-
1
-
-
67249148158
-
Next-generation sequencing and metagenomic analysis: a universal diagnostic tool in plant virology
-
Adams IP, Glover RH, Monger WA, Mumford R, Jackeviciene E, Navalinskiene M, Samuitiene M, Boonham N (2009) Next-generation sequencing and metagenomic analysis: a universal diagnostic tool in plant virology. Mol Plant Pathol 10: 537-545.
-
(2009)
Mol Plant Pathol
, vol.10
, pp. 537-545
-
-
Adams, I.P.1
Glover, R.H.2
Monger, W.A.3
Mumford, R.4
Jackeviciene, E.5
Navalinskiene, M.6
Samuitiene, M.7
Boonham, N.8
-
2
-
-
67349209853
-
Next generation DNA sequencing techniques
-
Ansorge WJ (2009) Next generation DNA sequencing techniques. New Biotechnol 25: 195-203.
-
(2009)
New Biotechnol
, vol.25
, pp. 195-203
-
-
Ansorge, W.J.1
-
3
-
-
49449087467
-
Microbial contributions to climate change through carbon cycle feedbacks
-
Bardgett RD, Freeman C et al (2008) Microbial contributions to climate change through carbon cycle feedbacks. ISME J 2: 805-814.
-
(2008)
ISME J
, vol.2
, pp. 805-814
-
-
Bardgett, R.D.1
Freeman, C.2
-
4
-
-
34247580086
-
Routine fluorescence situ hybridization in soil
-
Bertaux J, Gloger U, Schmid M, Hartmann A, Scheu S (2007) Routine fluorescence situ hybridization in soil. J Microbiol Methods 69: 451-460.
-
(2007)
J Microbiol Methods
, vol.69
, pp. 451-460
-
-
Bertaux, J.1
Gloger, U.2
Schmid, M.3
Hartmann, A.4
Scheu, S.5
-
5
-
-
26944438656
-
Analysis of the potential functional diversity of the bacterial community in soil: a reproducible procedure using sole-carbon-source utilization profiles
-
Calbrix R, Laval K, Barray S (2005) Analysis of the potential functional diversity of the bacterial community in soil: a reproducible procedure using sole-carbon-source utilization profiles. Eur J Soil Biol 41: 11-20.
-
(2005)
Eur J Soil Biol
, vol.41
, pp. 11-20
-
-
Calbrix, R.1
Laval, K.2
Barray, S.3
-
6
-
-
0035433897
-
Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA micro arrays
-
Cho J-C, Tiedje TM (2001) Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA micro arrays. Appl Environ Microbiol 67: 3677-3682.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 3677-3682
-
-
Cho, J.-C.1
Tiedje, T.M.2
-
7
-
-
19444385451
-
Metagenomic gene discovery: past, present and future
-
Cowan D, Meyer Q, Stafford W, Muyanga S, Cameron R, Wittwer P (2005) Metagenomic gene discovery: past, present and future. Trends Biotechnol 23(6): 321-329.
-
(2005)
Trends Biotechnol
, vol.23
, Issue.6
, pp. 321-329
-
-
Cowan, D.1
Meyer, Q.2
Stafford, W.3
Muyanga, S.4
Cameron, R.5
Wittwer, P.6
-
8
-
-
0036624813
-
Molecular community analysis of microbial diversity
-
Dahllof I (2002) Molecular community analysis of microbial diversity. Curr Opin Biotechnol 13: 213-217.
-
(2002)
Curr Opin Biotechnol
, vol.13
, pp. 213-217
-
-
Dahllof, I.1
-
9
-
-
13544277388
-
Effects of growth medium, inoculum size and incubation on culturability and isolation of soil bacteria
-
Davis KER, Joseph SJ, Jansen PH (2005) Effects of growth medium, inoculum size and incubation on culturability and isolation of soil bacteria. Appl Environ Microbiol 71: 826-834.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 826-834
-
-
Davis, K.E.R.1
Joseph, S.J.2
Jansen, P.H.3
-
10
-
-
0034554845
-
Monitoring of activity dynamics of an anaerobic digester bacteria using 16 S rRNA polymerase chain reaction single strand conformation polymorphism analysis
-
Deldes C, Moletta R, Godon JJ (2000) Monitoring of activity dynamics of an anaerobic digester bacteria using 16 S rRNA polymerase chain reaction single strand conformation polymorphism analysis. Environ Microbiol 2: 506-515.
