-
1
-
-
77249137168
-
Principles and challenges of genomewide DNA methylation analysis
-
Laird PW. Principles and challenges of genomewide DNA methylation analysis. Nat. Rev. Genet. 11, 191-203 (2010).
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 191-203
-
-
Laird, P.W.1
-
2
-
-
78049402859
-
Molecular signals of epigenetic states
-
Bonasio R, Tu S, Reinberg D. Molecular signals of epigenetic states. Science 330, 612-616 (2010).
-
(2010)
Science
, vol.330
, pp. 612-616
-
-
Bonasio, R.1
Tu, S.2
Reinberg, D.3
-
3
-
-
0018185292
-
Molecular basis of base substitution hotspots in Escherichia coli
-
Coulondre C, Miller JH, Farabaugh PJ, Gilbert W. Molecular basis of base substitution hotspots in Escherichia coli. Nature 274, 775-780 (1978). (Pubitemid 8406156)
-
(1978)
Nature
, vol.274
, Issue.5673
, pp. 775-780
-
-
Coulondre, C.1
Miller, J.H.2
Farabaugh, P.J.3
Gilbert, W.4
-
4
-
-
78149433116
-
Role of epigenetics in Alzheimer's and Parkinson's disease
-
Kwok JB. Role of epigenetics in Alzheimer's and Parkinson's disease. Epigenomics 2, 671-682 (2010).
-
(2010)
Epigenomics
, vol.2
, pp. 671-682
-
-
Kwok, J.B.1
-
5
-
-
84855961987
-
Epigenetic mechanisms in systemic lupus erythematosus and other autoimmune diseases
-
Hedrich CM, Tsokos GC. Epigenetic mechanisms in systemic lupus erythematosus and other autoimmune diseases. Trends Mol. Med. 17, 714-724 (2011).
-
(2011)
Trends Mol. Med.
, vol.17
, pp. 714-724
-
-
Hedrich, C.M.1
Tsokos, G.C.2
-
6
-
-
77956058729
-
Epigenetics and cardiovascular disease
-
Ordovas JM, Smith CE. Epigenetics and cardiovascular disease. Nat. Rev. Cardiol. 7, 510-519 (2010).
-
(2010)
Nat. Rev. Cardiol.
, vol.7
, pp. 510-519
-
-
Ordovas, J.M.1
Smith, C.E.2
-
7
-
-
84857443720
-
Cellular epigenetic stability and cancer
-
Sarkies P, Sale JE. Cellular epigenetic stability and cancer. Trends Genet. 28, 118-127 (2012).
-
(2012)
Trends Genet.
, vol.28
, pp. 118-127
-
-
Sarkies, P.1
Sale, J.E.2
-
8
-
-
34249275353
-
Phenotypic plasticity and the epigenetics of human disease
-
DOI 10.1038/nature05919, PII NATURE05919
-
Feinberg AP. Phenotypic plasticity and the epigenetics of human disease. Nature 447, 433-440 (2007). (Pubitemid 46816750)
-
(2007)
Nature
, vol.447
, Issue.7143
, pp. 433-440
-
-
Feinberg, A.P.1
-
9
-
-
82555191051
-
Cancer immunology -analysis of host and tumor factors for personalized medicine
-
Ogino S, Galon J, Fuchs CS, Dranoff G. Cancer immunology -analysis of host and tumor factors for personalized medicine. Nat. Rev. Clin. Oncol. 8, 711-719 (2011).
-
(2011)
Nat. Rev. Clin. Oncol.
, vol.8
, pp. 711-719
-
-
Ogino, S.1
Galon, J.2
Fuchs, C.S.3
Dranoff, G.4
-
10
-
-
77953469917
-
Epigenetics as a unifying principle in the aetiology of complex traits and diseases
-
Petronis A. Epigenetics as a unifying principle in the aetiology of complex traits and diseases. Nature 465, 721-727 (2010).
