Detection of Meloidogyne enterolobii in potatoes in South Africa and phylogenetic analysis based on intergenic region and the mitochondrial DNA sequences

European Journal of Plant Pathology

Volumn 136, Issue 1, 2013, Pages 1-5

  Onkendi, Edward M ^a   Moleleki, Lucy N ^a  

^a UNIVERSITY OF PRETORIA   (South Africa)

Author keywords

Emerging species; Meloidogyne spp.; mtDNA; rDNA region

Indexed keywords

CROP PROCESSING; CYTOCHROME; DISEASE RESISTANCE; GROWING SEASON; MITOCHONDRIAL DNA; NEMATODE; PHYLOGENETICS; PHYLOGENY; POTATO;

SOUTH AFRICA;

MELOIDOGYNE; MELOIDOGYNE ENTEROLOBII; MELOIDOGYNE JAVANICA; SOLANUM TUBEROSUM;

EID: 84872119462     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-012-0142-y     Document Type: Article

References (23)

1. Bezooijen, J. V. (2006). Methods and Techniques for Nematology (pp 25-26). Wageningen.
2. Blok, V. C., Phillips, M. S., & Fargette, M. (1997). Comparison of sequences from the ribosomal DNA intergenic region of Meloidogyne mayaguensis and other major tropical root-knot nematodes. Journal of Nematology, 29, 16-22.
3. Blok, V. C. (2005). Achievements in and future prospects for molecular diagnostics of plant-parasitic nematodes. Canadian Journal of Plant Pathology, 27, 176-185.
4. Blok, V. C. B., Wishart, J. W., Fargette, M. F., Berthier, K. B., & Phillips, M. S. P. (2002). Mitochondrial DNA differences distinguishing Meloidogyne mayaguensis from the major species of tropical root-knot nematodes. Nematology, 4, 773-781.
5. Brito, J., Powers, T. O., Mullin, P. G., Inserra, R. N., & Dickson, D. W. (2004). Morphological and molecular characterization of Meloidogyne mayaguensis isolates from Florida. Journal of Nematology, 36, 232-240.
6. Castagnone-Sereno, P., Esparrago, G., Abad, P., Leroy, F., & Bongiovanni, M. (1995). Satellite DNA as a target for PCR-specific detection of the plant-parasitic nematode Meloidogyne hapla. Current Genetics, 28, 566-570.
7. Castagnone-Sereno, P., Piotte, C., Uijthof, J., Abad, P., Wajnberg, E., Vanlerberghe-Masutti, F., Bongiovanni, M., & Dalmasso, A. (1993). Phylogenetic relationships between amphimictic and parthenogenetic nematodes of the genus Meloidogyne as inferred from repetitive DNA analysis. Heredity, 70, 195-204.
8. Cetintas, R., Kaur, R., Brito, J. A., Mendes, M. L., Nyczepir, A. P., & Dickson, D. W. (2007). Pathogenicity and reproductive potential of Meloidogyne mayaguensis and M. floridensis compared with three common Meloidogyne spp. Nematropica, 37, 21-32.
9. Conceição, I. L., Tzortzakakis, E. A., Gomes, P., Abrantes, I., & José, M. (2012). Detection of the root-knot nematode Meloidogyne ethiopica in Greece. European Journal of Plant Pathology, 134, 451-457.
10. De Waele, D., & Elsen, A. (2007). Challenges in tropical plant nematology. Annual Review of Phytopathology, 45, 457-485.
11. Hu, M. X., Zhuo, K., & Liao, J. L. (2011). Multiplex PCR for the simultaneous identification and detection of Meloidogyne incognita, M. enterolobii, and M. javanica using DNA extracted directly from individual galls. Phytopathology, 101, 1270-1277.
12. Katoh, K., Kuma, K., Toh, H., & Miyata, T. (2005). MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research, 33, 511-518.
13. Kiewnick, S., Dessimoz, M., & Franck, L. (2009). Effects of the Mi-1 and the N root-knot nematode-resistance gene on infection and reproduction of Meloidogyne enterolobii on tomato and pepper cultivars. Journal of Nematology, 41, 134-139.
14. Landa, B. B., Rius, J. E. P., Vovlas, N., Carneiro, R. M. D. G., Maleita, C. M. N., Abrantes, I. M. D. O., et al. (2008). Molecular characterization of Meloidogyne hispanica (Nematoda, Meloidogynidae) by phylogenetic analysis of genes within the rDNA in Meloidogyne spp. Plant Disease, 92, 1104-1110.
15. Lunt, D. H., Whipple, L. E., & Hyman, B. C. (1998). Mitochondrial DNA variable number tandem repeats (VNTRs): utility and problems in molecular ecology. Molecular Ecology, 7, 1441-1455.
16. McClure, M. A., Nischwitz, C., Skantar, A. M., Schmitt, M. E., & Subbotin, S. A. (2012). Root-knot nematodes in golf course greens of the western United States. Plant Disease, 96, 635-647.
17. OEPP/EPPO bulletin. (2011). Meloidogyne enterolobii. OEPP/EPPO Bulletin, 41, 329-339.
18. Posada, D., & Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics Application Note, 14, 817-818.
19. Powers, T. O., & Harris, T. S. (1993). A Polymerase chain reaction method for identification of five major Meloidogyne species. Journal of Nematology, 25, 1-6.
20. Tigano, M., Siqueira, K. D., Castagnone-sereno, P., Mulet, K., & Queiroz, P. (2010). Genetic diversity of the root-knot nematode Meloidogyne enterolobii and development of a SCAR marker for this guava-damaging species. Plant Pathology, 59, 1054-1061.
21. Tigano, M. S., Carneiro, R. M. D. G., Jeyaprakash, A., Dickson, D. W. D., & Adams, B. J. A. (2005). Phylogeny of Meloidogyne spp. based on 18S rDNA and the intergenic region of mitochondrial DNA sequences. Nematology, 7, 851-862.
22. Wesemael, W. M. L., Viaene, N., & Moens, M. (2011). Root-knot nematodes (Meloidogyne spp.) in Europe. Nematology, 13, 3-16.
23. Willers, P. (1997). First record of Meloidogyne mayaguensis Rammah and Hirschmann, 1988: Heteroderidae on commercial crops in the Mpumalanga province, South Africa. Instituut vir Tropiese en Subtropiese Gewasse, 294, 19-20.