메뉴 건너뛰기




Volumn 52, Issue 2, 2013, Pages 84-90

Divalent metal activation of a GH43 β-xylosidase

Author keywords

Xylosidase; Divalent cation; Hemicellulose; Multimerization

Indexed keywords

ACTIVE SITE; CATALYTIC MECHANISMS; CHEMICAL FEEDSTOCKS; D-GLUCOSE; DIVALENT CATION; DIVALENT METAL CATIONS; DIVALENT METALS; GLYCOSIDE HYDROLASES; HEMICELLULOSE; LIGNOCELLULOSIC BIOMASS; MIXED MICROBIAL CULTURE; MULTIMERIZATION; POTENTIAL SITES; SEDIMENTATION EQUILIBRIUM; SIDE-CHAINS; TEMPERATURE STABILITY; TRANSPORTATION FUELS; XYLOBIOSES; XYLOSIDASE;

EID: 84871704129     PISSN: 01410229     EISSN: 18790909     Source Type: Journal    
DOI: 10.1016/j.enzmictec.2012.10.010     Document Type: Article
Times cited : (27)

References (39)
  • 2
    • 33646059703 scopus 로고    scopus 로고
    • Xylanolytic enzymes
    • Marcel Dekker Inc., New York, J.R. Whitaker, A.G.J. Voragen, D.W.S. Wong (Eds.)
    • Biely P. Xylanolytic enzymes. Handbook of food enzymology 2003, 879-915. Marcel Dekker Inc., New York. J.R. Whitaker, A.G.J. Voragen, D.W.S. Wong (Eds.).
    • (2003) Handbook of food enzymology , pp. 879-915
    • Biely, P.1
  • 4
    • 84856254288 scopus 로고    scopus 로고
    • Cloning and characterization of two β-glucosidase/xylosidase enzymes from yak rumen metagenome
    • Bao L., Huang Q., Chang L., Sun Q., Zhou J., Lu H. Cloning and characterization of two β-glucosidase/xylosidase enzymes from yak rumen metagenome. Applied Biochemistry and Biotechnology 2012, 166:72-86.
    • (2012) Applied Biochemistry and Biotechnology , vol.166 , pp. 72-86
    • Bao, L.1    Huang, Q.2    Chang, L.3    Sun, Q.4    Zhou, J.5    Lu, H.6
  • 5
    • 58149172062 scopus 로고    scopus 로고
    • Biochemical characterization of a novel dual-function arabinofuranosidase/xylosidase isolated from a compost starter mixture
    • Wagschal K., Heng C., Lee C.C., Wong D.W.S. Biochemical characterization of a novel dual-function arabinofuranosidase/xylosidase isolated from a compost starter mixture. Applied Microbiology and Biotechnology 2009, 81:855-863.
    • (2009) Applied Microbiology and Biotechnology , vol.81 , pp. 855-863
    • Wagschal, K.1    Heng, C.2    Lee, C.C.3    Wong, D.W.S.4
  • 6
    • 43949083068 scopus 로고    scopus 로고
    • B-d-xylosidase from Selenomonas ruminantium: catalyzed reactions with natural and artificial substrates
    • Jordan D.B. B-d-xylosidase from Selenomonas ruminantium: catalyzed reactions with natural and artificial substrates. Applied Biochemistry and Biotechnology 2008, 146:137-149.
    • (2008) Applied Biochemistry and Biotechnology , vol.146 , pp. 137-149
    • Jordan, D.B.1
  • 7
    • 84857626431 scopus 로고    scopus 로고
    • Biochemical and kinetic characterization of GH43 β-d-xylosidase/α-l-arabinofuranosidase and GH30 α-l-arabinofuranosidase/β-d-xylosidase from rumen metagenome
    • Zhou J., Bao L., Chang L., Zhou Y., Lu H. Biochemical and kinetic characterization of GH43 β-d-xylosidase/α-l-arabinofuranosidase and GH30 α-l-arabinofuranosidase/β-d-xylosidase from rumen metagenome. Journal of Industrial Microbiology and Biotechnology 2012, 39:143-152.
    • (2012) Journal of Industrial Microbiology and Biotechnology , vol.39 , pp. 143-152
    • Zhou, J.1    Bao, L.2    Chang, L.3    Zhou, Y.4    Lu, H.5
  • 9
    • 84856233808 scopus 로고    scopus 로고
    • Catalytic properties of β-d-xylosidase XylBH43 from Bacillus halodurans C-125 and mutant XylBH43-W147G
    • Wagschal K., Jordan D.B., Braker J.D. Catalytic properties of β-d-xylosidase XylBH43 from Bacillus halodurans C-125 and mutant XylBH43-W147G. Process Biochemistry 2012, 47:366-372.