-
(2010)
Nature
, vol.465
, pp. 721-727
-
-
Petronis, A.1
-
11
-
-
0026005763
-
Estradiol down regulates the binding activity of an avian vitellogenin gene repressor (MDBP-2) and triggers a gradual demethylation of the mCpG pair of its DNA binding site
-
Jost JP, Saluz HP, Pawlak A. Estradiol down regulates the binding activity of an avian vitellogenin gene repressor (MDBP 2) and triggers a gradual demethylation of the mCpG pair of its DNA binding site. Nucleic Acids Res. 19, 5771-5775 (1991). (Pubitemid 21912987)
-
(1991)
Nucleic Acids Research
, vol.19
, Issue.20
, pp. 5771-5775
-
-
Jost, J.-P.1
Saluz, H.-P.2
Pawlak, A.3
-
12
-
-
0028966928
-
Sexually dimorphic DNA demethylation in the promoter of the Slp (sex-limited protein) gene in mouse liver
-
Yokomori N, Moore R, Negishi M. Sexually dimorphic DNA demethylation in the promoter of the Slp (sex-limited protein) gene in mouse liver. Proc. Natl Acad. Sci. USA 92, 1302-1306 (1995).
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 1302-1306
-
-
Yokomori, N.1
Moore, R.2
Negishi, M.3
-
14
-
-
0347123629
-
Early nutrition, epigenetic changes at transposons and imprinted genes, and enhanced susceptibility to adult chronic diseases
-
DOI 10.1016/j.nut.2003.09.011
-
Waterland RA, Jirtle RL. Early nutrition, epigenetic changes at transposons and imprinted genes, and enhanced susceptibility to adult chronic diseases. Nutrition 20, 63-68 (2004). (Pubitemid 38091581)
-
(2004)
Nutrition
, vol.20
, Issue.1
, pp. 63-68
-
-
Waterland, R.A.1
Jirtle, R.L.2
-
15
-
-
0027458127
-
Are somatic cells inherently deficient in methylation metabolism? A proposed mechanism for DNA methylation loss, senescence and aging
-
Cooney CA. Are somatic cells inherently deficient in methylation metabolism? A proposed mechanism for DNA methylation loss, senescence and aging. Growth. Dev. Aging 57, 261-273 (1993). (Pubitemid 23363343)
-
(1993)
Growth, Development and Aging
, vol.57
, Issue.4
, pp. 261-273
-
-
Cooney, C.A.1
-
16
-
-
0033988813
-
DNA methyltransferase Dnmt1 associates with histone deacetylase activity
-
DOI 10.1038/71750
-
Fuks F, Burgers WA, Brehm A, Hughes-Davies L, Kouzarides T. DNA methyltransferase Dnmt1 associates with histone deacetylase activity. Nat. Genet. 24, 88-91 (2000). (Pubitemid 30041428)
-
(2000)
Nature Genetics
, vol.24
, Issue.1
, pp. 88-91
-
-
Fuks, F.1
Burgers, W.A.2
Brehm, A.3
Hughes-Davies, L.4
Kouzarides, T.5
-
17
-
-
0038576158
-
The power and the promise of DNA methylation markers
-
Laird PW. The power and the promise of DNA methylation markers. Nat. Rev. Cancer 3, 253-266 (2003). (Pubitemid 37328861)
-
(2003)
Nature Reviews Cancer
, vol.3
, Issue.4
, pp. 253-266
-
-
Laird, P.W.1
-
18
-
-
79960556965
-
Epigenome-wide association studies for common human diseases
-
Rakyan VK, Down TA, Balding DJ, Beck S. Epigenome-wide association studies for common human diseases. Nat. Rev. Genet. 12, 529-541 (2011).
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 529-541
-
-
Rakyan, V.K.1
Down, T.A.2
Balding, D.J.3
Beck, S.4
-
19
-
-
84856306090
-
Genome-wide DNA methylation profiling using Infinium(R) assay
-
Bibikova M, Le J, Barnes B et al. Genome-wide DNA methylation profiling using Infinium(R) assay. Epigenomics 1, 177-200 (2009).
-
(2009)
Epigenomics
, vol.1
, pp. 177-200
-
-
Bibikova, M.1
Le Barnes J, B.2
-
20
-
-
78649969065
-
The DNA methylome of human peripheral blood mononuclear cells
-
Li Y, Zhu J, Tian G et al. The DNA methylome of human peripheral blood mononuclear cells. PLoS Biol. 8, e1000533 (2010).
-
(2010)
PLoS Biol.
