Genome-wide association study of insect bite hypersensitivity in Dutch Shetland pony mares

Animal Genetics

Volumn 44, Issue 1, 2013, Pages 44-52

  Schurink, A ^a   Ducro, B J ^a   Bastiaansen, J W M ^a   Frankena, K ^a   Van Arendonk, J A M ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

genome wide association study; insect bite hypersensitivity; matched case control design

Indexed keywords

ANIMAL; ANIMAL DISEASE; ARTICLE; BIOLOGICAL MODEL; CASE CONTROL STUDY; CHROMOSOME; FEMALE; GENETIC ASSOCIATION; GENETICS; HORSE; HORSE DISEASE; HYPERSENSITIVITY; IMMUNOLOGY; INSECT BITE; NETHERLANDS; RISK; SINGLE NUCLEOTIDE POLYMORPHISM;

ANIMALS; CASE-CONTROL STUDIES; CHROMOSOMES, MAMMALIAN; FEMALE; GENOME-WIDE ASSOCIATION STUDY; HORSE DISEASES; HORSES; HYPERSENSITIVITY; INSECT BITES AND STINGS; MODELS, GENETIC; NETHERLANDS; ODDS RATIO; POLYMORPHISM, SINGLE NUCLEOTIDE;

ANIMALIA; EQUIDAE; HEXAPODA;

EID: 84872092430     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2012.02368.x     Document Type: Article

References (47)

