-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
84865564418
-
Lateral gene transfer occurring in haloarchaea: an interpretative imitation study
-
Chen S, et al. 2012. Lateral gene transfer occurring in haloarchaea: an interpretative imitation study. World J. Microbiol. Biotechnol. 28:2913-2918.
-
(2012)
World J. Microbiol. Biotechnol.
, vol.28
, pp. 2913-2918
-
-
Chen, S.1
-
3
-
-
84864864464
-
Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system
-
doi:10.1038/ncomms1937
-
Datsenko KA, et al. 2012. Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system. Nat. Commun. 3:945. doi:10.1038/ncomms1937.
-
(2012)
Nat. Commun.
, vol.3
, pp. 945
-
-
Datsenko, K.A.1
-
5
-
-
84862190119
-
The bacterial CRISPR/Cas system as analog of the mammalian adaptive immune system
-
Epub ahead of print. doi:org/10.4161/rna.20177
-
Goren M, Yosef I, Edgar R, Qimron U. 1 May 2012. The bacterial CRISPR/Cas system as analog of the mammalian adaptive immune system. RNA Biol. [Epub ahead of print.] doi:org/10.4161/rna.20177.
-
(2012)
RNA Biol.
-
-
Goren, M.1
Yosef, I.2
Edgar, R.3
Qimron, U.4
-
6
-
-
0037252684
-
Rfam: an RNA family database
-
Griffiths-Jones S, Bateman A, Marshall M, Khanna A, Eddy SR. 2003. Rfam: an RNA family database. Nucleic Acids Res. 31:439-441.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 439-441
-
-
Griffiths-jones, S.1
Bateman, A.2
Marshall, M.3
Khanna, A.4
Eddy, S.R.5
-
7
-
-
34547579396
-
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
-
Grissa I, Vergnaud G, Pourcel C. 2007. CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats. Nucleic Acids Res. 35:52-57.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Grissa, I.1
Vergnaud, G.2
Pourcel, C.3
-
8
-
-
0033982936
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Kanehisa M, Goto S. 2000. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28:27-30.
-
(2000)
Nucleic Acids Res.
, vol.28
-
-
Kanehisa, M.1
Goto, S.2
-
9
-
-
33750831582
-
Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
-
doi:10.1186/1471-2105-7-474.
-
Kohany O, Gentles A, Hankus L, Jurka J. 2006. Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor. BMC Bioinformatics 7:474. doi:10.1186/1471-2105-7-474.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 474
-
-
Kohany, O.1
Gentles, A.2
Hankus, L.3
Jurka, J.4
-
10
-
-
34250665888
-
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
-
Lagesen K, et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 3100-3108
-
-
Lagesen, K.1
-
12
-
-
40749124938
-
Prophinder: a computational tool for prophage prediction in prokaryotic genomes
-
Lima-Mendez G, Van Helden J, Toussaint A, Leplae R. 2008. Prophinder: a computational tool for prophage prediction in prokaryotic genomes. Bioinformatics 24:863-865.
-
(2008)
Bioinformatics
, vol.24
, pp. 863-865
-
-
Lima-mendez, G.1
Van Helden, J.2
Toussaint, A.3
Leplae, R.4
-
13
-
-
0030854739
-
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
-
Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
14
-
-
84857917475
-
Diversity of culturable halophilic archaea isolated from Rambla Salada, Murcia (Spain)
-
Luque R, González-Domenech CM, Llamas I, Quesada E, Béjar V. 2012. Diversity of culturable halophilic archaea isolated from Rambla Salada, Murcia (Spain). Extremophiles 16:205-213.
-
(2012)
Extremophiles
, vol.16
, pp. 205-213
-
-
Luque, R.1
González-domenech, C.M.2
Llamas, I.3
Quesada, E.4
Béjar, V.5
-
15
-
-
70349303666
-
Halorubrum chaoviator sp
-
Mancinelli RL, et al. 2009. Halorubrum chaoviator sp. nov., a haloarchaeon isolated from sea salt in Baja California, Mexico, Western Australia and Naxos, Greece. Int. J. Syst. Evol. Microbiol. 59:1908-1913.
-
(2009)
nov., a haloarchaeon isolated from sea salt in Baja California, Mexico, Western Australia and Naxos, Greece. Int. J. Syst. Evol. Microbiol
, vol.59
, pp. 1908-1913
-
-
Mancinelli, R.L.1
-
16
-
-
84868344832
-
Deep sequencing analysis of phage libraries using Illumina platform
-
Epub ahead of print.
-
Matochko W, et al. 20 July 2012. Deep sequencing analysis of phage libraries using Illumina platform. Methods [Epub ahead of print.] http://dx.doi.org/10.1016/j.ymeth.2012.07.006.
-
(2012)
Methods
-
-
Matochko, W.1
-
17
-
-
64149084027
-
An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope
-
Pietilä MK, Roine E, Paulin L, Kalkkinen N, Bamford DH. 2009. An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope. Mol. Microbiol. 72:307-319.
-
(2009)
Mol. Microbiol
, vol.72
, pp. 307-319
-
-
Pietilä, M.K.1
Roine, E.2
Paulin, L.3
Kalkkinen, N.4
Bamford, D.H.5
-
18
-
-
84863226687
-
Related haloarchaeal pleomorphic viruses contain different genome types
-
Sencilo A, Paulin L, Kellner S, Helm M, Roine E. 2012. Related haloarchaeal pleomorphic viruses contain different genome types. Nucleic Acids Res. 40:5523-5534.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 5523-5534
-
-
Sencilo, A.1
Paulin, L.2
Kellner, S.3
Helm, M.4
Roine, E.5
-
19
-
-
0033956060
-
The COG database: a tool for genome-scale analysis of protein functions and evolution
-
Tatusov RL, Galperin MY, Natale DA, Koonin EV. 2000. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28:33-36.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
20
-
-
0345188663
-
Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov.
-
Ventosa A, Gutiérrez MC, Kamekura M, Dyall-Smith ML. 1999. Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 49:131-136.
-
(1999)
Int. J. Syst. Evol. Microbiol.
, vol.49
, pp. 131-136
-
-
Ventosa, A.1
Gutiérrez, M.C.2
Kamekura, M.3
Dyall-smith, M.L.4
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