, vol.8
-
-
Li, Y.1
Zhu, J.2
Tian, G.3
-
21
-
-
0026546877
-
A genomic sequencing protocol that yields a positive display of 5 methylcytosine residues in individual DNA strands
-
Frommer M, McDonald LE, Millar DS et al. A genomic sequencing protocol that yields a positive display of 5 methylcytosine residues in individual DNA strands. Proc. Natl Acad. Sci. USA 89, 1827-1831 (1992).
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 1827-1831
-
-
Frommer, M.1
McDonald, L.E.2
Millar, D.S.3
-
22
-
-
66449121652
-
Finding the fifth base: Genome-wide sequencing of cytosine methylation
-
Lister R, Ecker Jr. Finding the fifth base: genome-wide sequencing of cytosine methylation. Genome Res. 19, 959-966 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 959-966
-
-
Lister, R.1
Ecker, J.R.2
-
23
-
-
77957932941
-
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
-
Harris RA, Wang T, Coarfa C et al. Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications. Nat. Biotechnol. 28, 1097-1105 (2010).
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 1097-1105
-
-
Harris, R.A.1
Wang, T.2
Coarfa, C.3
-
24
-
-
59149084538
-
The human colon cancer methylome shows similar hypo-and hypermethylation at conserved tissue-specific CpG island shores
-
Irizarry RA, Ladd-Acosta C, Wen B et al. The human colon cancer methylome shows similar hypo-and hypermethylation at conserved tissue-specific CpG island shores. Nat. Genet. 41, 178-186 (2009).
-
(2009)
Nat. Genet.
, vol.41
, pp. 178-186
-
-
Irizarry, R.A.1
Ladd-Acosta, C.2
Wen, B.3
-
25
-
-
84865213776
-
Methylome-wide comparison of human genomic DNA extracted from whole blood and from EBV-transformed lymphocyte cell lines
-
Aberg K, Khachane AN, Rudolf G et al. Methylome-wide comparison of human genomic DNA extracted from whole blood and from EBV-transformed lymphocyte cell lines. Eur. J. Hum. Genet. 20(9), 953-955 (2012).
-
(2012)
Eur. J. Hum. Genet.
, vol.20
, Issue.9
, pp. 953-955
-
-
Aberg, K.1
Khachane, A.N.2
Rudolf, G.3
-
26
-
-
77449127799
-
MBD-isolated genome sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome
-
Serre D, Lee BH, Ting AH. MBD-isolated genome sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome. Nucleic Acids Res. 38, 391-399 (2010).
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 391-399
-
-
Serre, D.1
Lee, B.H.2
Ting, A.H.3
-
27
-
-
78049426840
-
DNA methylation profiling using HpaII tiny fragment enrichment by ligation-mediated PCR (HELP)
-
Suzuki M, Greally JM. DNA methylation profiling using HpaII tiny fragment enrichment by ligation-mediated PCR (HELP). Methods 52, 218-222 (2010).
-
(2010)
Methods
, vol.52
, pp. 218-222
-
-
Suzuki, M.1
Greally, J.M.2
-
28
-
-
61449426211
-
Methylated DNA immunoprecipitation (MeDIP)
-
Mohn F, Weber M, Schubeler D, Roloff TC. Methylated DNA immunoprecipitation (MeDIP). Methods Mol. Biol. 507, 55-64 (2009).
-
(2009)
Methods Mol. Biol.
, vol.507
, pp. 55-64
-
-
Mohn, F.1
Weber, M.2
Schubeler, D.3
Roloff, T.C.4
-
29
-
-
78651251739
-
Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias
-
Nair SS, Coolen MW, Stirzaker C et al. Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias. Epigenetics 6, 34-44 (2011).
-
(2011)
Epigenetics
, vol.6
, pp. 34-44
-
-
Nair, S.S.1
Coolen, M.W.2
Stirzaker, C.3
-
30
-
-
77957937011
-
Quantitative comparison of genome-wide DNA methylation mapping technologies
-
Bock C, Tomazou EM, Brinkman AB et al. Quantitative comparison of genome-wide DNA methylation mapping technologies. Nat. Biotechnol. 28, 1106-1114 (2010).
