-
4
-
-
68649123756
-
The GroEL/GroES cis cavity as a passive anti-aggregation device
-
A.L. Horwich, A.C. Apetri, and W.A. Fenton The GroEL/GroES cis cavity as a passive anti-aggregation device FEBS Lett. 583 2009 2654 2662
-
(2009)
FEBS Lett.
, vol.583
, pp. 2654-2662
-
-
Horwich, A.L.1
Apetri, A.C.2
Fenton, W.A.3
-
5
-
-
0033617534
-
Chaperonin function: Folding by forced unfolding
-
DOI 10.1126/science.284.5415.822
-
M. Shtilerman, G.H. Lorimer, and S.W. Englander Chaperonin function: folding by forced unfolding Science 284 1999 822 825 (Pubitemid 29291351)
-
(1999)
Science
, vol.284
, Issue.5415
, pp. 822-825
-
-
Shtilerman, M.1
Lorimer, G.H.2
Englander, S.W.3
-
6
-
-
77955360949
-
Single-molecule spectroscopy of protein folding in a chaperonin cage
-
H. Hofmann, and F. Hillger B. Schuler Single-molecule spectroscopy of protein folding in a chaperonin cage Proc. Natl. Acad. Sci. USA 107 2010 11793 11798
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 11793-11798
-
-
Hofmann, H.1
Hillger, F.2
Schuler, B.3
-
8
-
-
84868121425
-
Decoding nonspecific interactions from nature
-
A.D. White, and A.K. Nowinski S. Jiang Decoding nonspecific interactions from nature Chem. Sci. 3 2012 3488 3494
-
(2012)
Chem. Sci.
, vol.3
, pp. 3488-3494
-
-
White, A.D.1
Nowinski, A.K.2
Jiang, S.3
-
9
-
-
77649210916
-
Ultralow-fouling, functionalizable, and hydrolyzable zwitterionic materials and their derivatives for biological applications
-
S. Jiang, and Z. Cao Ultralow-fouling, functionalizable, and hydrolyzable zwitterionic materials and their derivatives for biological applications Adv. Mater. (Deerfield Beach, Fla.) 22 2010 920 932
-
(2010)
Adv. Mater. (Deerfield Beach, Fla.)
, vol.22
, pp. 920-932
-
-
Jiang, S.1
Cao, Z.2
-
10
-
-
33644515328
-
Mimicking the action of GroEL in molecular dynamics simulations: Application to the refinement of protein structures
-
H. Fan, and A.E. Mark Mimicking the action of GroEL in molecular dynamics simulations: application to the refinement of protein structures Protein Sci. 15 2006 441 448
-
(2006)
Protein Sci.
, vol.15
, pp. 441-448
-
-
Fan, H.1
Mark, A.E.2
-
11
-
-
80053060122
-
Simulation studies of protein folding/unfolding equilibrium under polar and nonpolar confinement
-
J. Tian, and A.E. Garcia Simulation studies of protein folding/unfolding equilibrium under polar and nonpolar confinement J. Am. Chem. Soc. 133 2011 15157 15164
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 15157-15164
-
-
Tian, J.1
Garcia, A.E.2
-
12
-
-
0002617993
-
A simple model of chaperonin-mediated protein folding
-
DOI 10.1002/(SICI)1097-0134 (199603)24:3<345:: AID-PROT7>3.0.CO;2-F
-
H.S. Chan, and K.A. Dill A simple model of chaperonin-mediated protein folding Proteins 24 1996 345 351 (Pubitemid 26095966)
-
(1996)
Proteins: Structure, Function and Genetics
, vol.24
, Issue.3
, pp. 345-351
-
-
Chan, H.S.1
Dill, K.A.2
-
13
-
-
79961175624
-
-
Springer-Verlag, New York Database-as-a-Service for Long Tail Science
-
Howe, B., G. Cole,..., L. Battle. 2011. Database-as-a-Service for Long Tail Science. In Proceedings of the 23rd International Conference on Scientific and Statistical Database Management (SSDBM 11). 480-489. Springer-Verlag, New York.