    • (2012) Process Biochemistry , vol.47 , pp. 366-372
    • Wagschal, K.1    Jordan, D.B.2    Braker, J.D.3
  • 10
    • 0029929874 scopus 로고    scopus 로고
    • Updating the sequence-based classification of glycosyl hydrolases
    • Henrissat B., Bairoch A. Updating the sequence-based classification of glycosyl hydrolases. Biochemical Journal 1996, 316:695-696.
    • (1996) Biochemical Journal , vol.316 , pp. 695-696
    • Henrissat, B.1    Bairoch, A.2
  • 12
    • 2442444140 scopus 로고    scopus 로고
    • Purification and characterization of thermostable xylanase and β-xylosidase by the thermophilic bacterium Bacillus thermantarcticus
    • Lama L., Calandrelli V., Gambacorta A., Nicolaus B. Purification and characterization of thermostable xylanase and β-xylosidase by the thermophilic bacterium Bacillus thermantarcticus. Research in Microbiology 2004, 155:283-289.
    • (2004) Research in Microbiology , vol.155 , pp. 283-289
    • Lama, L.1    Calandrelli, V.2    Gambacorta, A.3    Nicolaus, B.4
  • 13
    • 19944427947 scopus 로고    scopus 로고
    • Biochemical characterization and identification of the catalytic residues of a family 43 β-d-xylosidase from Geobacillus stearothermophilus T-6
    • Shallom D., Leon M., Bravman T., Ben-David A., Zaide G., Belakhov V., et al. Biochemical characterization and identification of the catalytic residues of a family 43 β-d-xylosidase from Geobacillus stearothermophilus T-6. Biochemistry 2005, 44:387-397.
    • (2005) Biochemistry , vol.44 , pp. 387-397
    • Shallom, D.1    Leon, M.2    Bravman, T.3    Ben-David, A.4    Zaide, G.5    Belakhov, V.6
  • 14
    • 0011852226 scopus 로고
    • Purification and characterization of a thermostable β-xylosidase from Thermomonospora fusca
    • Bachmann S.L., McCarthy A.J. Purification and characterization of a thermostable β-xylosidase from Thermomonospora fusca. Journal of General Microbiology 1989, 135:293-299.
    • (1989) Journal of General Microbiology , vol.135 , pp. 293-299
    • Bachmann, S.L.1    McCarthy, A.J.2
  • 15
    • 74049112196 scopus 로고    scopus 로고
    • Isolation and basic characterization of a β-glucosidase from a strain of Lactobacillus brevis isolated from a malolactic starter culture
    • Michlmayr H., Schumann C., da Silva N.M., Kulbe K.D., del Hierro A.M. Isolation and basic characterization of a β-glucosidase from a strain of Lactobacillus brevis isolated from a malolactic starter culture. Journal of Applied Microbiology 2010, 108:550-559.
    • (2010) Journal of Applied Microbiology , vol.108 , pp. 550-559
    • Michlmayr, H.1    Schumann, C.2    da Silva, N.M.3    Kulbe, K.D.4    del Hierro, A.M.5
  • 16
    • 33846128482 scopus 로고    scopus 로고
    • Gene cloning and expression in Escherichia coli of a bi-functional β-d-xylosidase/α-l-arabinosidase from Sulfolobus solfataricus involved in xylan degradation
    • Morana A., Paris O., Maurelli L., Rossi M., Cannio R. Gene cloning and expression in Escherichia coli of a bi-functional β-d-xylosidase/α-l-arabinosidase from Sulfolobus solfataricus involved in xylan degradation. Extremophiles 2007, 11:123-132.
    • (2007) Extremophiles , vol.11 , pp. 123-132
    • Morana, A.1    Paris, O.2    Maurelli, L.3    Rossi, M.4    Cannio, R.5
  • 18
    • 0025782660 scopus 로고
    • Purification and characterization of β-xylosidase from Aureobasidium pullulans
    • Dobberstein J., Emeis C.C. Purification and characterization of β-xylosidase from Aureobasidium pullulans. Applied Biochemistry and Biotechnology 1991, 35:210-215.
    • (1991) Applied Biochemistry and Biotechnology , vol.35 , pp. 210-215
    • Dobberstein, J.1    Emeis, C.C.2