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 1106-1114
-
-
Bock, C.1
Tomazou, E.M.2
Brinkman, A.B.3
-
31
-
-
84864612696
-
Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal over-representation of ETS transcription factor binding sites
-
Hogart A, Lichtenberg J, Ajay SS, Anderson SM, Margulies EH, Bodine DM. Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal over-representation of ETS transcription factor binding sites. Genome Res. 22(8), 1407-1418 (2012).
-
(2012)
Genome Res.
, vol.22
, Issue.8
, pp. 1407-1418
-
-
Hogart, A.1
Lichtenberg, J.2
Ajay, S.S.3
Anderson, S.M.4
Margulies, E.H.5
Bodine, D.M.6
-
32
-
-
79960115813
-
High resolution detection and analysis of CpG dinucleotides methylation using MBD-Seq technology
-
Lan X, Adams C, Landers M et al. High resolution detection and analysis of CpG dinucleotides methylation using MBD-Seq technology. PLoS One 6, e22226 (2011).
-
(2011)
PLoS One
, vol.6
-
-
Lan, X.1
Adams, C.2
Landers, M.3
-
33
-
-
84866358306
-
Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared to bipolar disorder
-
Bergen SE, O'Dushlaine CT, Ripke S et al. Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared to bipolar disorder. Mol. Psychiatry 17(9), 880-886 (2012).
-
(2012)
Mol. Psychiatry
, vol.17
, Issue.9
, pp. 880-886
-
-
Bergen, S.E.1
O'Dushlaine, C.T.2
Ripke, S.3
-
34
-
-
80053384370
-
Genome-wide association study of schizophrenia identifies five novel loci
-
Schizophrenia Psychiatric Genome-Wide Association Study Consortium
-
Schizophrenia Psychiatric Genome-Wide Association Study Consortium. Genome-wide association study of schizophrenia identifies five novel loci. Nat. Genet. 43, 969-976 (2011).
-
(2011)
Nat. Genet.
, vol.43
, pp. 969-976
-
-
-
35
-
-
68449086236
-
Common polygenic variation contributes to risk of schizophrenia and bipolar disorder
-
International Schizophrenia Consortium.
-
International Schizophrenia Consortium. Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. Nature 460, 748-752 (2009).
-
(2009)
Nature
, vol.460
, pp. 748-752
-
-
-
36
-
-
69749090013
-
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
-
McKernan KJ, Peckham HE, Costa GL et al. Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding. Genome Res. 19(9), 1527-1541 (2009).
-
(2009)
Genome Res.
, vol.19
, Issue.9
, pp. 1527-1541
-
-
McKernan, K.J.1
Peckham, H.E.2
Costa, G.L.3
-
37
-
-
70449711243
-
Computation for ChIP-seq and RNA-seq studies
-
Pepke S, Wold B, Mortazavi A. Computation for ChIP-seq and RNA-seq studies. Nat. Methods. 6(11 Suppl.), S22-S32 (2009).
-
(2009)
Nat. Methods.
, vol.6
, Issue.11 SUPPL.
-
-
Pepke, S.1
Wold, B.2
Mortazavi, A.3
-
38
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang Y, Liu T, Meyer CA et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 9(9), R137 (2008).
-
(2008)
Genome Biol.
, vol.9
, Issue.9
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
-
39
-
-
46949098742
-
A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
-
DOI 10.1038/nbt1414, PII NBT1414
-
Down TA, Rakyan VK, Turner DJ et al. A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nat Biotechnol. 26(7), 779-785 (2008). (Pubitemid 351961453)
-
(2008)
Nature Biotechnology
, vol.26
, Issue.7
, pp. 779-785
-
-
Down, T.A.1
Rakyan, V.K.2
Turner, D.J.3
Flicek, P.4
Li, H.5
Kulesha, E.6
Graf, S.7
Johnson, N.8
Herrero, J.9
Tomazou, E.M.10
Thorne, N.P.11
Backdahl, L.12
Herberth, M.13
Howe, K.L.14
Jackson, D.K.15
Miretti, M.M.16
Marioni, J.C.17
Birney, E.18
Hubbard, T.J.P.19
Durbin, R.20
Tavare, S.21
Beck, S.22
more..
-
40
-
-
78649291183
-
Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage
-
Chavez L, Jozefczuk J, Grimm C et al. Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage. Genome Res. 20(10), 1441-1450 (2010).
-
(2010)
Genome Res.