1. Anderson G.S., Belton P., &, Kleider N., (1988) The hypersensitivity of horses to Culicoides bites in British Columbia. Canadian Veterinary Journal 29, 718-23.
2. Andersson L.S., Högström C., Mikko S., Eriksson S., Grandinson K., Broström H., Frey R., Sundquist M., &, Lindgren G., (2009) Polymorphisms in SPINK5 do not associate with insect bite hypersensitivity in Icelandic horses born in Sweden. Animal Genetics 40, 790-1.
3. Andersson L.S., Swinbune J.E., Meadows J.R.S., et al,. (2012) The same ELA class II risk factors confer equine insect bite hypersensitivity in two distinct populations. Immunogenetics 64, 201-8.
4. Aulchenko Y.S., Ripke S., Isaacs A., &, van Duijn C.M., (2007) GenABEL: an r library for genome-wide association analysis. Bioinformatics 23, 1294-6.
5. Bailey E., Marti E., Fraser D.G., Antczak D.F., &, Lazary S., (2000) Immunogenetics of the horse. In: The Genetics of the Horse (Ed. by, A.T. Bowling, &, A. Ruvinsky,), pp. 123-55. CABI Publishing, New York.
6. Baselgia S., Doherr M.G., Mellor P., Torsteinsdottir S., Jermann T., Zurbriggen A., Jungi T., &, Marti E., (2006) Evaluation of an in vitro sulphidoleukotriene release test for diagnosis of insect bite hypersensitivity in horses. Equine Veterinary Journal 38, 40-6.
7. Beavis W.D., (1998) QTL analyses: power, precision, and accuracy. In: Molecular Dissection of Complex Traits (Ed. by, A.H. Paterson,), pp. 145-62. CRC Press, New York.
8. Bertram L., McQueen M.B., Mullin K., Blacker D., &, Tanzi R.E., (2007) Systematic meta-analyses of Alzheimer disease genetic association studies: the AlzGene database. Nature Genetics 39, 17-23.
9. Braverman Y., Ungar-Waron H., Frith K., Adler H., Danieli Y., Baker K.P., &, Quinn P.J., (1983) Epidemiological and immunological studies of sweet itch in horses in Israel. Veterinary Record 112, 521-4.
10. Broström H., Larsson Å., &, Troedsson M., (1987) Allergic dermatitis (sweet itch) of Icelandic horses in Sweden: an epidemiological study. Equine Veterinary Journal 19, 229-36.
11. Chowdhary B.P., &, Raudsepp T., (2008) The horse genome derby: racing from map to whole genome sequence. Chromosome Research 16, 109-27.
12. Eder C., Curik I., Brem G., Crameri R., Bodo I., Habe F., Lazary S., Sölkner J., &, Marti E., (2001) Influence of environmental and genetic factors on allergen-specific immunoglobulin-E levels in sera from Lipizzan horses. Equine Veterinary Journal 33, 714-20.
13. Edwards B.J., Haynes C., Levenstien M.A., Finch S.J., &, Gordon D., (2005) Power and sample size calculations in the presence of phenotype errors for case/control genetic association studies. BMC Genetics 6, 18.
14. Eriksson S., Grandinson K., Fikse W.F., Lindberg L., Mikko S., Broström H., Frey R., Sundquist M., &, Lindgren G., (2008) Genetic analysis of insect bite hypersensitivity (summer eczema) in Icelandic horses. Animal 2, 360-5.
15. Fadok V.A., &, Greiner E.C., (1990) Equine insect hypersensitivity: skin test and biopsy results correlated with clinical data. Equine Veterinary Journal 22, 236-40.
16. Gilmour A.R., Cullis B.R., &, Thompson R., (2009) asreml Update: What's new in Release 3.00. VSN International Ltd., Hemel Hempstead, UK.
17. Gortel K., (1998) Equine parasitic hypersensitivity. A review. Equine Practice 20, 14-6.
18. Gower J.C., (1966) Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika 53, 325-8.
19. Halldõrsdõttir S., Lazary S., Gunnarsson E., &, Larsen H.J., (1991) Distribution of leucocyte antigens in Icelandic horses affected with summer eczema compared to non-affected horses. Equine Veterinary Journal 23, 300-2.
20. Hayes B., &, Goddard M., (2010) Genome-wide association and genomic selection in animal breeding. Genome 53, 876-83.
21. Hirschhorn J.N., &, Daly M.J., (2005) Genome-wide association studies for common diseases and complex traits. Nature Review Genetics 6, 95-108.
22. Hořín P., Smola J., Matiašovic J., et al,. (2004) Polymorphisms in equine immune response genes and their associations with infections. Mammalian Genome 15, 843-50.
23. Karlsson E.K., &, Lindblad-Toh K., (2008) Leader of the pack: gene mapping in dogs and other model organisms. Nature Review Genetics 9, 713-25.
24. Littlewood J.D., (1998) Incidence of recurrent seasonal pruritus ('sweet itch') in British and German shire horses. Veterinary Record 142, 66-7.
25. Marti E., Gerber H., &, Lazary S., (1992) On the genetic basis of equine allergic diseases: II. Insect bite dermal hypersensitivity. Equine Veterinary Journal 24, 113-7.
26. Marti E., Glowatzki-Mullis M.L., Curik I., Torsteinsdottir S., &, Binns M.M., (2005) Investigating the genetic background for insect bite hypersensitivity in Icelandic horses. 6th International Equine Gene Mapping Workshop, Dublin, Ireland.
27. McCarthy M.I., Abecasis G.R., Cardon L.R., Goldstein D.B., Little J., Ioannidis J.P.A., &, Hirschhorn J.N., (2008) Genome-wide association studies for complex traits: consensus, uncertainty and challenges. Nature Review Genetics 9, 356-69.
28. Meuwissen T.H.E., Hayes B.J., &, Goddard M.E., (2001) Prediction of total genetic value using genome-wide dense marker maps. Genetics 157, 1819-29.
29. Pearson T.A., &, Manolio T.A., (2008) How to interpret a genome-wide association study. Journal of the American Medical Association 299, 1335-44.
30. Pilsworth R.C., &, Knottenbelt D.C., (2004) Equine insect hypersensitivity. Equine Veterinary Education 16, 324-5.
31. Riek R.F., (1954) Studies on allergic dermatitis (Queensland Itch) of the horse: The aetiology of the disease. Australian Journal of Agricultural Research 5, 109-29.
32. Schmidt C.O., &, Kohlman T., (2008) When to use the odds ratio or the relative risk? International Journal of Public Health 53, 165-7.
33. Schurink A., van Grevenhof E.M., Ducro B.J., &, van Arendonk J.A.M., (2009) Heritability and repeatability of insect bite hypersensitivity in Dutch Shetland breeding mares. Journal of Animal Science 87, 484-90.
34. Schurink A., Vogelzang R.H., &, Ducro B.J., (2010) Relation between insect bite hypersensitivity and body condition score in Dutch Shetland mares. Proceedings of the 9th World Congress on Genetics Applied to Livestock Production, Leipzig, Germany, 1-6 August 2010.
35. Schurink A., Ducro B.J., Heuven H.C.M., &, van Arendonk J.A.M., (2011) Genetic parameters of insect bite hypersensitivity in Dutch Friesian broodmares. Journal of Animal Science 89, 1286-93.
36. Sloet van Oldruitenborgh-Oosterbaan M.M., van Poppel M., de Raat I.J., van den Boom R., &, Savelkoul H.F.J., (2009) Intradermal testing of horses with and without insect bite hypersensitivity in the Netherlands using an extract of native Culicoides species. Veterinary Dermatology 20, 607-14.
37. Steinman A., Peer G., &, Klement E., (2003) Epidemiological study of Culicoides hypersensitivity in horses in Israel. Veterinary Record 152, 748-51.
38. Storey J.D., &, Tibshirani R., (2003) Statistical significance for genome-wide experiments. Proceedings of the National Academy of Sciences 100, 9440-5.
39. Takken W., Verhulst N., Scholte E.-J., Jacobs F., Jongema Y., &, van Lammeren R., (2008) The phenology and population dynamics of Culicoides spp. in different ecosystems in The Netherlands. Preventive Veterinary Medicine 87, 41-54.
40. Unkel M., Simon D., Mayer M., &, Sommer H., (1987) Studies on the genetic basis of sweet itch in Island horses. Zeitschrift für Tierzüchtung und Züchtungsbiologie 104, 217-30 (in German).
41. Van den Boom R., Ducro B., &, Sloet van Oldruitenborgh-Oosterbaan M.M., (2008) Identification of factors associated with the development of insect bite hypersensitivity in horses in the Netherlands. Tijdschrift voor Diergeneeskunde 133, 554-9.
42. Van der Rijt R., Van den Boom R., Jongema Y., &, Sloet van Oldruitenborgh-Oosterbaan M.M., (2008) Culicoides species attracted to horses with and without insect hypersensitivity. Veterinary Journal 178, 91-7.
43. Wade C.M., Giulotto E., Sigurdsson S., et al,. (2009) Genome sequence, comparative analysis, and population genetics of the domestic horse. Science 326, 865-7.
44. Wagner B., Siebenkotten G., Radbruch A., &, Leibold W., (2001) Nucleotide sequence and restriction fragment length polymorphisms of the equine Cε gene. Veterinary Immunology and Immunopathology 82, 193-202.
45. Wagner B., Miller W.H., Morgan E.E., Hillegas J.M., Erb H.N., Leibold W., &, Antczak D.F., (2006) IgE and IgG antibodies in skin allergy of the horse. Veterinary Research 37, 813-25.
46. Wagner B., Childs B.A., &, Erb H.N., (2008) A histamine release assay to identify sensitisation to Culicoides allergens in horses with skin hypersensitivity. Veterinary Immunology and Immunopathology 126, 302-8.
47. Xu S., (2003) Theoretical basis of the Beavis effect. Genetics 165, 2259-68.