-
(2000)
Environ Microbiol
, vol.2
, pp. 506-515
-
-
Deldes, C.1
Moletta, R.2
Godon, J.J.3
-
11
-
-
66049089612
-
On the origin of prokaryotic species
-
Doolittle WF, Zhaxybayeva O (2009) On the origin of prokaryotic species. Genome Res 19: 744-756.
-
(2009)
Genome Res
, vol.19
, pp. 744-756
-
-
Doolittle, W.F.1
Zhaxybayeva, O.2
-
12
-
-
3242685365
-
A DNA micro array-based array for the characterization of commercially formulated products
-
Dubois GW, Hill S, England LS, Edge T, Masson L, Trevors JT, Brousseau E (2004) A DNA micro array-based array for the characterization of commercially formulated products. J Microbiol Methods 58: 251-262.
-
(2004)
J Microbiol Methods
, vol.58
, pp. 251-262
-
-
Dubois, G.W.1
Hill, S.2
England, L.S.3
Edge, T.4
Masson, L.5
Trevors, J.T.6
Brousseau, E.7
-
13
-
-
34547781320
-
DNA microarray technology for the microbiologist: an overview
-
Ehrenreich A (2006) DNA microarray technology for the microbiologist: an overview. Appl Microbiol Biotechnol 73: 255-273.
-
(2006)
Appl Microbiol Biotechnol
, vol.73
, pp. 255-273
-
-
Ehrenreich, A.1
-
15
-
-
0346306031
-
Assessing shifts in microbial community structure across a range of grasslands of differing management intensity using CLPP, PLFA community DNA techniques
-
Grayston SJ, Campbell CD, Bardgett RD, Mawdsley JL, Clegg CD, Ritz K, Griffiths BC, Rodwell JS, Edwards SJ, Davies WJ, Elston DJ, Millard P (2004) Assessing shifts in microbial community structure across a range of grasslands of differing management intensity using CLPP, PLFA community DNA techniques. App Soil Ecol 25: 63-84.
-
(2004)
App Soil Ecol
, vol.25
, pp. 63-84
-
-
Grayston, S.J.1
Campbell, C.D.2
Bardgett, R.D.3
Mawdsley, J.L.4
Clegg, C.D.5
Ritz, K.6
Griffiths, B.C.7
Rodwell, J.S.8
Edwards, S.J.9
Davies, W.J.10
Elston, D.J.11
Millard, P.12
-
16
-
-
10344227692
-
Metagenomics: application of genomics to uncultured microorganisms
-
Handelsman J (2004) Metagenomics: application of genomics to uncultured microorganisms. Microbiol BioI Rev 68: 669-685.
-
(2004)
Microbiol BioI Rev
, vol.68
, pp. 669-685
-
-
Handelsman, J.1
-
17
-
-
77950595690
-
Culture-independent molecular techniques for soil microbial ecology
-
Hirsch PR, Mauchline TH, Clark IM (2010) Culture-independent molecular techniques for soil microbial ecology. Soil Biol Biochem 42: 878-887.
-
(2010)
Soil Biol Biochem
, vol.42
, pp. 878-887
-
-
Hirsch, P.R.1
Mauchline, T.H.2
Clark, I.M.3
-
18
-
-
84858151953
-
Measuring the effects of pesticides on bacterial communities in soil: a critical review
-
Imfeld G, Vuilleumier S (2012) Measuring the effects of pesticides on bacterial communities in soil: a critical review. Eur J Soil Biol 49: 22-30.
-
(2012)
Eur J Soil Biol
, vol.49
, pp. 22-30
-
-
Imfeld, G.1
Vuilleumier, S.2
-
19
-
-
46949095048
-
Recent advances in molecular techniques to study microbial in food-associated matrices and processes
-
Juste A, Thomma BPHJ, Lievens B (2008) Recent advances in molecular techniques to study microbial in food-associated matrices and processes. Food Microbiol 25: 745-76.