, vol.20
, Issue.10
, pp. 1441-1450
-
-
Chavez, L.1
Jozefczuk, J.2
Grimm, C.3
-
41
-
-
83655163970
-
BM-Map: Bayesian mapping of multireads for next-generation sequencing data
-
Ji Y, Xu Y, Zhang Q et al. BM-Map: Bayesian mapping of multireads for next-generation sequencing data. Biometrics 67(4), 1215-1224 (2011).
-
(2011)
Biometrics
, vol.67
, Issue.4
, pp. 1215-1224
-
-
Ji, Y.1
Xu, Y.2
Zhang, Q.3
-
43
-
-
45549096818
-
Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping
-
Bock C, Walter J, Paulsen M, Lengauer T. Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping. Nucleic Acids Res. 36(10), e55 (2008).
-
(2008)
Nucleic Acids Res.
, vol.36
, Issue.10
-
-
Bock, C.1
Walter, J.2
Paulsen, M.3
Lengauer, T.4
-
44
-
-
34548292504
-
PLINK: A tool set for whole-genome association and population-based linkage analyses
-
DOI 10.1086/519795
-
Purcell S, Neale B, Todd-Brown K et al. PLINK: a tool set for whole-genome association and population-based linkage analyses. Am. J. Hum. Genet. 81(3), 559-575 (2007). (Pubitemid 47330214)
-
(2007)
American Journal of Human Genetics
, vol.81
, Issue.3
, pp. 559-575
-
-
Purcell, S.1
Neale, B.2
Todd-Brown, K.3
Thomas, L.4
Ferreira, M.A.R.5
Bender, D.6
Maller, J.7
Sklar, P.8
De Bakker, P.I.W.9
Daly, M.J.10
Sham, P.C.11
-
45
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
Alter O, Brown PO, Botstein D. Singular value decomposition for genome-wide expression data processing and modeling. Proc. Natl Acad. Sci. USA 97(18), 10101-10106 (2000).
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, Issue.18
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
46
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
DOI 10.1038/ng1847, PII NG1847
-
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet. 38(8), 904-909 (2006). (Pubitemid 44141658)
-
(2006)
Nature Genetics
, vol.38
, Issue.8
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Weinblatt, M.E.4
Shadick, N.A.5
Reich, D.6
-
47
-
-
0000071395
-
Some distance properties of latent root and vector methods used in multivariate analysis
-
Gower JC. Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika 53, 325-338 (1966).
-
(1966)
Biometrika
, vol.53
, pp. 325-338
-
-
Gower, J.C.1
-
48
-
-
53549104134
-
MEDME: An experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment
-
Pelizzola M, Koga Y, Urban AE et al. MEDME: an experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment. Genome Res. 18(10), 1652-1659 (2008).
-
(2008)
Genome Res.
, vol.18
, Issue.10
, pp. 1652-1659
-
-
Pelizzola, M.1
Koga, Y.2
Urban, A.E.3
-
50
-
-
74549167140
-
Methylation induced gene silencing of HtrA3 in smoking-related lung cancer
-
Beleford D, Liu Z, Rattan R et al. Methylation induced gene silencing of HtrA3 in smoking-related lung cancer. Clin. Cancer Res. 16(2), 398-409 (2010).
-
(2010)
Clin. Cancer Res.
, vol.16
, Issue.2
, pp. 398-409
-
-
Beleford, D.1
Liu, Z.2
Rattan, R.3
-
51
-
-
0026470248
-
Smoking and schizophrenia
-
Lohr JB, Flynn K. Smoking and schizophrenia. Schizophr Res. 8(2), 93-102 (1992).
-
(1992)
Schizophr Res.
, vol.8
, Issue.2
, pp. 93-102
-
-
Lohr, J.B.1
Flynn, K.2
-
52
-
-
84860814711
-
Genome-wide screen for metabolic syndrome susceptibility loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits
-
Kristiansson K, Perola M, Tikkanen E et al. Genome-wide screen for metabolic syndrome susceptibility loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits. Circ. Cardiovasc. Genet. 5(2), 242-249 (2012).
-
(2012)
Circ. Cardiovasc. Genet.
