Ethylene glycol metabolism by Pseudomonas putida

Applied and Environmental Microbiology

Volumn 78, Issue 24, 2012, Pages 8531-8539

  Mückschel, Björn ^a   Simon, Oliver ^b   Klebensberger, Janosch ^a   Graf, Nadja ^a   Rosche, Bettina ^c   Altenbuchner, Josef ^a   Pfannstiel, Jens ^b   Huber, Armin ^b   Hauer, Bernhard ^a  

^a UNIVERSITY OF STUTTGART   (Germany)

^b UNIVERSITY OF HOHENHEIM   (Germany)

^c UNIVERSITY OF NEW SOUTH WALES   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

COMPARATIVE PROTEOMICS; GLYCOLIC ACIDS; GLYOXYLIC ACIDS; INITIAL OXIDATION; KEY ENZYMES; PROTEOME ANALYSIS; PSEUDOMONAS PUTIDA; PSEUDOMONAS PUTIDA STRAIN; PYRROLOQUINOLINE QUINONE; SOLE SOURCE OF CARBON; SYNTHASES; WHOLE CELL BIOCATALYSTS;

EXPERIMENTS; METABOLISM; MOLECULAR BIOLOGY; MUTAGENESIS; PHYSIOLOGY; STRAIN;

ETHYLENE GLYCOL;

CARBON; ETHYLENE GLYCOL; GLYCOLIC ACID; GLYCOLIC ACID DERIVATIVE; GLYOXYLIC ACID; GLYOXYLIC ACID DERIVATIVE; PROTEOME;

BACTERIUM; CATALYST; ENZYME ACTIVITY; ETHYLENE; GROWTH RATE; METABOLISM; MUTAGENICITY;

ARTICLE; BIOTRANSFORMATION; ENERGY METABOLISM; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLIC ENGINEERING; METABOLISM; PSEUDOMONAS PUTIDA;

BIOTRANSFORMATION; CARBON; ENERGY METABOLISM; ETHYLENE GLYCOL; GLYCOLATES; GLYOXYLATES; METABOLIC ENGINEERING; METABOLIC NETWORKS AND PATHWAYS; PROTEOME; PSEUDOMONAS PUTIDA;

PSEUDOMONAS PUTIDA;

EID: 84871012757     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02062-12     Document Type: Article

References (40)