-
(2011)
Proceedings of the 23rd International Conference on Scientific and Statistical Database Management (SSDBM 11)
, pp. 480-489
-
-
Howe, B.1
Cole, G.2
Battle, L.3
-
15
-
-
0032548904
-
Adaptation of protein surfaces to subcellular location
-
DOI 10.1006/jmbi.1997.1498
-
M.A. Andrade, S.I. O'Donoghue, and B. Rost Adaptation of protein surfaces to subcellular location J. Mol. Biol. 276 1998 517 525 (Pubitemid 28085337)
-
(1998)
Journal of Molecular Biology
, vol.276
, Issue.2
, pp. 517-525
-
-
Andrade, M.A.1
O'Donoghue, S.I.2
Rost, B.3
-
16
-
-
12544256134
-
Calculation of standard atomic volumes for RNA and comparison with proteins: RNA is packed more tightly
-
N.R. Voss, and M. Gerstein Calculation of standard atomic volumes for RNA and comparison with proteins: RNA is packed more tightly J. Mol. Biol. 346 2005 477 492
-
(2005)
J. Mol. Biol.
, vol.346
, pp. 477-492
-
-
Voss, N.R.1
Gerstein, M.2
-
17
-
-
1842326139
-
Bayesian statistical analysis of protein side-chain rotamer preferences
-
R.L. Dunbrack Jr., and F.E. Cohen Bayesian statistical analysis of protein side-chain rotamer preferences Protein Sci. 6 1997 1661 1681 (Pubitemid 27333069)
-
(1997)
Protein Science
, vol.6
, Issue.8
, pp. 1661-1681
-
-
Dunbrack Jr., R.L.1
Cohen, F.E.2
-
19
-
-
58149498257
-
Thermodynamics and kinetics of protein folding under confinement
-
J. Mittal, and R.B. Best Thermodynamics and kinetics of protein folding under confinement Proc. Natl. Acad. Sci. USA 105 2008 20233 20238
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 20233-20238
-
-
Mittal, J.1
Best, R.B.2
-
21
-
-
4344716256
-
Random-coil behavior and the dimensions of chemically unfolded proteins
-
DOI 10.1073/pnas.0403643101
-
J.E. Kohn, and I.S. Millett K.W. Plaxco Random-coil behavior and the dimensions of chemically unfolded proteins Proc. Natl. Acad. Sci. USA 101 2004 12491 12496 (Pubitemid 39122051)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.34
, pp. 12491-12496
-
-
Kohn, J.E.1
Millett, I.S.2
Jacob, J.3
Zagrovic, B.4
Dillon, T.M.5
Cingel, N.6
Dothager, R.S.7
Seifert, S.8
Thiyagarajan, P.9
Sosnick, T.R.10
Hasan, M.Z.11
Pande, V.S.12
Ruczinski, I.13
Doniach, S.14
Plaxco, K.W.15
-
22
-
-
33845377127
-
Estimation of effective interresidue contact energies from protein crystal structures: Quasi-chemical approximation
-
S. Miyazawa, and R.L. Jernigan Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation Macromolecules 18 1985 534 552
-
(1985)
Macromolecules
, vol.18
, pp. 534-552
-
-
Miyazawa, S.1
Jernigan, R.L.2
-
23
-
-
0034924812
-
Folding of newly translated proteins in vivo: The role of molecular chaperones
-
J. Frydman Folding of newly translated proteins in vivo: the role of molecular chaperones Annu. Rev. Biochem. 70 2001 603 647
-
(2001)
Annu. Rev. Biochem.
, vol.70
, pp. 603-647
-
-
Frydman, J.1
-
24
-
-
4944221602
-
Expansion and compression of a protein folding intermediate by GroEL
-
DOI 10.1016/j.molcel.2004.09.003, PII S1097276504005210
-
Z. Lin, and H.S. Rye Expansion and compression of a protein folding intermediate by GroEL Mol. Cell 16 2004 23 34 (Pubitemid 39330149)
-
(2004)
Molecular Cell
, vol.16
, Issue.1
, pp. 23-34
-
-
Lin, Z.1
Rye, H.S.2
-
25
-
-
0028025404
-
Thermodynamic partitioning model for hydrophobic binding of polypeptides by GroEL. II. GroEL recognizes thermally unfolded mature β-lactamase
-
R. Zahn, and A. Plückthun Thermodynamic partitioning model for hydrophobic binding of polypeptides by GroEL. II. GroEL recognizes thermally unfolded mature β-lactamase J. Mol. Biol. 242 1994 165 174
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 165-174
-
-
Zahn, R.1
Plückthun, A.2
-
27
-
-
78651447522
-
Calculation of local water densities in biological systems: A comparison of molecular dynamics simulations and the 3D-RISM-KH molecular theory of solvation
-