, vol.5
, Issue.2
, pp. 242-249
-
-
Kristiansson, K.1
Perola, M.2
Tikkanen, E.3
-
53
-
-
77955651636
-
Epigenetic alterations in aging
-
Gonzalo S. Epigenetic alterations in aging. J. Appl. Physiol. 109(2), 586-597 (2010).
-
(2010)
J. Appl. Physiol.
, vol.109
, Issue.2
, pp. 586-597
-
-
Gonzalo, S.1
-
54
-
-
80855144438
-
Epigenetic-aging-signature to determine age in different tissues
-
Koch CM, Wagner W. Epigenetic-aging-signature to determine age in different tissues. Aging (Albany NY). 3(10), 1018-1027 (2011).
-
(2011)
Aging (Albany NY).
, vol.3
, Issue.10
, pp. 1018-1027
-
-
Koch, C.M.1
Wagner, W.2
-
56
-
-
84860572791
-
Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population
-
Bell JT, Tsai PC, Yang TP et al. Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population. PLoS Genet. 8(4), e1002629 (2012).
-
(2012)
PLoS Genet.
, vol.8
, Issue.4
-
-
Bell, J.T.1
Tsai, P.C.2
Yang, T.P.3
-
57
-
-
84861483398
-
Methylation profile of DNA repetitive elements in human testicular germ cell tumor
-
Ushida H, Kawakami T, Minami K et al. Methylation profile of DNA repetitive elements in human testicular germ cell tumor. Mol Carcinog. 51(9), 711-722 (2011).
-
(2011)
Mol Carcinog.
, vol.51
, Issue.9
, pp. 711-722
-
-
Ushida, H.1
Kawakami, T.2
Minami, K.3
-
58
-
-
79960255428
-
DNA methylation in repetitive elements and Alzheimer disease
-
Bollati V, Galimberti D, Pergoli L et al. DNA methylation in repetitive elements and Alzheimer disease. Brain Behav Immun. 25(6), 1078-1083 (2011).
-
(2011)
Brain Behav Immun.
, vol.25
, Issue.6
, pp. 1078-1083
-
-
Bollati, V.1
Galimberti, D.2
Pergoli, L.3
-
59
-
-
69449085661
-
Differential repetitive DNA methylation in multiple myeloma molecular subgroups
-
Bollati V, Fabris S, Pegoraro V et al. Differential repetitive DNA methylation in multiple myeloma molecular subgroups. Carcinogenesis. 30(8), 1330-1335 (2009).
-
(2009)
Carcinogenesis.
, vol.30
, Issue.8
, pp. 1330-1335
-
-
Bollati, V.1
Fabris, S.2
Pegoraro, V.3
-
61
-
-
70149099610
-
Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context
-
Christensen BC, Houseman EA, Marsit CJ et al. Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context. PLoS Genet. 5(8), e1000602 (2009).
-
(2009)
PLoS Genet.
, vol.5
, Issue.8
-
-
Christensen, B.C.1
Houseman, E.A.2
Marsit, C.J.3
-
62
-
-
33751505540
-
DNA methylation profiling of human chromosomes 6, 20 and 22
-
DOI 10.1038/ng1909, PII NG1909
-
Eckhardt F, Lewin J, Cortese R et al. DNA methylation profiling of human chromosomes 6, 20 and 22. Nat Genet. 38(12), 1378-1385 (2006). (Pubitemid 44837559)
-
(2006)
Nature Genetics
, vol.38
, Issue.12
, pp. 1378-1385
-
-
Eckhardt, F.1
Lewin, J.2
Cortese, R.3
Rakyan, V.K.4
Attwood, J.5
Burger, M.6
Burton, J.7
Cox, T.V.8
Davies, R.9
Down, T.A.10
Haefliger, C.11
Horton, R.12
Howe, K.13
Jackson, D.K.14
Kunde, J.15
Koenig, C.16
Liddle, J.17
Niblett, D.18
Otto, T.19
Pettett, R.20
Seemann, S.21
Thompson, C.22
West, T.23
Rogers, J.24
Olek, A.25
Berlin, K.26
Beck, S.27
more..