-
(2008)
Food Microbiol
, vol.25
, pp. 745-776
-
-
Juste, A.1
Thomma, B.P.H.J.2
Lievens, B.3
-
20
-
-
77956714977
-
Size does matter: application-driven approaches for soil metagenomics
-
Kakirde KS, Parsley LC, Liles MR (2010) Size does matter: application-driven approaches for soil metagenomics. Soil Biol Biochem 42: 1911-1923.
-
(2010)
Soil Biol Biochem
, vol.42
, pp. 1911-1923
-
-
Kakirde, K.S.1
Parsley, L.C.2
Liles, M.R.3
-
21
-
-
3242731518
-
Methods of studying soil microbial diversity
-
Kirk JL, Beaudette LA, Hart M, Moutoglis P, Klironomos JM, Lee H, Trevor JT (2004) Methods of studying soil microbial diversity. J Microbiol Methods 58: 169-188.
-
(2004)
J Microbiol Methods
, vol.58
, pp. 169-188
-
-
Kirk, J.L.1
Beaudette, L.A.2
Hart, M.3
Moutoglis, P.4
Klironomos, J.M.5
Lee, H.6
Trevor, J.T.7
-
22
-
-
77952664290
-
Selected fluorescent techniques for identification of the physiological state of individual water and soil bacterial cells-review
-
Lew S, Lew M, Mieszczynski T, Szarek J (2010) Selected fluorescent techniques for identification of the physiological state of individual water and soil bacterial cells-review. Folia Microbiol 55(2): 107-118.
-
(2010)
Folia Microbiol
, vol.55
, Issue.2
, pp. 107-118
-
-
Lew, S.1
Lew, M.2
Mieszczynski, T.3
Szarek, J.4
-
24
-
-
44849128805
-
Species divergence and the measurement of microbial diversity
-
Lozupone CA, Knight R (2008) Species divergence and the measurement of microbial diversity. FEMS Microbiol 32: 557-578.
-
(2008)
FEMS Microbiol
, vol.32
, pp. 557-578
-
-
Lozupone, C.A.1
Knight, R.2
-
25
-
-
33750742000
-
Single-stranded conformational polymorphism for separation of mixed rRNAS (rRNA-SSCP), a new method for profiling microbial communities
-
MacGregor BJ, Amann R (2006) Single-stranded conformational polymorphism for separation of mixed rRNAS (rRNA-SSCP), a new method for profiling microbial communities. Syst Appl Microbiol 29: 661-670.
-
(2006)
Syst Appl Microbiol
, vol.29
, pp. 661-670
-
-
MacGregor, B.J.1
Amann, R.2
-
26
-
-
39149088927
-
The use of molecular techniques to characterize the microbial communities in contaminated soil and water
-
Malik S, Beer M, Megharaj M, Naidu R (2008) The use of molecular techniques to characterize the microbial communities in contaminated soil and water. Environ Int 34: 265-276.
-
(2008)
Environ Int
, vol.34
, pp. 265-276
-
-
Malik, S.1
Beer, M.2
Megharaj, M.3
Naidu, R.4
-
27
-
-
39649117755
-
The impact of next-generation sequencing technology on genetics
-
Mardis ER (2008) The impact of next-generation sequencing technology on genetics. Trends Genet 24: 133-141.
-
(2008)
Trends Genet
, vol.24
, pp. 133-141
-
-
Mardis, E.R.1
-
28
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Irzyk GP, Jando SC, Alenquer ML, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, Lohman KL, Lu H, Makhijani VB, Mc-Dade KE, McKenna MP, Myers EW, Nickerson E, Nobile JR, Plant R, Puc BP, Ronan MT, Roth GT, Sarkis GJ, Simons JF, Simpson JW, Srinivasan M, Tartaro KR, Tomasz A, Vogt KA, Volkmer GA, Wang SH, Wang Y, Weiner MP, Yu P, Begley RF, Rothberg JM (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
Lohman, K.L.31
Lu, H.32
Makhijani, V.B.33
Mc-Dade, K.E.34
McKenna, M.P.35
Myers, E.W.36
Nickerson, E.37
Nobile, J.R.38
Plant, R.39
Puc, B.P.40
Ronan, M.T.41
Roth, G.T.42
Sarkis, G.J.43
Simons, J.F.44
Simpson, J.W.45
Srinivasan, M.46
Tartaro, K.R.47
Tomasz, A.48
Vogt, K.A.49
Volkmer, G.A.50
Wang, S.H.51
Wang, Y.52
Weiner, M.P.53
Yu, P.54
Begley, R.F.55
Rothberg, J.M.56
more..
