The Third ACGG-DB Meeting Report: Towards an international collaborative infrastructure for glycobioinformatics

Glycobiology

Volumn 23, Issue 2, 2013, Pages 144-146

  Aoki Kinoshita, Kiyoko F ^a   Sawaki, Hiromichi ^b   An, Hyun Joo ^c   Cho, Jin Won ^d   Hsu, Daniel ^e   Kato, Masaki ^f   Kawano, Shin ^g   Kawasaki, Toshisuke ^h   Khoo, Kay Hooi ⁱ   Kim, Jaehan ^c   Kim, Jin Dong ^g   Li, Xianyu ^j   Lütteke, Thomas ^k   Okuda, Shujiro ^h   Packer, Nicolle H ^l   Paulson, James C ^m   Raman, Rahul ⁿ   Ranzinger, René ^o   Shen, Huali ^p   Shikanai, Toshihide ^b   Yamada, Issaku ^q   Yang, Pengyuan ^p   Yamaguchi, Yoshiki ^f   Ying, Wantao ^j   Yoo, Jong Shin ^r   Zhang, Yang ^p   Narimatsu, Hisashi ^b   more..

^a SOKA UNIVERSITY   (Japan)

^b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^c Chungnam National University   (South Korea)

^d Yonsei University   (South Korea)

^e INSTITUTE OF BIOMEDICAL SCIENCES   (Taiwan)

^f RIKEN   (Japan)

^g Database Center for Life Science (DBCLS)   (Japan)

^h RITSUMEIKAN UNIVERSITY   (Japan)

ⁱ INSTITUTE OF BIOLOGICAL CHEMISTRY   (Taiwan)

^j BEIJING INSTITUTE OF RADIATION MEDICINE   (China)

^k JUSTUS LIEBIG UNIVERSITY   (Germany)

^l MACQUARIE UNIVERSITY   (Australia)

^m SCRIPPS RESEARCH INSTITUTE   (United States)

ⁿ MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^o UNIVERSITY OF GEORGIA   (United States)

^p FUDAN UNIVERSITY   (China)

^q NOGUCHI INSTITUTE   (Japan)

^r Korea Basic Science Institute (KBSI)   (South Korea)

more..

Author keywords

[No Author keywords available]

Indexed keywords

GLYCAN;

BIOINFORMATICS; BIOMEDICINE; BIOTECHNOLOGY; CONFERENCE PAPER; DATA BASE; GLYCOBIOLOGY; HUMAN; JAPAN; MEDICAL SOCIETY; PRIORITY JOURNAL; RESEARCH;

COMPUTATIONAL BIOLOGY; DATABASES, FACTUAL; HUMANS; POLYSACCHARIDES;

EID: 84871982282     PISSN: 09596658     EISSN: 14602423     Source Type: Journal    
DOI: 10.1093/glycob/cws167     Document Type: Conference Paper

References (14)

1. Akune Y, Hosoda M, Kaiya S, Shinmachi D, Aoki-Kinoshita KF. 2010. The RINGS resource for glycome informatics analysis and data mining on the Web. OMICS. 14(4): 475-86.
2. Campbell MP, Hayes CA, Struwe WB, Wilkins MR, Aoki-Kinoshita KF, Harvey DJ, Rudd PM, Kolarich D, Lisacek F, Karlsson NG, et al. 2011. UniCarbKB: putting the pieces together for glycomics research. Proteomics. 11(21): 4117-4121.
3. Deus HF, Veiga DF, Freire PR, Weinstein JN, Mills GB, Almeida JS. 2010. Exposing the cancer genome atlas as a SPARQL endpoint. J Biomed Inform. 43: 998-1008.
4. http://jcggdb.jp
5. http://www.monosaccharidedb.org
6. Kurata K. 2012. Transformation of information resource: Electronic journal. Journal of Information Processing and Management. 55: 366-369.
7. Lutteke T, Bohne-Lang A, Loss A, Goetz T, Frank M, von der Lieth C-W. 2006. GLYCOSCIENCES.de: an Internet portal to support glycomics and glycobiology research. Glycobiology. 16(5): 71R-81R.
8. Marshall MS, Boyce R, Deus HF, Zhao J, Willighagen EL, Samwald M, Pichler E, Hajagos J, Prud'hommeaux E, Stephens S. 2012. Emerging practices for mapping and linking life sciences data using RDF-A case series. J. Web Sem. 2-13.
9. Post LJG, Roos M, Marshall MS, van Driel R, Breit TM. 2007. A semantic web approach applied to integrative bioinformatics experimentation: a biological use case with genomics data. Bioinformatics. 23: 3080-3087.
10. Raman R, Venkataraman M, Ramakrishnan S, Lang W, Raguram S, Sasisekharan R. 2006. Advancing glycomics: implementation strategies at the consortium for functional glycomics. Glycobiology. 16(5): 82R-90R.
11. Ranzinger R, Frank M, von der Lieth C-W, Herget S: Glycome-DB.org. 2009. A portal for querying across the digital world of carbohydrate sequences. Glycobiology. 19(11): 1563-1567.
12. Shirokizawa Y, Takagi T. 2011. Towards the integration of databases in life science field: Establishment of National Bioscience Database Center (NBDC). Journal of Information Processing and Management. 54: 144-151.
13. Toukach PV. 2011. Bacterial carbohydrate structure database 3: principles and realization. Journal of Chemical Information and Modeling. 51(1): 159-170.
14. Tutton L. Untangling the semantic web: what does it mean for scholarly publications? The 8th SPARC Japan Seminar 2008. http://www.nii.ac.jp/sparc/ event/2008/pdf/121608/document/8th-4-Tutton-en.pdf.