M.C. Stumpe, and N. Blinov V.S. Pande Calculation of local water densities in biological systems: a comparison of molecular dynamics simulations and the 3D-RISM-KH molecular theory of solvation J. Phys. Chem. B 115 2011 319 328
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 319-328
-
-
Stumpe, M.C.1
Blinov, N.2
Pande, V.S.3
-
29
-
-
0037197848
-
Functional role of internal water molecules in rhodopsin revealed by x-ray crystallography
-
DOI 10.1073/pnas.082666399
-
T. Okada, and Y. Fujiyoshi Y. Shichida Functional role of internal water molecules in rhodopsin revealed by x-ray crystallography Proc. Natl. Acad. Sci. USA 99 2002 5982 5987 (Pubitemid 34493251)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.9
, pp. 5982-5987
-
-
Okada, T.1
Fujiyoshi, Y.2
Silow, M.3
Navarro, J.4
Landau, E.M.5
Shichida, Y.6
-
32
-
-
77956256437
-
Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle
-
J.H. Pereira, and C.Y. Ralston P.D. Adams Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle J. Biol. Chem. 285 2010 27958 27966
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 27958-27966
-
-
Pereira, J.H.1
Ralston, C.Y.2
Adams, P.D.3
-
33
-
-
0019883174
-
Affinities of amino acid side chains for solvent water
-
R. Wolfenden, and L. Andersson C.C. Southgate Affinities of amino acid side chains for solvent water Biochemistry 20 1981 849 855
-
(1981)
Biochemistry
, vol.20
, pp. 849-855
-
-
Wolfenden, R.1
Andersson, L.2
Southgate, C.C.3
-
34
-
-
33646897305
-
Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein
-
DOI 10.1016/j.cell.2006.04.027, PII S0092867406005605
-
Y.-C. Tang, and H.-C. Chang M. Hayer-Hartl Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein Cell 125 2006 903 914 (Pubitemid 43795198)
-
(2006)
Cell
, vol.125
, Issue.5
, pp. 903-914
-
-
Tang, Y.-C.1
Chang, H.-C.2
Roeben, A.3
Wischnewski, D.4
Wischnewski, N.5
Kerner, M.J.6
Hartl, F.U.7
Hayer-Hartl, M.8
-
35
-
-
44349090822
-
Essential role of the chaperonin folding compartment in vivo
-
DOI 10.1038/emboj.2008.77, PII EMBOJ200877
-
Y.-C. Tang, and H.-C. Chang M. Hayer-Hartl Essential role of the chaperonin folding compartment in vivo EMBO J. 27 2008 1458 1468 (Pubitemid 351733332)
-
(2008)
EMBO Journal
, vol.27
, Issue.10
, pp. 1458-1468
-
-
Tang, Y.-C.1
Chang, H.-C.2
Chakraborty, K.3
Hartl, F.U.4
Hayer-Hartl, M.5
-
36
-
-
22744447508
-
Proteome-wide analysis of chaperonin-dependent protein folding in Escherichia coli
-
DOI 10.1016/j.cell.2005.05.028, PII S0092867405005441
-
M.J. Kerner, and D.J. Naylor F.U. Hartl Proteome-wide analysis of chaperonin-dependent protein folding in Escherichia coli Cell 122 2005 209 220 (Pubitemid 41032985)
-
(2005)
Cell
, vol.122
, Issue.2
, pp. 209-220
-
-
Kerner, M.J.1
Naylor, D.J.2
Ishihama, Y.3
Maier, T.4
Chang, H.-C.5
Stines, A.P.6
Georgopoulos, C.7
Frishman, D.8
Hayer-Hartl, M.9
Mann, M.10
Hartl, F.U.11
-
37
-
-
84859323531
-
Sequence, structure, and function of peptide self-assembled monolayers
-
A.K. Nowinski, and F. Sun S. Jiang Sequence, structure, and function of peptide self-assembled monolayers J. Am. Chem. Soc. 134 2012 6000 6005
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 6000-6005
-
-
Nowinski, A.K.1
Sun, F.2
Jiang, S.3
-
38
-
-
68549103438
-
Ultra-low fouling peptide surfaces derived from natural amino acids
-
S. Chen, Z. Cao, and S. Jiang Ultra-low fouling peptide surfaces derived from natural amino acids Biomaterials 30 2009 5892 5896
-
(2009)
Biomaterials
, vol.30
, pp. 5892-5896
-
-
Chen, S.1
Cao, Z.2
Jiang, S.3
-
39
-
-
55549139212
-
Monolayers of 3-mercaptopropyl-amino acid to reduce the nonspecific adsorption of serum proteins on the surface of biosensors
-
O.R. Bolduc, and J.-F. Masson Monolayers of 3-mercaptopropyl-amino acid to reduce the nonspecific adsorption of serum proteins on the surface of biosensors Langmuir 24 2008 12085 12091
-
(2008)
Langmuir
, vol.24
, pp. 12085-12091
-
-
Bolduc, O.R.1
Masson, J.-F.2
|