-
29
-
-
50549085547
-
Isolation and analysis of mRNA from environmental microbial communities
-
McGrath KC, Thomas-Hall SR, Cheng CT, Leo L, Alexa A, Schmidt S, Schenk PM (2008) Isolation and analysis of mRNA from environmental microbial communities. J Microbiol Methods 75: 172-176.
-
(2008)
J Microbiol Methods
, vol.75
, pp. 172-176
-
-
McGrath, K.C.1
Thomas-Hall, S.R.2
Cheng, C.T.3
Leo, L.4
Alexa, A.5
Schmidt, S.6
Schenk, P.M.7
-
30
-
-
78650008729
-
Linking bacterial identities and ecosystem processes: can "omic" be more than the sum of their parts?
-
Morales SE, Holben WE (2011) Linking bacterial identities and ecosystem processes: can "omic" be more than the sum of their parts? FEMS Microbiol Ecol 75: 2-16.
-
(2011)
FEMS Microbiol Ecol
, vol.75
, pp. 2-16
-
-
Morales, S.E.1
Holben, W.E.2
-
31
-
-
34547579868
-
Genotypic microbial community profiling: a critical technical review
-
Nocker A, Burr M, Camper AK (2007) Genotypic microbial community profiling: a critical technical review. Microbial Ecol 54: 276-289.
-
(2007)
Microbial Ecol
, vol.54
, pp. 276-289
-
-
Nocker, A.1
Burr, M.2
Camper, A.K.3
-
32
-
-
79956280446
-
The evolution of pyrosequencing for microbiology: from genes to genomes
-
Novais RC, Thorstenson YR (2011) The evolution of pyrosequencing for microbiology: from genes to genomes. J Microbiol Methods 86(1): 1-7.
-
(2011)
J Microbiol Methods
, vol.86
, Issue.1
, pp. 1-7
-
-
Novais, R.C.1
Thorstenson, Y.R.2
-
33
-
-
0037447853
-
Spatial distribution of bacterial communities and their relationships with the microarchitecture soil
-
Nunan N, Wu KJ, Young IM, Crawford JW, Ritz K (2003) Spatial distribution of bacterial communities and their relationships with the microarchitecture soil. FEMS Microbiol Ecol 44: 203-215.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 203-215
-
-
Nunan, N.1
Wu, K.J.2
Young, I.M.3
Crawford, J.W.4
Ritz, K.5
-
34
-
-
0034547801
-
An evaluation of terminal restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics
-
Obsorn AM, Moore ERB, Timmis KN (2000) An evaluation of terminal restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environ Microbiol 2: 39-50.
-
(2000)
Environ Microbiol
, vol.2
, pp. 39-50
-
-
Obsorn, A.M.1
Moore, E.R.B.2
Timmis, K.N.3
-
36
-
-
53149111487
-
Strategies for accessing soil metagenome for desired applications
-
Rajendhran J, Gunasekaran P (2008) Strategies for accessing soil metagenome for desired applications. Biotechnol Adv 26: 576-590.
-
(2008)
Biotechnol Adv
, vol.26
, pp. 576-590
-
-
Rajendhran, J.1
Gunasekaran, P.2
-
37
-
-
0034803155
-
Quantitative and qualitative methods microscale distribution of bacteria in soil
-
Ranjard L, Richaume A (2001) Quantitative and qualitative methods microscale distribution of bacteria in soil. Res Microbiol 152: 707-716.
-
(2001)
Res Microbiol
, vol.152
, pp. 707-716
-
-
Ranjard, L.1
Richaume, A.2
-
38
-
-
0034123066
-
Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment
-
Ranjard L, Poly F, Nazaret F (2000) Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment. Res Microbiol 151: 167-177.