1. Acharya AS, Manning JM. 1983. Reaction of glycolaldehyde with proteins: latent crosslinking potential of alpha-hydroxyaldehydes. Proc. Natl. Acad. Sci. U. S. A. 80:3590-3594.
2. Adachi O, Ano Y, Toyama H, Matsushita K. 2007. Biooxidation with PQQ- and FAD-dependent dehydrogenases, p 1-35. In Schmid RD, Urlacher VB (ed), Modern biooxidation: enzymes, reactions, and applications. Wiley-VCH Verlag GmbH & Co KGaA, Weinheim, Germany.
3. Arias S, Olivera ER, Arcos M, Naharro G, Luengo JM. 2008. Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U. Environ. Microbiol. 10:413-432.
4. Bailey E, Hullin RP. 1966. The metabolism of glyoxylate by cell-free extracts of Pseudomonas sp. Biochem. J. 101:755-763.
5. Blackmore MA, Quayle JR. 1970. Microbial growth on oxalate by a route not involving glyoxylate carboligase. Biochem. J. 118:53-59.
6. Boronat A, Caballero E, Aguilar J. 1983. Experimental evolution of a metabolic pathway for ethylene glycol utilization by Escherichia coli. J. Bacteriol. 153:134-139.
7. Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
8. Caskey WH, Taber WA. 1981. Oxidation of ethylene glycol by a saltrequiring bacterium. Appl. Environ. Microbiol. 42:180-183.
9. Chattopadhyay A, Förster-Fromme K, Jendrossek D. 2010. PQQdependent alcohol dehydrogenase (QEDH) of Pseudomonas aeruginosa is involved in catabolism of acyclic terpenes. J. Basic Microbiol. 50:119-124.
10. Chevallet M, et al. 2008. Sweet silver: a formaldehyde-free silver staining using aldoses as developing agents, with enhanced compatibility with mass spectrometry. Proteomics 8:4853-4861.
11. Child J, Willetts A. 1978. Microbial metabolism of aliphatic glycols. Bacterial metabolism of ethylene glycol. Biochim. Biophys. Acta 538:316-327.
12. Duine JA, Jongejan JA. 1989. Quinoproteins, enzymes with pyrroloquinoline quinone as cofactor. Annu. Rev. Biochem. 58:403-426.
13. Fincher EL, Payne WJ. 1962. Bacterial utilization of ether glycols. Appl. Environ. Microbiol. 10:542-547.
14. Gaston LW, Stadtman ER. 1962. Fermentation of ethylene glycol by Clostridium glycolicum, sp. n. J. Bacteriol. 85:356-362.
15. Gavagan JE, et al. 1995. Glyoxylic acid production using microbial transformant catalysts. J. Org. Chem. 60:3957-3963.
16. Gliese N. 2004. AgmR controls transcription of a regulon with several operons essential for ethanol oxidation in Pseudomonas aeruginosa ATCC 17933. Microbiology 150:1851-1857.
17. Gonzalez CF, Taber WA, Zeitoun MA. 1972. Biodegradation of ethylene glycol by a salt-requiring bacterium. Appl. Microbiol. 24:911-919.
18. Görisch H. 2003. The ethanol oxidation system and its regulation in Pseudomonas aeruginosa. Biochim. Biophys. Acta 1647:98-102.
19. Gould TA, van de Langemheen H, Muñoz-Elías EJ, McKinney JD, Sacchettini JC. 2006. Dual role of isocitrate lyase 1 in the glyoxylate and methylcitrate cycles in Mycobacterium tuberculosis. Mol. Microbiol. 61: 940-947.
20. Graf N, Altenbuchner J. 2011. Development of a method for markerless gene deletion in Pseudomonas putida. Appl. Environ. Microbiol. 77:5549-5552.
21. Isobe K. 1995. Oxidation of ethylene glycol and glycolic acid by glycerol oxidase. Biosci. Biotechnol. Biochem. 59:576-581.
22. Isobe K, Nishise H. 1995. A new enzymatic method for glycolaldehyde production from ethylene glycol. J. Mol. Catal. B Enzym. 1:37-43.
23. Kataoka M, Sasaki M, Hidalgo AR, Nakano M, Shimizu S. 2001. Glycolic acid production using ethylene glycol-oxidizing microorganisms. Biosci. Biotechnol. Biochem. 65:2265-2270.
24. Kornberg HL, Gotto AM. 1961. The metabolism of C2 compounds in microorganisms. 6. Synthesis of cell constituents from glycollate by Pseudomonas sp. Biochem. J. 78:69-82.
25. Kornberg HL, Morris JG. 1965. The utilization of glycolate by Micrococcus denitrificans: the _-hydroxyaspartate pathway. Biochem. J. 95:577-586.
26. Kornberg HL. 1961. Metabolism of C2 compounds in microorganisms. 8. A dicarboxylic acid cycle as a route for the oxidation of glycollate by Escherichia coli. Biochem. J. 81:503-513.
27. Kretzschmar U, Khodaverdi V, Jeoung JH, Görisch H. 2008. Function and transcriptional regulation of the isocitrate lyase in Pseudomonas aeruginosa. Arch. Microbiol. 190:151-158.
28. Li XZ, Klebensberger J, Rosche B. 2010. Effect of gcl, glcB and aceA disruption on glyoxylate conversion by Pseudomonas putida JM37. J. Microbiol. Biotechnol. 20:1006-1010.
29. Mattioda G, Christidis Y. 2000. Glyoxylic acid, p 89-92. In Bohnet M, Brinker CG, Cornils B (ed), Ullmann's encyclopedia of industrial chemistry. Wiley-VCH Verlag GmbH & Co KGaA, Weinheim, Germany. doi: 10.1002/14356007.a12_495.
30. Mern DS, Ha SW, Khodaverdi V, Gliese N, Gorisch H. 2010. A complex regulatory network controls aerobic ethanol oxidation in Pseudomonas aeruginosa: indication of four levels of sensor kinases and response regulators. Microbiology 156:1505-1516.
31. Pfennig N, Lippert KD. 1966. Ü ber das Vitamin B12-Bedürfnis phototropher Schwefelbakterien. Arch. Microbiol. 55:245-256.
32. Promden W, Vangnai AS, Toyama H, Matsushita K, Pongsawasdi P. 2009. Analysis of the promoter activities of the genes encoding three quinoprotein alcohol dehydrogenases in Pseudomonas putida HK5. Microbiology 155:594-603.
33. Rupp M, Görisch H. 1988. Purification, crystallisation and characterization of quinoprotein ethanol dehydrogenase from Pseudomonas aeruginosa. Biol. Chem. Hoppe-Seyler 369:431-439.
34. Sajtos A. May 1991. Process for the preparation of glyoxylic acid and glyoxylic acid derivates. US patent 5,015,760.
35. Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
36. Schobert M, Görisch H. 2001. A soluble two-component regulatory system controls expression of quinoprotein ethanol dehydrogenase (QEDH) but not expression of cytochrome c550 of the ethanol-oxidation system in Pseudomonas aeruginosa. Microbiology 147(Pt 2):363-372.
37. Shevchenko A, Tomas H, Havlis J, Olsen JV, Mann M. 2007. In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat. Protoc. 1:2856-2860.
38. Wiegant W, de Bont J. 1980. A new route for ethylene glycol metabolism in Mycobacterium E44. Microbiology 120:325-331.
39. Yadav G, Gupta V. 2000. Synthesis of glyoxalic acid from glyoxal. Process Biochem. 36:73-78.
40. Yanisch-Perron C, Vieira J, Messing J. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.