-
1
-
-
84863393824
-
Chromothripsis and human disease: piecing together the shattering process
-
Maher CA, Wilson RK. Chromothripsis and human disease: piecing together the shattering process. Cell 2012, 148:29-32.
-
(2012)
Cell
, vol.148
, pp. 29-32
-
-
Maher, C.A.1
Wilson, R.K.2
-
2
-
-
84855396196
-
Evidence for transcript networks composed of chimeric RNAs in human cells
-
Djebali S, Lagarde J, Kapranov P, Lacroix V, Borel C, Mudge JM, Howald C, Foissac S, Ucla C, Chrast J, et al. Evidence for transcript networks composed of chimeric RNAs in human cells. PLoS One 2012, 7:e28213.
-
(2012)
PLoS One
, vol.7
-
-
Djebali, S.1
Lagarde, J.2
Kapranov, P.3
Lacroix, V.4
Borel, C.5
Mudge, J.M.6
Howald, C.7
Foissac, S.8
Ucla, C.9
Chrast, J.10
-
3
-
-
79952284127
-
Hallmarks of cancer: the next generation
-
Hanahan D, Weinberg RA. Hallmarks of cancer: the next generation. Cell 2011, 144:646-674.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
4
-
-
78651476339
-
Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing
-
Pflueger D, Terry S, Sboner A, Habegger L, Esgueva R, Lin PC, Svensson MA, Kitabayashi N, Moss BJ, MacDonald TY, et al. Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing. Genome Res 2011, 21:56-67.
-
(2011)
Genome Res
, vol.21
, pp. 56-67
-
-
Pflueger, D.1
Terry, S.2
Sboner, A.3
Habegger, L.4
Esgueva, R.5
Lin, P.C.6
Svensson, M.A.7
Kitabayashi, N.8
Moss, B.J.9
MacDonald, T.Y.10
-
5
-
-
62049085786
-
Transcriptome sequencing to detect gene fusions in cancer
-
Maher CA, Kumar-Sinha C, Cao X, Kalyana-Sundaram S, Han B, Jing X, Sam L, Barrette T, Palanisamy N, Chinnaiyan AM. Transcriptome sequencing to detect gene fusions in cancer. Nature 2009, 458:97-101.
-
(2009)
Nature
, vol.458
, pp. 97-101
-
-
Maher, C.A.1
Kumar-Sinha, C.2
Cao, X.3
Kalyana-Sundaram, S.4
Han, B.5
Jing, X.6
Sam, L.7
Barrette, T.8
Palanisamy, N.9
Chinnaiyan, A.M.10
-
6
-
-
68149176840
-
Chimeric transcript discovery by paired-end transcriptome sequencing
-
Maher CA, Palanisamy N, Brenner JC, Cao X, Kalyana-Sundaram S, Luo S, Khrebtukova I, Barrette TR, Grasso C, Yu J, et al. Chimeric transcript discovery by paired-end transcriptome sequencing. Proc Natl Acad Sci U S A 2009, 106:12353-12358.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 12353-12358
-
-
Maher, C.A.1
Palanisamy, N.2
Brenner, J.C.3
Cao, X.4
Kalyana-Sundaram, S.5
Luo, S.6
Khrebtukova, I.7
Barrette, T.R.8
Grasso, C.9
Yu, J.10
-
7
-
-
78651486046
-
Identification of fusion genes in breast cancer by paired-end RNA-sequencing
-
Edgren H, Murumagi A, Kangaspeska S, Nicorici D, Hongisto V, Kleivi K, Rye IH, Nyberg S, Wolf M, Borresen-Dale AL, Kallioniemi O. Identification of fusion genes in breast cancer by paired-end RNA-sequencing. Genome Biol 2011, 12:R6.
-
(2011)
Genome Biol
, vol.12
-
-
Edgren, H.1
Murumagi, A.2
Kangaspeska, S.3
Nicorici, D.4
Hongisto, V.5
Kleivi, K.6
Rye, I.H.7
Nyberg, S.8
Wolf, M.9
Borresen-Dale, A.L.10
Kallioniemi, O.11
-
8
-
-
34250334695
-
Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)
-
Ruan Y, Ooi HS, Choo SW, Chiu KP, Zhao XD, Srinivasan KG, Yao F, Choo CY, Liu J, Ariyaratne P, et al. Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs). Genome Res 2007, 17:828-838.