-
(2000)
Res Microbiol
, vol.151
, pp. 167-177
-
-
Ranjard, L.1
Poly, F.2
Nazaret, F.3
-
39
-
-
0035489392
-
Characterization of bacterial and fungal soil communities by automated ribosomal intergenic spacer analysis fingerprints: biological and methodological variability
-
Ranjard L, Poly F, Lata JC, Mougel C, Thioulouse J, Nazaret S (2001) Characterization of bacterial and fungal soil communities by automated ribosomal intergenic spacer analysis fingerprints: biological and methodological variability. Appl Environ Microbiol 67: 4479-4487.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4479-4487
-
-
Ranjard, L.1
Poly, F.2
Lata, J.C.3
Mougel, C.4
Thioulouse, J.5
Nazaret, S.6
-
41
-
-
0035153070
-
Pyrosequencing sheds light on DNA sequencing
-
Ronaghi M (2001) Pyrosequencing sheds light on DNA sequencing. Genome Res 11: 3-11.
-
(2001)
Genome Res
, vol.11
, pp. 3-11
-
-
Ronaghi, M.1
-
42
-
-
72949101271
-
Functional viral metagenomics and the next generation of molecular tools
-
Schoenfeld T, Liles M, Wommack EK, Polson SW, Godiska R, Mead D (2009) Functional viral metagenomics and the next generation of molecular tools. Trends Microbiol 18: 20-29.
-
(2009)
Trends Microbiol
, vol.18
, pp. 20-29
-
-
Schoenfeld, T.1
Liles, M.2
Wommack, E.K.3
Polson, S.W.4
Godiska, R.5
Mead, D.6
-
43
-
-
84856496549
-
Generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
-
Scholz MB, Lo CC, Chain PSG (2011) Generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis. Curr Opin Biotechnol 23: 1-7.
-
(2011)
Curr Opin Biotechnol
, vol.23
, pp. 1-7
-
-
Scholz, M.B.1
Lo, C.C.2
Chain, P.S.G.3
-
44
-
-
33646382572
-
GIS, geostatistics, metadata banking, and tree-based models for data analysis and mapping in environmental modelling and epidemiology
-
Schroder W (2006) GIS, geostatistics, metadata banking, and tree-based models for data analysis and mapping in environmental modelling and epidemiology. Int J Med Microbiol 296: 23-36.
-
(2006)
Int J Med Microbiol
, vol.296
, pp. 23-36
-
-
Schroder, W.1
-
45
-
-
20444492638
-
-
San Diego: Academic
-
Scowa KM, Schwartza E, Johnsona MJ, Macaladya JL (2001) Microbial biodiversity, measurement of, In: Encyclopedia of Biodiversity, vol 4. Academic, San Diego, pp 177-190.
-
(2001)
Microbial Biodiversity, Measurement of, In: Encyclopedia of Biodiversity
, vol.4
, pp. 177-190
-
-
Scowa, K.M.1
Schwartza, E.2
Johnsona, M.J.3
Macaladya, J.L.4
-
46
-
-
0035462376
-
Microbial population structure in soil particle size fractions of a long term fertilizer field experiment
-
Sessitsch A, Weilharter A, Gerzabek MH, Kirchman H, Kandeler E (2001) Microbial population structure in soil particle size fractions of a long term fertilizer field experiment. Appl Environ Microbiol 67: 4215-4224.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4215-4224
-
-
Sessitsch, A.1
Weilharter, A.2
Gerzabek, M.H.3
Kirchman, H.4
Kandeler, E.5
-
47
-
-
33645054591
-
Investigating microbial community structure in soils by physiological, biochemical molecular methods
-
Singh BK, Munro S, Reid E, Ord B, Potts JM, Paterson E, Millard P (2006) Investigating microbial community structure in soils by physiological, biochemical molecular methods. Eur J Soil Sci 57: 72-82.