  • 19
    • 68649096626 scopus 로고    scopus 로고
    • Catalytic properties of the immobilized Talaromyces thermophilus β-xylosidase and its use for xylose and xylooligosaccharides production
    • Guerfali M., Maalej I., Gargouri A., Belghith H. Catalytic properties of the immobilized Talaromyces thermophilus β-xylosidase and its use for xylose and xylooligosaccharides production. Journal of Molecular Catalysis B: Enzymatic 2009, 57:242-249.
    • (2009) Journal of Molecular Catalysis B: Enzymatic , vol.57 , pp. 242-249
    • Guerfali, M.1    Maalej, I.2    Gargouri, A.3    Belghith, H.4
  • 21
    • 0035430729 scopus 로고    scopus 로고
    • Cloning, sequencing, and expression of the gene encoding an intracellular β-d-xylosidase from Streptomyces thermoviolaceus OPC-520
    • Tsujibo H., Takada C., Tsuji A., Kosaka M., Miyamoto K., Inamori Y. Cloning, sequencing, and expression of the gene encoding an intracellular β-d-xylosidase from Streptomyces thermoviolaceus OPC-520. Bioscience, Biotechnology, and Biochemistry 2001, 65:1824-1831.
    • (2001) Bioscience, Biotechnology, and Biochemistry , vol.65 , pp. 1824-1831
    • Tsujibo, H.1    Takada, C.2    Tsuji, A.3    Kosaka, M.4    Miyamoto, K.5    Inamori, Y.6
  • 22
    • 0025089192 scopus 로고
    • Purification and characterization of an extracellular β-xylosidase from the rumen anaerobic fungus Neocallimastix frontalis
    • Hebraud M., Fevre M. Purification and characterization of an extracellular β-xylosidase from the rumen anaerobic fungus Neocallimastix frontalis. FEMS Microbiology Letters 1990, 72:11-16.
    • (1990) FEMS Microbiology Letters , vol.72 , pp. 11-16
    • Hebraud, M.1    Fevre, M.2
  • 23
    • 79952110930 scopus 로고    scopus 로고
    • New evidence for the role of calcium in the glycosidase reaction of GH43 arabinanases
    • de Sanctis D., Inacio J.M., Lindley P.F., de Sa-Nogueira I., Bento I. New evidence for the role of calcium in the glycosidase reaction of GH43 arabinanases. FEBS Journal 2010, 277:4562-4574.
    • (2010) FEBS Journal , vol.277 , pp. 4562-4574
    • de Sanctis, D.1    Inacio, J.M.2    Lindley, P.F.3    de Sa-Nogueira, I.4    Bento, I.5
  • 24
    • 84858597076 scopus 로고    scopus 로고
    • Functional association of catalytic and ancillary modules dictates enzymatic activity in glycoside hydrolase family 43 β-xylosidase
    • Morais S., Salama-Alber O., Barak Y., Hadar Y., Wilson D.B., Lamed R., et al. Functional association of catalytic and ancillary modules dictates enzymatic activity in glycoside hydrolase family 43 β-xylosidase. Journal of Biological Chemistry 2012, 287:9213-9221.
    • (2012) Journal of Biological Chemistry , vol.287 , pp. 9213-9221
    • Morais, S.1    Salama-Alber, O.2    Barak, Y.3    Hadar, Y.4    Wilson, D.B.5    Lamed, R.6
  • 26
    • 77952881793 scopus 로고    scopus 로고
    • Properties and applications of microbial β-d-xylosidases featuring the catalytically efficient enzyme from Selenomonas ruminantium
    • Jordan D.B., Wagschal K. Properties and applications of microbial β-d-xylosidases featuring the catalytically efficient enzyme from Selenomonas ruminantium. Applied Microbiology and Biotechnology 2010, 86:1647-1658.
    • (2010) Applied Microbiology and Biotechnology , vol.86 , pp. 1647-1658
    • Jordan, D.B.1    Wagschal, K.2
  • 27
    • 34548039761 scopus 로고    scopus 로고
    • Inhibition of the two-subsite β-d-xylosidase from Selenomonas ruminantium by sugars: competitive, noncompetitive, double binding, and slow binding modes