-
63
-
-
0023119242
-
Temporal and regional changes in DNA methylation in the embryonic, extraembryonic and germ cell lineages during mouse embryo development
-
Monk M, Boubelik M, Lehnert S. Temporal and regional changes in DNA methylation in the embryonic, extraembryonic and germ cell lineages during mouse embryo development. Development 99(3), 371-382 (1987). (Pubitemid 17048855)
-
(1987)
Development
, vol.99
, Issue.3
, pp. 371-382
-
-
Monk, M.1
Boubelik, M.2
Lehnert, S.3
-
65
-
-
0027354081
-
Gene methylation patterns and expression
-
Yeivin A, Razin A. Gene methylation patterns and expression. EXS 64, 523-568 (1993).
-
(1993)
EXS
, vol.64
, pp. 523-568
-
-
Yeivin, A.1
Razin, A.2
-
66
-
-
0035874481
-
The marks, mechanisms and memory of epigenetic states in mammals
-
DOI 10.1042/0264-6021:3560001
-
Rakyan VK, Preis J, Morgan HD, Whitelaw E. The marks, mechanisms and memory of epigenetic states in mammals. Biochem J. 356(Pt 1), 1-10 (2001). (Pubitemid 34275701)
-
(2001)
Biochemical Journal
, vol.356
, Issue.1
, pp. 1-10
-
-
Rakyan, V.K.1
Preis, J.2
Morgan, H.D.3
Whitelaw, E.4
-
67
-
-
75849139815
-
Serum DNA can define tumor-specific genetic and epigenetic markers in gliomas of various grades
-
Lavon I, Refael M, Zelikovitch B, Shalom E, Siegal T. Serum DNA can define tumor-specific genetic and epigenetic markers in gliomas of various grades. Neuro Oncol. 12(2), 173-180 (2010).
-
(2010)
Neuro Oncol.
, vol.12
, Issue.2
, pp. 173-180
-
-
Lavon, I.1
Refael, M.2
Zelikovitch, B.3
Shalom, E.4
Siegal, T.5
-
68
-
-
53349103842
-
Diet and the epigenetic (re)programming of phenotypic differences in behavior
-
McGowan PO, Meaney MJ, Szyf M. Diet and the epigenetic (re)programming of phenotypic differences in behavior. Brain Res. 1237, 12-24 (2008).
-
(2008)
Brain Res.
, vol.1237
, pp. 12-24
-
-
McGowan, P.O.1
Meaney, M.J.2
Szyf, M.3
-
69
-
-
35148901501
-
Genomic methylation of peripheral blood leukocyte DNA: Influences of arsenic and folate in Bangladeshi adults
-
Pilsner JR, Liu X, Ahsan H et al. Genomic methylation of peripheral blood leukocyte DNA: influences of arsenic and folate in Bangladeshi adults. Am. J. Clin. Nutr. 86(4), 1179-1186 (2007). (Pubitemid 47538325)
-
(2007)
American Journal of Clinical Nutrition
, vol.86
, Issue.4
, pp. 1179-1186
-
-
Pilsner, J.R.1
Liu, X.2
Ahsan, H.3
Ilievski, V.4
Slavkovich, V.5
Levy, D.6
Factor-Litvak, P.7
Graziano, J.H.8
Gamble, M.V.9
-
71
-
-
46249117780
-
Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation
-
Kerkel K, Spadola A, Yuan E et al. Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation. Nat Genet. 40(7), 904-908 (2008).
-
(2008)
Nat Genet.
, vol.40
, Issue.7
, pp. 904-908
-
-
Kerkel, K.1
Spadola, A.2
Yuan, E.3
-
72
-
-
84859098571
-
The SVA package for removing batch effects and other unwanted variation in high-throughput experiments
-
Leek JT, Johnson WE, Parker HS, Jaffe AE, Storey JD. The SVA package for removing batch effects and other unwanted variation in high-throughput experiments. Bioinformatics 28(6), 882-883 (2012).
-
(2012)
Bioinformatics
, vol.28
, Issue.6
, pp. 882-883
-
-
Leek, J.T.1
Johnson, W.E.2
Parker, H.S.3
Jaffe, A.E.4
Storey, J.D.5
-
73
-
-
84871456341
-
-
Center for Biomarker Research and Personalized Medicine
-
Center for Biomarker Research and Personalized Medicine. www.biomarker.vcu.edu
-
-
-
-
74
-
-
84871402887
-
-
UCSC Genome Bioinformatics.
-
UCSC Genome Bioinformatics. http://genome.ucsc.edu
-
-
-
|