-
(2006)
Eur J Soil Sci
, vol.57
, pp. 72-82
-
-
Singh, B.K.1
Munro, S.2
Reid, E.3
Ord, B.4
Potts, J.M.5
Paterson, E.6
Millard, P.7
-
48
-
-
0035344248
-
Diversity and of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods
-
Smit E, Leeflang P, Gommans S, van de Broek J, van MS, Wernars K (2001) Diversity and of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl Environ Microbiol 67: 2284-2291.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2284-2291
-
-
Smit, E.1
Leeflang, P.2
Gommans, S.3
van de Broek, J.4
van, M.S.5
Wernars, K.6
-
49
-
-
1642564156
-
The microbial community in the rhizosphere determined by community-level physiological profiles (CLPP) and direct soil- and CFU-PLFA techniques
-
Söderberg KH, Probanza A, Jumpponenc BE (2004) The microbial community in the rhizosphere determined by community-level physiological profiles (CLPP) and direct soil- and CFU-PLFA techniques. Appl Soil Ecol 25: 135-145.
-
(2004)
Appl Soil Ecol
, vol.25
, pp. 135-145
-
-
Söderberg, K.H.1
Probanza, A.2
Jumpponenc, B.E.3
-
50
-
-
0035163597
-
Microvariation artifacts introduced by PCR and cloning of closely related 16 S rRNA gene sequences
-
Speksnijder AGCL, Kowalchuck GA, De Jong S, Kline E, Stephen JR, Laanbroek HJ (2001) Microvariation artifacts introduced by PCR and cloning of closely related 16 S rRNA gene sequences. Appl Environ Microbiol 67: 469-472.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 469-472
-
-
Speksnijder, A.G.C.L.1
Kowalchuck, G.A.2
De Jong, S.3
Kline, E.4
Stephen, J.R.5
Laanbroek, H.J.6
-
51
-
-
45849130924
-
Emerging DNA sequencing technologies for human genomic medicine
-
Strausberg RL, Levy S, Rogers YS (2008) Emerging DNA sequencing technologies for human genomic medicine. Drug Discov Today 13(13-14): 569-77.
-
(2008)
Drug Discov Today
, vol.13
, Issue.13-14
, pp. 569-577
-
-
Strausberg, R.L.1
Levy, S.2
Rogers, Y.S.3
-
52
-
-
0033652044
-
Bias caused by using different isolation media for assessing the genetic diversity of a natural microbial population
-
Tabacchioni S, Chiainni L, Bevivino A, Cantale C, Dalmastri C (2000) Bias caused by using different isolation media for assessing the genetic diversity of a natural microbial population. Microbial Ecol 40: 169-176.
-
(2000)
Microbial Ecol
, vol.40
, pp. 169-176
-
-
Tabacchioni, S.1
Chiainni, L.2
Bevivino, A.3
Cantale, C.4
Dalmastri, C.5
-
53
-
-
83655181356
-
Biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil extraction procedure
-
Terrat S, Christen R, Dequiedt S, Lelievre M, Nowak V, Regnier T, Cachar D, Plassart P, Winker P, Jolivet C, Bispo A, Lemanceau P, Maron PA, Mougel C, Ranjard L (2012) Biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil extraction procedure. Microbial Biotechnol 5(1): 135-141.
-
(2012)
Microbial Biotechnol
, vol.5
, Issue.1
, pp. 135-141
-
-
Terrat, S.1
Christen, R.2
Dequiedt, S.3
Lelievre, M.4
Nowak, V.5
Regnier, T.6
Cachar, D.7
Plassart, P.8
Winker, P.9
Jolivet, C.10
Bispo, A.11
Lemanceau, P.12
Maron, P.A.13
Mougel, C.14
Ranjard, L.15
-
54
-
-
20244376755
-
Comparative metagenomics of microbial communities
-
Tringe SG, Von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM (2005) Comparative metagenomics of microbial communities. Sci 308: 554-557.
-
(2005)
Sci
, vol.308
, pp. 554-557
-
-
Tringe, S.G.1
Von Mering, C.2
Kobayashi, A.3
Salamov, A.A.4
Chen, K.5
Chang, H.W.6
Podar, M.7
Short, J.M.8
Mathur, E.J.9
Detter, J.C.10
Bork, P.11
Hugenholtz, P.12
Rubin, E.M.13
-
55
-
-
0036848573
-
The ecology of transfer of mobile genetic elements
-
van Elsas JD, Balley MJ (2002) The ecology of transfer of mobile genetic elements. FEMS Microbiol Ecol 42: 187-197.