    • Jordan D.B., Braker J.D. Inhibition of the two-subsite β-d-xylosidase from Selenomonas ruminantium by sugars: competitive, noncompetitive, double binding, and slow binding modes. Archives of Biochemistry and Biophysics 2007, 465:231-246.
    • (2007) Archives of Biochemistry and Biophysics , vol.465 , pp. 231-246
    • Jordan, D.B.1    Braker, J.D.2
  • 28
    • 43949124808 scopus 로고    scopus 로고
    • Structure of the two-subsite β-d-xylosidase from Selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane
    • Brunzelle J.S., Jordan D.B., McCaslin D.R., Olczak A., Wawrzak Z. Structure of the two-subsite β-d-xylosidase from Selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane. Archives of Biochemistry and Biophysics 2008, 474:157-166.
    • (2008) Archives of Biochemistry and Biophysics , vol.474 , pp. 157-166
    • Brunzelle, J.S.1    Jordan, D.B.2    McCaslin, D.R.3    Olczak, A.4    Wawrzak, Z.5
  • 29
    • 84862820263 scopus 로고    scopus 로고
    • Isolation of α-glucuronidase enzyme from a rumen metagenomic library
    • Lee C.C., Kibblewhite R.E., Wagschal K., Li R., Orts W.J. Isolation of α-glucuronidase enzyme from a rumen metagenomic library. Protein Journal 2012, 31:206-211.
    • (2012) Protein Journal , vol.31 , pp. 206-211
    • Lee, C.C.1    Kibblewhite, R.E.2    Wagschal, K.3    Li, R.4    Orts, W.J.5
  • 33
    • 77957834477 scopus 로고    scopus 로고
    • Domain analysis of a modular α-l-arabinofuranosidase with a unique carbohydrate binding strategy from the fiber-degrading bacterium Fibrobacter succinogenes S85
    • Yoshida S., Hespen C.W., Beverly R.L., Mackie R.I., Cann I.K. Domain analysis of a modular α-l-arabinofuranosidase with a unique carbohydrate binding strategy from the fiber-degrading bacterium Fibrobacter succinogenes S85. Journal of Bacteriology 2010, 192:5424-5436.
    • (2010) Journal of Bacteriology , vol.192 , pp. 5424-5436
    • Yoshida, S.1    Hespen, C.W.2    Beverly, R.L.3    Mackie, R.I.4    Cann, I.K.5
  • 37
    • 80054742142 scopus 로고    scopus 로고
    • Opposing influences by subsite -1 and subsite +1 residues on relative xylopyranosidase/arabinofuranosidase activities of bifunctional β-d-xylosidase/α-l-arabinofuranosidase
    • Jordan D.B., Braker J.D. Opposing influences by subsite -1 and subsite +1 residues on relative xylopyranosidase/arabinofuranosidase activities of bifunctional β-d-xylosidase/α-l-arabinofuranosidase. BBA - Proteins and Proteomics 2011, 1814:1648-1657.
    • (2011) BBA - Proteins and Proteomics , vol.1814 , pp. 1648-1657
    • Jordan, D.B.1    Braker, J.D.2
  • 38
    • 34548249519 scopus 로고    scopus 로고
    • Variation in relative substrate specificity of bifunctional β-d-xylosidase/α-l-arabinofuranosidase by single-site mutations: roles of substrate distortion and recognition
    • Jordan D.B., Li X.L. Variation in relative substrate specificity of bifunctional β-d-xylosidase/α-l-arabinofuranosidase by single-site mutations: roles of substrate distortion and recognition. BBA - Proteins and Proteomics 2007, 1774:1192-1198.
    • (2007) BBA - Proteins and Proteomics , vol.1774 , pp. 1192-1198
    • Jordan, D.B.1    Li, X.L.2
  • 39
    • 0034682041 scopus 로고    scopus 로고
    • Cloning, sequencing, and characterization of the bifunctional xylosidase-arabinosidase from the anaerobic thermophile Thermoanaerobacter ethanolicus
    • Mai V., Wiegel J., Lorenz W.W. Cloning, sequencing, and characterization of the bifunctional xylosidase-arabinosidase from the anaerobic thermophile Thermoanaerobacter ethanolicus. Gene 2000, 247:137-143.
    • (2000) Gene , vol.247 , pp. 137-143
    • Mai, V.1    Wiegel, J.2    Lorenz, W.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.