marchio C, Dowsett M, Reis-Filho JS. Revisiting the technical validation of tumour biomarker assays: how to open a Pandora's box. BMC Medicine 2011, 9:41. 10.1186/1741-7015-9-41, 3102629, 21504565.
    • (2011) BMC Medicine , vol.9 , pp. 41
    • Marchio, C.1    Dowsett, M.2    Reis-Filho, J.S.3
  • 29
    • 84858061434 scopus 로고    scopus 로고
    • Assessing the value of diagnostic tests: a framework for designing and evaluating trials
    • 10.1136/bmj.e686, 22354600
    • Ferrante di Ruffano L, Hyde CJ, McCaffery KJ, Bossuyt PM, Deeks JJ. Assessing the value of diagnostic tests: a framework for designing and evaluating trials. BMJ 2012, 344:e686. 10.1136/bmj.e686, 22354600.
    • (2012) BMJ , vol.344
    • Ferrante di Ruffano, L.1    Hyde, C.J.2    McCaffery, K.J.3    Bossuyt, P.M.4    Deeks, J.J.5


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