-
(2002)
FEMS Microbiol Ecol
, vol.42
, pp. 187-197
-
-
van Elsas, J.D.1
Balley, M.J.2
-
56
-
-
79952100105
-
A review of molecular methods to study the microbiota of soil and the mycosphere
-
van Elsas JD, Boersma FGH (2011) A review of molecular methods to study the microbiota of soil and the mycosphere. Eur J Soil Biol 47: 77-87.
-
(2011)
Eur J Soil Biol
, vol.47
, pp. 77-87
-
-
van Elsas, J.D.1
Boersma, F.G.H.2
-
57
-
-
33746496746
-
Estimating soil microbial diversity and community composition
-
J. Bloem, D. W. Hopkins, and A. Benedetti (Eds.), Cambridge: CABI
-
van Elsas JD, Rutgers M (2005) Estimating soil microbial diversity and community composition. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for assessing soil quality. CABI, Cambridge.
-
(2005)
Microbiological Methods for Assessing Soil Quality
-
-
van Elsas, J.D.1
Rutgers, M.2
-
58
-
-
64149123778
-
Next-generation sequencing: from basic research to diagnostics
-
Voelkerding KV, Dames SA, Durtschi JD (2009) Next-generation sequencing: from basic research to diagnostics. Clin Chem 55(4): 641-658.
-
(2009)
Clin Chem
, vol.55
, Issue.4
, pp. 641-658
-
-
Voelkerding, K.V.1
Dames, S.A.2
Durtschi, J.D.3
-
59
-
-
37449024168
-
Impacts of methamidophos on the biochemical, catabolic, and genetic characteristics of soil microbial communities
-
Wang MC, Liu YH, Wang O, Gong M, Hua XM, Pang YJ, Hu S, Yang YH (2008) Impacts of methamidophos on the biochemical, catabolic, and genetic characteristics of soil microbial communities. Soil Biol Biochem 40: 778-788.
-
(2008)
Soil Biol Biochem
, vol.40
, pp. 778-788
-
-
Wang, M.C.1
Liu, Y.H.2
Wang, O.3
Gong, M.4
Hua, X.M.5
Pang, Y.J.6
Hu, S.7
Yang, Y.H.8
-
61
-
-
33646547584
-
Microbial ecology in the age of genomics and metagenomics: concepts, tools, and recent advances
-
Xu J (2006) Microbial ecology in the age of genomics and metagenomics: concepts, tools, and recent advances. Mol Ecol 15: 1713-1731.
-
(2006)
Mol Ecol
, vol.15
, pp. 1713-1731
-
-
Xu, J.1
-
63
-
-
80053236464
-
Responses of Scirpus triqueter, soil enzymes and microbial community during of pyrene contaminated soil in simulated wetland
-
Zhang X, Liu X, Liu S, Liu F, Chen L, Xu G, Zhong C, Su P, Cao Z (2011) Responses of Scirpus triqueter, soil enzymes and microbial community during of pyrene contaminated soil in simulated wetland. J Hazardous Materials 193: 45-51.
-
(2011)
J Hazardous Materials
, vol.193
, pp. 45-51
-
-
Zhang, X.1
Liu, X.2
Liu, S.3
Liu, F.4
Chen, L.5
Xu, G.6
Zhong, C.7
Su, P.8
Cao, Z.9
-
64
-
-
0036136025
-
Spatial and resource factors influencing high microbial diversity in soil
-
Zhou J, Xia B, Treves DS, Wu L-Y, Marsh TL, O' Neill RV, Palumbo AV, Tiedje JM (2002) Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microbiol 68: 326-334.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 326-334
-
-
Zhou, J.1
Xia, B.2
Treves, D.S.3
Wu, L.-Y.4
Marsh, T.L.5
O' Neill, R.V.6
Palumbo, A.V.7
Tiedje, J.M.8
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