-
(2007)
Genome Res
, vol.17
, pp. 828-838
-
-
Ruan, Y.1
Ooi, H.S.2
Choo, S.W.3
Chiu, K.P.4
Zhao, X.D.5
Srinivasan, K.G.6
Yao, F.7
Choo, C.Y.8
Liu, J.9
Ariyaratne, P.10
-
9
-
-
60549092281
-
Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line
-
Zhao Q, Caballero OL, Levy S, Stevenson BJ, Iseli C, De Souza SJ, Galante PA, Busam D, Leversha MA, Chadalavada K, et al. Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line. Proc Natl Acad Sci U S A 2009, 106:1886-1891.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 1886-1891
-
-
Zhao, Q.1
Caballero, O.L.2
Levy, S.3
Stevenson, B.J.4
Iseli, C.5
De Souza, S.J.6
Galante, P.A.7
Busam, D.8
Leversha, M.A.9
Chadalavada, K.10
-
10
-
-
0033574524
-
Human acyl-CoA:cholesterol acyltransferase-1 (ACAT-1) gene organization and evidence that the 4.3-kilobase ACAT-1 mRNA is produced from two different chromosomes
-
Li BL, Li XL, Duan ZJ, Lee O, Lin S, Ma ZM, Chang CC, Yang XY, Park JP, Mohandas TK, et al. Human acyl-CoA:cholesterol acyltransferase-1 (ACAT-1) gene organization and evidence that the 4.3-kilobase ACAT-1 mRNA is produced from two different chromosomes. J Biol Chem 1999, 274:11060-11071.
-
(1999)
J Biol Chem
, vol.274
, pp. 11060-11071
-
-
Li, B.L.1
Li, X.L.2
Duan, Z.J.3
Lee, O.4
Lin, S.5
Ma, Z.M.6
Chang, C.C.7
Yang, X.Y.8
Park, J.P.9
Mohandas, T.K.10
-
11
-
-
4444280219
-
Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases
-
Hahn Y, Bera TK, Gehlhaus K, Kirsch IR, Pastan IH, Lee B. Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases. Proc Natl Acad Sci U S A 2004, 101:13257-13261.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 13257-13261
-
-
Hahn, Y.1
Bera, T.K.2
Gehlhaus, K.3
Kirsch, I.R.4
Pastan, I.H.5
Lee, B.6
-
12
-
-
77950941239
-
Detection of human interchromosomal trans-splicing in sequence databanks
-
Herai RH, Yamagishi ME. Detection of human interchromosomal trans-splicing in sequence databanks. Brief Bioinform 2010, 11:198-209.
-
(2010)
Brief Bioinform
, vol.11
, pp. 198-209
-
-
Herai, R.H.1
Yamagishi, M.E.2
-
13
-
-
51149114001
-
A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells
-
Li H, Wang J, Mor G, Sklar J. A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells. Science 2008, 321:1357-1361.
-
(2008)
Science
, vol.321
, pp. 1357-1361
-
-
Li, H.1
Wang, J.2
Mor, G.3
Sklar, J.4
-
14
-
-
51149101435
-
Medicine. The cart before the horse
-
Rowley JD, Blumenthal T. Medicine. The cart before the horse. Science 2008, 321:1302-1304.
-
(2008)
Science
, vol.321
, pp. 1302-1304
-
-
Rowley, J.D.1
Blumenthal, T.2
-
15
-
-
38049186458
-
RNA-mediated epigenetic programming of a genome-rearrangement pathway
-
Nowacki M, Vijayan V, Zhou Y, Schotanus K, Doak TG, Landweber LF. RNA-mediated epigenetic programming of a genome-rearrangement pathway. Nature 2008, 451:153-158.
-
(2008)
Nature
, vol.451
, pp. 153-158
-
-
Nowacki, M.1
Vijayan, V.2
Zhou, Y.3
Schotanus, K.4
Doak, T.G.5
Landweber, L.F.6
-
16
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 2007, 447:799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
Weng, Z.7
Snyder, M.8
Dermitzakis, E.T.9
Thurman, R.E.10
-
17
-
-
79957829805
-
DeFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data
-
McPherson A, Hormozdiari F, Zayed A, Giuliany R, Ha G, Sun MG, Griffith M, Heravi Moussavi A, Senz J, Melnyk N, et al. deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data. PLoS Comput Biol 2011, 7:e1001138.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
McPherson, A.1
Hormozdiari, F.2
Zayed, A.3
Giuliany, R.4
Ha, G.5
Sun, M.G.6
Griffith, M.7
Heravi Moussavi, A.8
Senz, J.9
Melnyk, N.10
-
18
-
-
84862826389
-
Chmp1A acts as a tumor suppressor gene that inhibits proliferation of renal cell carcinoma
-
You Z, Xin Y, Liu Y, Sun J, Zhou G, Gao H, Xu P, Chen Y, Chen G, Zhang L, et al. Chmp1A acts as a tumor suppressor gene that inhibits proliferation of renal cell carcinoma. Cancer Lett 2012, 319:190-196.
-
(2012)
Cancer Lett
, vol.319
, pp. 190-196
-
-
You, Z.1
Xin, Y.2
Liu, Y.3
Sun, J.4
Zhou, G.5
Gao, H.6
Xu, P.7
Chen, Y.8
Chen, G.9
Zhang, L.10
-
19
-
-
51849141402
-
Chmp1A functions as a novel tumor suppressor gene in human embryonic kidney and ductal pancreatic tumor cells
-
Li J, Belogortseva N, Porter D, Park M. Chmp1A functions as a novel tumor suppressor gene in human embryonic kidney and ductal pancreatic tumor cells. Cell Cycle 2008, 7:2886-2893.
-
(2008)
Cell Cycle
, vol.7
, pp. 2886-2893
-
-
Li, J.1
Belogortseva, N.2
Porter, D.3
Park, M.4
|